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The map label for this gene is pduB [H]

Identifier: 167040583

GI number: 167040583

Start: 1963420

End: 1964217

Strand: Reverse

Name: pduB [H]

Synonym: Teth514_1954

Alternate gene names: 167040583

Gene position: 1964217-1963420 (Counterclockwise)

Preceding gene: 167040584

Following gene: 167040582

Centisome position: 79.94

GC content: 41.1

Gene sequence:

>798_bases
ATGGATGAACAAGTAATCAAAAAAGTAGTCGAAGATGTATTGAAAAAAGTAGGAATAGAGCAAAAAGAAGAAAATAAAGC
AAATAGAGGAGAGCCAGTAATTACAAATCCAGGCTTGACTGAATTTGTAGGTACTGCACTAGGTGACACAATTGGATTGG
TAATTGCAAATGTGGATGCTTCTTTGCATGAGAAAATGGGAATTGACCCAAAGTATCGTTCTATAGGAATAATTGGTGGT
CGTACAGGAGCAGGACCACAAATAATGGCTGCGGATGAAGCAGTAAAAGCTACAAACACAGAAGTAGTTGCTATTGAATT
GCCAAGGGATACGAAAGGTGGCGCTGGACATGGGAACCTTATCATCTTCGGTGCAGAAGAAGTCTCGGATGCAAGAAGAG
CAGTAGAGGTTGCATTGAAAGAGCTGAGACGCACCTTTGGCGATGTATATGTAAACGAAGCTGGACATTTAGAATTCCAG
TATACTGCAAGAGCAAGCTATGCATTGCAAAAAGCATTTGGAGCTCCGTTAGGAAAGGCATTTGGATTGATTGTGGGAGC
ACCAGCTGCAATTGGAGTATTATGCTGTGATACTGCTGTAAAGGCAGCAGAAGTAGAAGTTATTGGCTATGCTAGTCCAG
CAAAAGGTACCAGTATGACAAATGAGGCGATATTATTTATTTCAGGAGATTCTGGAGCAGTGAGACAAGCTATTATTGCT
GCAAGAGAAGTGGGATTGAAGCTTCTAAGTACACTTGGAGAGGCACCAAAATCTCTGAGTGGTGAACCTTATATTTAA

Upstream 100 bases:

>100_bases
TGTCCATGTAATTCCAAGACCTCACGCAGATGTTGAGAAGATTCTTCCTAAAGCTGAAGAGTAAAAATTTTATGTGAAAG
AAAGGAGGTACTAGGATAAT

Downstream 100 bases:

>100_bases
CTCATCCATATATCTAACTTCGCACGATAGCGAAACAAATTTGAAAGAAAAGAGGGAGTGAGAATGAGGTCTAAGCGATT
TGAAGTATTAGCTAAAAGAC

Product: microcompartments protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MDEQVIKKVVEDVLKKVGIEQKEENKANRGEPVITNPGLTEFVGTALGDTIGLVIANVDASLHEKMGIDPKYRSIGIIGG
RTGAGPQIMAADEAVKATNTEVVAIELPRDTKGGAGHGNLIIFGAEEVSDARRAVEVALKELRRTFGDVYVNEAGHLEFQ
YTARASYALQKAFGAPLGKAFGLIVGAPAAIGVLCCDTAVKAAEVEVIGYASPAKGTSMTNEAILFISGDSGAVRQAIIA
AREVGLKLLSTLGEAPKSLSGEPYI

Sequences:

>Translated_265_residues
MDEQVIKKVVEDVLKKVGIEQKEENKANRGEPVITNPGLTEFVGTALGDTIGLVIANVDASLHEKMGIDPKYRSIGIIGG
RTGAGPQIMAADEAVKATNTEVVAIELPRDTKGGAGHGNLIIFGAEEVSDARRAVEVALKELRRTFGDVYVNEAGHLEFQ
YTARASYALQKAFGAPLGKAFGLIVGAPAAIGVLCCDTAVKAAEVEVIGYASPAKGTSMTNEAILFISGDSGAVRQAIIA
AREVGLKLLSTLGEAPKSLSGEPYI
>Mature_265_residues
MDEQVIKKVVEDVLKKVGIEQKEENKANRGEPVITNPGLTEFVGTALGDTIGLVIANVDASLHEKMGIDPKYRSIGIIGG
RTGAGPQIMAADEAVKATNTEVVAIELPRDTKGGAGHGNLIIFGAEEVSDARRAVEVALKELRRTFGDVYVNEAGHLEFQ
YTARASYALQKAFGAPLGKAFGLIVGAPAAIGVLCCDTAVKAAEVEVIGYASPAKGTSMTNEAILFISGDSGAVRQAIIA
AREVGLKLLSTLGEAPKSLSGEPYI

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4816

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutL/PduB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009193
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 27675; Mature: 27675

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEQVIKKVVEDVLKKVGIEQKEENKANRGEPVITNPGLTEFVGTALGDTIGLVIANVDA
CCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEECCCHHHHHHHHHHHHHEEEEECCCH
SLHEKMGIDPKYRSIGIIGGRTGAGPQIMAADEAVKATNTEVVAIELPRDTKGGAGHGNL
HHHHHCCCCCCCCEEEEECCCCCCCCCEEECCHHHHCCCCEEEEEECCCCCCCCCCCCCE
IIFGAEEVSDARRAVEVALKELRRTFGDVYVNEAGHLEFQYTARASYALQKAFGAPLGKA
EEECCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEHHHHHHHHHHHCCCHHHH
FGLIVGAPAAIGVLCCDTAVKAAEVEVIGYASPAKGTSMTNEAILFISGDSGAVRQAIIA
HHHHHCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHH
AREVGLKLLSTLGEAPKSLSGEPYI
HHHHHHHHHHHHCCCCHHCCCCCCC
>Mature Secondary Structure
MDEQVIKKVVEDVLKKVGIEQKEENKANRGEPVITNPGLTEFVGTALGDTIGLVIANVDA
CCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEECCCHHHHHHHHHHHHHEEEEECCCH
SLHEKMGIDPKYRSIGIIGGRTGAGPQIMAADEAVKATNTEVVAIELPRDTKGGAGHGNL
HHHHHCCCCCCCCEEEEECCCCCCCCCEEECCHHHHCCCCEEEEEECCCCCCCCCCCCCE
IIFGAEEVSDARRAVEVALKELRRTFGDVYVNEAGHLEFQYTARASYALQKAFGAPLGKA
EEECCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEHHHHHHHHHHHCCCHHHH
FGLIVGAPAAIGVLCCDTAVKAAEVEVIGYASPAKGTSMTNEAILFISGDSGAVRQAIIA
HHHHHCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHH
AREVGLKLLSTLGEAPKSLSGEPYI
HHHHHHHHHHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8071226; 9352910; 11677609 [H]