| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167621952
Identifier: 167621952
GI number: 167621952
Start: 15903
End: 16085
Strand: Reverse
Name: 167621952
Synonym: Shal_0011
Alternate gene names: NA
Gene position: 16085-15903 (Counterclockwise)
Preceding gene: 167621953
Following gene: 167621951
Centisome position: 0.31
GC content: 48.63
Gene sequence:
>183_bases ATGGCCAAATTAATCGGTATCGCATTTAAGGCTGAGAAACGCGCCGCGATGATCTCGGTAGCACAAGCCGAGGTCACTCA AGCCAGAGGCGTCGAAGAGGATATCTTTGGGCGCCCTAGCAATCGCCACATTAACCAAAGTGCTCATATCCAGCTCAATG ATTATGTTAGCTTAACCGGTTAA
Upstream 100 bases:
>100_bases CACACATTAATCGCCAGTCAAACAGAGTCAACGCCATACCAGTACCTTATAAAGAAAGGTCTGTAGTCATTAGTTGGTGA ACTAGATAAAGGGAATTATC
Downstream 100 bases:
>100_bases AGCTTCTCATACACTAAGCTCAAAAGACTCCTCAAAAAAACGCCCCTCACTAATCAAAACACTGAACCAGAGCCACAAAC CTTTTATTGGTTGCTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MAKLIGIAFKAEKRAAMISVAQAEVTQARGVEEDIFGRPSNRHINQSAHIQLNDYVSLTG
Sequences:
>Translated_60_residues MAKLIGIAFKAEKRAAMISVAQAEVTQARGVEEDIFGRPSNRHINQSAHIQLNDYVSLTG >Mature_59_residues AKLIGIAFKAEKRAAMISVAQAEVTQARGVEEDIFGRPSNRHINQSAHIQLNDYVSLTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6554; Mature: 6422
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLIGIAFKAEKRAAMISVAQAEVTQARGVEEDIFGRPSNRHINQSAHIQLNDYVSLTG CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEEECCEEEECC >Mature Secondary Structure AKLIGIAFKAEKRAAMISVAQAEVTQARGVEEDIFGRPSNRHINQSAHIQLNDYVSLTG CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA