BacMap

Definition	Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession	NC_010320
Length	2,457,259

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The map label for this gene is yfiL [H]

Identifier: 167040597

GI number: 167040597

Start: 1983280

End: 1983786

Strand: Reverse

Name: yfiL [H]

Synonym: Teth514_1971

Alternate gene names: 167040597

Gene position: 1983786-1983280 (Counterclockwise)

Preceding gene: 167040598

Following gene: 167040596

Centisome position: 80.73

GC content: 33.33

Gene sequence:

>507_bases
ATGCCTTTTTCTGTTGAAGTTAAAAATCTAAGGAAGCTTTTTGGAAAGTATGAAGCAGTTGCAGGTATAAGTTTTACCAT
AAACGAAGGAGAAGTTTTTGGTTTATTGGGACCTAATGGAGCAGGAAAAACAACTACAATTCGTATGATAACTACGCTTT
TGCCTCCGACATCAGGCGAAATCAAAATAGAGGGAATAAATGTTATAAAAAATGGAGGTTATATTCGAAATTTAATAGGA
TATGTACCGCAAGCCTTATCAGCCGATTCAACTTTAACAGGGTATGAAAATCTTCTAATTGTTGCAAAATTATTGCGCTT
ACCTAAAAAAGAGAGAGAAGAAAGGATTAATCATATTCTTGACATATTAAATTTAAGTGAAGCAGCAAACAGGATTGTCA
AAGAGTACTCTGGTGGTATGGTTAGAAAACTGGAAATCGGCCAGGCATTAATACATAAATCCTCTGAGTTATATTGTAGA
ACTTTTAAGAGGATATTTATTAAATAG

Upstream 100 bases:

>100_bases
GACTTGACGTAGAACGTCTAAACAGGGATTTGAGGTTAATTTGGAATCAATTGAAAGAATGTGAGACTTGCTAAATTTTA
ATTTGGAAGCAGGTGTTTAT

Downstream 100 bases:

>100_bases
TCCTATACCAAATGCAGGCTTGGATTGGCTAATAATAATATTCATAACTGTTATTTTGCAATTATGTGCCGCATTATTAT
ATCCAAGAATCGTTGTATGA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MPFSVEVKNLRKLFGKYEAVAGISFTINEGEVFGLLGPNGAGKTTTIRMITTLLPPTSGEIKIEGINVIKNGGYIRNLIG
YVPQALSADSTLTGYENLLIVAKLLRLPKKEREERINHILDILNLSEAANRIVKEYSGGMVRKLEIGQALIHKSSELYCR
TFKRIFIK

Sequences:

>Translated_168_residues
MPFSVEVKNLRKLFGKYEAVAGISFTINEGEVFGLLGPNGAGKTTTIRMITTLLPPTSGEIKIEGINVIKNGGYIRNLIG
YVPQALSADSTLTGYENLLIVAKLLRLPKKEREERINHILDILNLSEAANRIVKEYSGGMVRKLEIGQALIHKSSELYCR
TFKRIFIK
>Mature_167_residues
PFSVEVKNLRKLFGKYEAVAGISFTINEGEVFGLLGPNGAGKTTTIRMITTLLPPTSGEIKIEGINVIKNGGYIRNLIGY
VPQALSADSTLTGYENLLIVAKLLRLPKKEREERINHILDILNLSEAANRIVKEYSGGMVRKLEIGQALIHKSSELYCRT
FKRIFIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI116734710, Length=157, Percent_Identity=38.2165605095541, Blast_Score=95, Evalue=3e-20,
Organism=Homo sapiens, GI105990541, Length=133, Percent_Identity=39.8496240601504, Blast_Score=90, Evalue=8e-19,
Organism=Homo sapiens, GI31657092, Length=150, Percent_Identity=39.3333333333333, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI45446740, Length=156, Percent_Identity=33.974358974359, Blast_Score=84, Evalue=4e-17,
Organism=Homo sapiens, GI47078218, Length=156, Percent_Identity=33.974358974359, Blast_Score=84, Evalue=4e-17,
Organism=Homo sapiens, GI30795238, Length=153, Percent_Identity=37.9084967320261, Blast_Score=82, Evalue=2e-16,
Organism=Homo sapiens, GI27881501, Length=153, Percent_Identity=37.9084967320261, Blast_Score=82, Evalue=2e-16,
Organism=Homo sapiens, GI150417984, Length=147, Percent_Identity=36.734693877551, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI153792144, Length=154, Percent_Identity=34.4155844155844, Blast_Score=80, Evalue=6e-16,
Organism=Homo sapiens, GI27436953, Length=126, Percent_Identity=36.5079365079365, Blast_Score=80, Evalue=8e-16,
Organism=Homo sapiens, GI21536376, Length=157, Percent_Identity=33.7579617834395, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI6005701, Length=126, Percent_Identity=37.3015873015873, Blast_Score=78, Evalue=3e-15,
Organism=Homo sapiens, GI27477115, Length=126, Percent_Identity=38.0952380952381, Blast_Score=77, Evalue=7e-15,
Organism=Homo sapiens, GI27262624, Length=146, Percent_Identity=32.8767123287671, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI27262626, Length=146, Percent_Identity=32.8767123287671, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI87081782, Length=154, Percent_Identity=33.7662337662338, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI48994943, Length=154, Percent_Identity=33.1168831168831, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1789593, Length=150, Percent_Identity=35.3333333333333, Blast_Score=87, Evalue=4e-19,
Organism=Escherichia coli, GI87081791, Length=146, Percent_Identity=31.5068493150685, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1788761, Length=154, Percent_Identity=31.8181818181818, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI1789672, Length=153, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786319, Length=154, Percent_Identity=33.1168831168831, Blast_Score=81, Evalue=3e-17,
Organism=Escherichia coli, GI87081709, Length=149, Percent_Identity=32.8859060402685, Blast_Score=81, Evalue=3e-17,
Organism=Escherichia coli, GI1788165, Length=153, Percent_Identity=32.6797385620915, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1787029, Length=150, Percent_Identity=32.6666666666667, Blast_Score=71, Evalue=3e-14,
Organism=Escherichia coli, GI1787370, Length=149, Percent_Identity=29.5302013422819, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1790467, Length=152, Percent_Identity=30.9210526315789, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1787712, Length=153, Percent_Identity=28.7581699346405, Blast_Score=67, Evalue=5e-13,
Organism=Escherichia coli, GI1789032, Length=179, Percent_Identity=26.8156424581006, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1788450, Length=152, Percent_Identity=28.2894736842105, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1786398, Length=163, Percent_Identity=25.7668711656442, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1786872, Length=150, Percent_Identity=31.3333333333333, Blast_Score=63, Evalue=9e-12,
Organism=Escherichia coli, GI1787089, Length=157, Percent_Identity=28.6624203821656, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788225, Length=157, Percent_Identity=29.9363057324841, Blast_Score=61, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=143, Percent_Identity=34.965034965035, Blast_Score=97, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17510237, Length=149, Percent_Identity=36.241610738255, Blast_Score=91, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI115533608, Length=157, Percent_Identity=36.9426751592357, Blast_Score=89, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71983523, Length=145, Percent_Identity=36.551724137931, Blast_Score=84, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71983516, Length=145, Percent_Identity=36.551724137931, Blast_Score=84, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71983510, Length=145, Percent_Identity=36.551724137931, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28574150, Length=154, Percent_Identity=37.012987012987, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI116007328, Length=154, Percent_Identity=37.012987012987, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24643674, Length=155, Percent_Identity=33.5483870967742, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24666092, Length=155, Percent_Identity=32.258064516129, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI221512771, Length=156, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=4e-16,
Organism=Drosophila melanogaster, GI85725262, Length=159, Percent_Identity=30.8176100628931, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28573571, Length=152, Percent_Identity=28.2894736842105, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28573573, Length=152, Percent_Identity=28.2894736842105, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24648314, Length=155, Percent_Identity=26.4516129032258, Blast_Score=66, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24650853, Length=154, Percent_Identity=29.2207792207792, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650855, Length=154, Percent_Identity=29.2207792207792, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221500365, Length=133, Percent_Identity=32.3308270676692, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007184, Length=133, Percent_Identity=32.3308270676692, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281362751, Length=154, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 18678; Mature: 18547

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSVEVKNLRKLFGKYEAVAGISFTINEGEVFGLLGPNGAGKTTTIRMITTLLPPTSGE
CCCCCHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
IKIEGINVIKNGGYIRNLIGYVPQALSADSTLTGYENLLIVAKLLRLPKKEREERINHIL
EEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
DILNLSEAANRIVKEYSGGMVRKLEIGQALIHKSSELYCRTFKRIFIK
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PFSVEVKNLRKLFGKYEAVAGISFTINEGEVFGLLGPNGAGKTTTIRMITTLLPPTSGE
CCCCHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
IKIEGINVIKNGGYIRNLIGYVPQALSADSTLTGYENLLIVAKLLRLPKKEREERINHIL
EEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
DILNLSEAANRIVKEYSGGMVRKLEIGQALIHKSSELYCRTFKRIFIK
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]