Click here to switch to the map view.

The map label for this gene is 167622084

Identifier: 167622084

GI number: 167622084

Start: 161411

End: 162193

Strand: Direct

Name: 167622084

Synonym: Shal_0143

Alternate gene names: NA

Gene position: 161411-162193 (Clockwise)

Preceding gene: 167622083

Following gene: 167622091

Centisome position: 3.09

GC content: 37.42

Gene sequence:

>783_bases
ATGGATAATAATTTAGTTAATGTGTGTTATGAAGGTACTTCTGGTGAAACTGATATTAGAACGCTTTACATAGATAACAT
ACTTCATTTTTCGCTAAATGATGTTTTTATTCTTTTAAATAAAGAAAACAAAGGCATGGGGGAAAGGAATCCTGCAAGAT
ATATCCCTAATTTAATAAAAAGCCAAATCCATGATTTAGATGACGATGAATTTAAGAATCTGCCACATCCAAAACCAACT
CCAGGGTTAGAAGTGGAAACTTTTGTCACCCAACCAGGATTAAACCGTGTAATGGGGTCTGATGACTCTCCAGCAGGTCG
TAAATTTCAGCGTTGGTTGTATCACGATGTTGTACCCTCGTTAACGAAGCATGGAGTATATCCCGCACCTATAACTCCGC
AAGGTTCTGCTTTATCACAAATGGCTGAAATTATTGCTCAAAACTCAAGAGCTCTAGCTGATACGATTCTAAAACAGGAT
AAACTAGAGCAGGAAGTAAAGGCTGTTAGTGGTGATATTTCTGAAGTAAAAGAACGTATTGAAAAACTTGAAAGTAGTAA
TTCTCAAAATGAATATAGACTTACTGTACGGCAGTGGTTTGATAATCAGGTTTTGGCTTTATCAAGTGCTAAGGAATTGG
AAATAGTTACGTGGTGCGAGAATTTAAGCCTTCGTCATAATAAGCCAAGGTTGGGTTGCCCTTCTGGAGAGCGTTTAGCT
GCAAGGTTTTTTGAAGAGGTTATTATTGATGCTAAATCACTAGTTGAAAGGGCTCGTGGCTAA

Upstream 100 bases:

>100_bases
TTACTTAGTGGTGATAACGTGGGTTGGATATTAAGAGGGAATCATGCCGCTATAGAATAAACTTTAGTGGGGTTTATGAA
ACATTGGAGTTAGCTTTTAG

Downstream 100 bases:

>100_bases
TTTATTTCTGGGGACGTAGCCCTAAATAAAACAAAACCCGACAGTGACGTCGGGTTTTGTGTATATAGCACAAGCTAACA
ATCAAACTCTGTGGCTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDNNLVNVCYEGTSGETDIRTLYIDNILHFSLNDVFILLNKENKGMGERNPARYIPNLIKSQIHDLDDDEFKNLPHPKPT
PGLEVETFVTQPGLNRVMGSDDSPAGRKFQRWLYHDVVPSLTKHGVYPAPITPQGSALSQMAEIIAQNSRALADTILKQD
KLEQEVKAVSGDISEVKERIEKLESSNSQNEYRLTVRQWFDNQVLALSSAKELEIVTWCENLSLRHNKPRLGCPSGERLA
ARFFEEVIIDAKSLVERARG

Sequences:

>Translated_260_residues
MDNNLVNVCYEGTSGETDIRTLYIDNILHFSLNDVFILLNKENKGMGERNPARYIPNLIKSQIHDLDDDEFKNLPHPKPT
PGLEVETFVTQPGLNRVMGSDDSPAGRKFQRWLYHDVVPSLTKHGVYPAPITPQGSALSQMAEIIAQNSRALADTILKQD
KLEQEVKAVSGDISEVKERIEKLESSNSQNEYRLTVRQWFDNQVLALSSAKELEIVTWCENLSLRHNKPRLGCPSGERLA
ARFFEEVIIDAKSLVERARG
>Mature_260_residues
MDNNLVNVCYEGTSGETDIRTLYIDNILHFSLNDVFILLNKENKGMGERNPARYIPNLIKSQIHDLDDDEFKNLPHPKPT
PGLEVETFVTQPGLNRVMGSDDSPAGRKFQRWLYHDVVPSLTKHGVYPAPITPQGSALSQMAEIIAQNSRALADTILKQD
KLEQEVKAVSGDISEVKERIEKLESSNSQNEYRLTVRQWFDNQVLALSSAKELEIVTWCENLSLRHNKPRLGCPSGERLA
ARFFEEVIIDAKSLVERARG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29386; Mature: 29386

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNLVNVCYEGTSGETDIRTLYIDNILHFSLNDVFILLNKENKGMGERNPARYIPNLIK
CCCCEEEEEECCCCCCCCEEEEEEHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHH
SQIHDLDDDEFKNLPHPKPTPGLEVETFVTQPGLNRVMGSDDSPAGRKFQRWLYHDVVPS
HHHHCCCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHH
LTKHGVYPAPITPQGSALSQMAEIIAQNSRALADTILKQDKLEQEVKAVSGDISEVKERI
HHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EKLESSNSQNEYRLTVRQWFDNQVLALSSAKELEIVTWCENLSLRHNKPRLGCPSGERLA
HHHHCCCCCCCEEEHHHHHCCCCEEEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCHHHH
ARFFEEVIIDAKSLVERARG
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNNLVNVCYEGTSGETDIRTLYIDNILHFSLNDVFILLNKENKGMGERNPARYIPNLIK
CCCCEEEEEECCCCCCCCEEEEEEHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHH
SQIHDLDDDEFKNLPHPKPTPGLEVETFVTQPGLNRVMGSDDSPAGRKFQRWLYHDVVPS
HHHHCCCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHH
LTKHGVYPAPITPQGSALSQMAEIIAQNSRALADTILKQDKLEQEVKAVSGDISEVKERI
HHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EKLESSNSQNEYRLTVRQWFDNQVLALSSAKELEIVTWCENLSLRHNKPRLGCPSGERLA
HHHHCCCCCCCEEEHHHHHCCCCEEEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCHHHH
ARFFEEVIIDAKSLVERARG
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA