Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167621952

Identifier: 167621952

GI number: 167621952

Start: 15903

End: 16085

Strand: Reverse

Name: 167621952

Synonym: Shal_0011

Alternate gene names: NA

Gene position: 16085-15903 (Counterclockwise)

Preceding gene: 167621953

Following gene: 167621951

Centisome position: 0.31

GC content: 48.63

Gene sequence:

>183_bases
ATGGCCAAATTAATCGGTATCGCATTTAAGGCTGAGAAACGCGCCGCGATGATCTCGGTAGCACAAGCCGAGGTCACTCA
AGCCAGAGGCGTCGAAGAGGATATCTTTGGGCGCCCTAGCAATCGCCACATTAACCAAAGTGCTCATATCCAGCTCAATG
ATTATGTTAGCTTAACCGGTTAA

Upstream 100 bases:

>100_bases
CACACATTAATCGCCAGTCAAACAGAGTCAACGCCATACCAGTACCTTATAAAGAAAGGTCTGTAGTCATTAGTTGGTGA
ACTAGATAAAGGGAATTATC

Downstream 100 bases:

>100_bases
AGCTTCTCATACACTAAGCTCAAAAGACTCCTCAAAAAAACGCCCCTCACTAATCAAAACACTGAACCAGAGCCACAAAC
CTTTTATTGGTTGCTTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MAKLIGIAFKAEKRAAMISVAQAEVTQARGVEEDIFGRPSNRHINQSAHIQLNDYVSLTG

Sequences:

>Translated_60_residues
MAKLIGIAFKAEKRAAMISVAQAEVTQARGVEEDIFGRPSNRHINQSAHIQLNDYVSLTG
>Mature_59_residues
AKLIGIAFKAEKRAAMISVAQAEVTQARGVEEDIFGRPSNRHINQSAHIQLNDYVSLTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6554; Mature: 6422

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLIGIAFKAEKRAAMISVAQAEVTQARGVEEDIFGRPSNRHINQSAHIQLNDYVSLTG
CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEEECCEEEECC
>Mature Secondary Structure 
AKLIGIAFKAEKRAAMISVAQAEVTQARGVEEDIFGRPSNRHINQSAHIQLNDYVSLTG
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA