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The map label for this gene is ytsP [H]

Identifier: 167040691

GI number: 167040691

Start: 2079071

End: 2079535

Strand: Reverse

Name: ytsP [H]

Synonym: Teth514_2068

Alternate gene names: 167040691

Gene position: 2079535-2079071 (Counterclockwise)

Preceding gene: 167040692

Following gene: 167040690

Centisome position: 84.63

GC content: 33.55

Gene sequence:

>465_bases
ATGGAAAAAAGAAAAGTTTTTGATGACTTATTAGTTAGGATTGACCAAAAGGCAAGAGAAATTGATGATATGGATGAATT
TTATGGTGAAGTTGTTAAGATATTAGCAGACAATGTTCCTTACTACAATTGGACAGGTTTTTATTTCATGAAGGATGGAG
AGTTAGTAATAGGACCTTATATTGGTAGACCTACAGAGCATGTGAGAATTAAAGTAGGACAGGGAGTTTGTGGAAGAGCT
GTTGCAGAAAAAAATACTATAATTGTTGATGATGTCACTAAAGAAGACAATTATCTTGCCTGCAGCCTTGAGACGAAATC
GGAAATTGTAGTGCCAATATGGGCTAATGGCGACATAATAGGAGAAATAGATATTGACAGCGATGATTTAGCTGCTTTTG
ATGAAGAAGATAAAAGATTTTTAGAAAAAGTTGCAGAAATTATAAGTCGAAAACTCAAAAAATAG

Upstream 100 bases:

>100_bases
ATTATCGATCCAGATATAGTGGTAAAAAAGAACTACTTTATTTTACAATATTTTAATGGTAAAATTATATTGATAAATTT
TTTACAGAGGAGCTGAAAAG

Downstream 100 bases:

>100_bases
ATTTCCATTGATTTTTTGTGGTATAATAATTGTGTCAGGAAGGAGGATAGGCTATGAGAGAAAGAGTAGAAGAAGTATTA
GAGCTTCTAAGGCCATCTCT

Product: putative GAF sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MEKRKVFDDLLVRIDQKAREIDDMDEFYGEVVKILADNVPYYNWTGFYFMKDGELVIGPYIGRPTEHVRIKVGQGVCGRA
VAEKNTIIVDDVTKEDNYLACSLETKSEIVVPIWANGDIIGEIDIDSDDLAAFDEEDKRFLEKVAEIISRKLKK

Sequences:

>Translated_154_residues
MEKRKVFDDLLVRIDQKAREIDDMDEFYGEVVKILADNVPYYNWTGFYFMKDGELVIGPYIGRPTEHVRIKVGQGVCGRA
VAEKNTIIVDDVTKEDNYLACSLETKSEIVVPIWANGDIIGEIDIDSDDLAAFDEEDKRFLEKVAEIISRKLKK
>Mature_154_residues
MEKRKVFDDLLVRIDQKAREIDDMDEFYGEVVKILADNVPYYNWTGFYFMKDGELVIGPYIGRPTEHVRIKVGQGVCGRA
VAEKNTIIVDDVTKEDNYLACSLETKSEIVVPIWANGDIIGEIDIDSDDLAAFDEEDKRFLEKVAEIISRKLKK

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=110, Percent_Identity=40.9090909090909, Blast_Score=89, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6322781, Length=113, Percent_Identity=47.787610619469, Blast_Score=98, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17637; Mature: 17637

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRKVFDDLLVRIDQKAREIDDMDEFYGEVVKILADNVPYYNWTGFYFMKDGELVIGPY
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCEEEEEECCCEEEECC
IGRPTEHVRIKVGQGVCGRAVAEKNTIIVDDVTKEDNYLACSLETKSEIVVPIWANGDII
CCCCCCEEEEEECCCCCCCHHCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEE
GEIDIDSDDLAAFDEEDKRFLEKVAEIISRKLKK
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKRKVFDDLLVRIDQKAREIDDMDEFYGEVVKILADNVPYYNWTGFYFMKDGELVIGPY
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCEEEEEECCCEEEECC
IGRPTEHVRIKVGQGVCGRAVAEKNTIIVDDVTKEDNYLACSLETKSEIVVPIWANGDII
CCCCCCEEEEEECCCCCCCHHCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEE
GEIDIDSDDLAAFDEEDKRFLEKVAEIISRKLKK
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]