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The map label for this gene is spoIIGA [H]

Identifier: 167040625

GI number: 167040625

Start: 2010533

End: 2011363

Strand: Reverse

Name: spoIIGA [H]

Synonym: Teth514_2002

Alternate gene names: 167040625

Gene position: 2011363-2010533 (Counterclockwise)

Preceding gene: 167040626

Following gene: 167040624

Centisome position: 81.85

GC content: 26.59

Gene sequence:

>831_bases
ATGTATTTAGACGTAATTTTTTTCGAAAATTTAATTATTAACTATTTTATTTTATCCCTTACACGAAAATTTTCTAAAAA
AGACAGCAAACCTATTAAACTTTTTTTAGGTGCATTATTGGGAGCCTGTTATGTCCTAATAATTTTTTTGTTACCTTATA
AGATGATTCATGAAGTTTTCGCAAAAATTATTTTATCTCTCTTAATAATATATATGGCATTTACTCCAAAAACATTAAAA
GAATTTTTGAGAATTTTAGCAGTTTTTTATCTAATTTCTTTTGCAATAGGTGGGACAATTTTTGCGGTTTTATATACAGC
AAAACTTAATTTACATAGTTTATGGATTGGAATATTGATAGCTATTTTACTTTTCTATACTAATTGGGATTATATAGTGA
GAAAATCAAAAGAGGAAAAAATGTTATACAGCATAAAAATAGAAATTTTTCAAAAACAAATAGAGATAAAAGGATTGTTA
GATACTGGAAATAGATTATACGACCCTTTAACTAAATCGCCTGTTGTGGTAGTGGAGTTTTTGGCTATGAAAAATATACT
TCCTGATAATATGGAAATTTTATTAAATGAAGAGAAGATAGATTTTAACAAAATTTTTGAAGTTTTGAAAGAGGAAAGAT
GGTTATCAAGGATAAGGTTAATACCCTTTATATCAGTAGGACAGTCTAAAGGAATAATGTTAGGATTTAAGCCAGATAAA
TTAGTGGTAGGTGAAAAAGAGATAAGGAATGTAATAGTAGGAGTATACAAAAGCCAAATAGATAAATATGGTAATTATGC
GGCGTTGTTAGCACCAGAAATTTTAGTATAA

Upstream 100 bases:

>100_bases
TTACAATAAATTTGAGATTTTTATTTTATAATATGAATAAAATAGGCAAATGGGAATATACATTGTATAAGGATTAAAAG
TGTCCCCGGGGATGGTATGA

Downstream 100 bases:

>100_bases
TGGGGGTGTTGGAAGTGCAACTAAAAACAAAAGTAAAAATAGAAATGCTATTGTTGTGGAAAAAAATCCTTGATTTTTTA
GATTTATCTGAAGGCATATT

Product: peptidase U4, sporulation factor SpoIIGA

Products: NA

Alternate protein names: Stage II sporulation protein GA [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MYLDVIFFENLIINYFILSLTRKFSKKDSKPIKLFLGALLGACYVLIIFLLPYKMIHEVFAKIILSLLIIYMAFTPKTLK
EFLRILAVFYLISFAIGGTIFAVLYTAKLNLHSLWIGILIAILLFYTNWDYIVRKSKEEKMLYSIKIEIFQKQIEIKGLL
DTGNRLYDPLTKSPVVVVEFLAMKNILPDNMEILLNEEKIDFNKIFEVLKEERWLSRIRLIPFISVGQSKGIMLGFKPDK
LVVGEKEIRNVIVGVYKSQIDKYGNYAALLAPEILV

Sequences:

>Translated_276_residues
MYLDVIFFENLIINYFILSLTRKFSKKDSKPIKLFLGALLGACYVLIIFLLPYKMIHEVFAKIILSLLIIYMAFTPKTLK
EFLRILAVFYLISFAIGGTIFAVLYTAKLNLHSLWIGILIAILLFYTNWDYIVRKSKEEKMLYSIKIEIFQKQIEIKGLL
DTGNRLYDPLTKSPVVVVEFLAMKNILPDNMEILLNEEKIDFNKIFEVLKEERWLSRIRLIPFISVGQSKGIMLGFKPDK
LVVGEKEIRNVIVGVYKSQIDKYGNYAALLAPEILV
>Mature_276_residues
MYLDVIFFENLIINYFILSLTRKFSKKDSKPIKLFLGALLGACYVLIIFLLPYKMIHEVFAKIILSLLIIYMAFTPKTLK
EFLRILAVFYLISFAIGGTIFAVLYTAKLNLHSLWIGILIAILLFYTNWDYIVRKSKEEKMLYSIKIEIFQKQIEIKGLL
DTGNRLYDPLTKSPVVVVEFLAMKNILPDNMEILLNEEKIDFNKIFEVLKEERWLSRIRLIPFISVGQSKGIMLGFKPDK
LVVGEKEIRNVIVGVYKSQIDKYGNYAALLAPEILV

Specific function: Seems to be responsible for the processing of the sigma E factor (spoIIGB) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005081 [H]

Pfam domain/function: PF03419 Peptidase_U4 [H]

EC number: NA

Molecular weight: Translated: 31980; Mature: 31980

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLDVIFFENLIINYFILSLTRKFSKKDSKPIKLFLGALLGACYVLIIFLLPYKMIHEVF
CEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKIILSLLIIYMAFTPKTLKEFLRILAVFYLISFAIGGTIFAVLYTAKLNLHSLWIGILI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILLFYTNWDYIVRKSKEEKMLYSIKIEIFQKQIEIKGLLDTGNRLYDPLTKSPVVVVEF
HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHH
LAMKNILPDNMEILLNEEKIDFNKIFEVLKEERWLSRIRLIPFISVGQSKGIMLGFKPDK
HHHHCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCC
LVVGEKEIRNVIVGVYKSQIDKYGNYAALLAPEILV
EEECHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHCC
>Mature Secondary Structure
MYLDVIFFENLIINYFILSLTRKFSKKDSKPIKLFLGALLGACYVLIIFLLPYKMIHEVF
CEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKIILSLLIIYMAFTPKTLKEFLRILAVFYLISFAIGGTIFAVLYTAKLNLHSLWIGILI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILLFYTNWDYIVRKSKEEKMLYSIKIEIFQKQIEIKGLLDTGNRLYDPLTKSPVVVVEF
HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHH
LAMKNILPDNMEILLNEEKIDFNKIFEVLKEERWLSRIRLIPFISVGQSKGIMLGFKPDK
HHHHCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCC
LVVGEKEIRNVIVGVYKSQIDKYGNYAALLAPEILV
EEECHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3125985; 2106671; 9384377 [H]