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The map label for this gene is pduA [H]

Identifier: 167040577

GI number: 167040577

Start: 1957669

End: 1958235

Strand: Reverse

Name: pduA [H]

Synonym: Teth514_1948

Alternate gene names: 167040577

Gene position: 1958235-1957669 (Counterclockwise)

Preceding gene: 167040578

Following gene: 167040576

Centisome position: 79.69

GC content: 39.51

Gene sequence:

>567_bases
ATGAGTGAAGCCATAGGATTAATAGAAACAGTAGGGCTTGTTGCAGCAATTGAAGCCGCTGATGCAGCAGTTAAAGCAGC
CAATGTAAAACTAATAGGTTACGAATTAGCTAGAGGTAGTGGTCTTACAACAGTAAAGATAAAAGGAGATGTTGGAGCTG
TGAAAGCAGCAGTAGAAGCTGGCAAAGCAGCGGCTTTAAGGGTAGGCAAAGTTTATGCAGTTCATATAATACCTCGGCCT
GATAAGCAGGTAGGATTTATTGTGGGAGAAGAAAAAAACCTTACTTTATTGATGCCAGTTATCGAGAAAGAGGAAAAAGA
GAAAAACGATTCTGAGCCAAAGATAAAAGTAACAGAAGGAGAGACAATAGAGAAAAGAGAAATAGAACAGAAATTTGAGA
AAGAGGATAAAAGTGAGGCTAAAGAAGAAACTGGAGAAGTAGAGGAAGAAGATGATAAGGAAGGAATGGCATATACGTGC
AATCTCTGCAAAGATCCTGGATGTCCACGTAAAAAAGGTGAACCACGTACACTGTGCATTCATTACAACGAGCTAAAAAT
GAGGTGA

Upstream 100 bases:

>100_bases
TACGATCCCAATTTGTATAGAAATATTGGTATAAATGCAGCCAGGTTAGCCAAAAATTTACCATTAGTTTTTGCGTAAGA
AAGTGAGGTGGAGAGGTGGT

Downstream 100 bases:

>100_bases
TATGATGGACTGCCTCAATATTGAAGAACTTACCCGGATTATAATAAAAGAAATTAGGGATTATGAAGAAAAAGAAGGAG
TTAAAAGTAGAAGGAAAATA

Product: microcompartments protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSEAIGLIETVGLVAAIEAADAAVKAANVKLIGYELARGSGLTTVKIKGDVGAVKAAVEAGKAAALRVGKVYAVHIIPRP
DKQVGFIVGEEKNLTLLMPVIEKEEKEKNDSEPKIKVTEGETIEKREIEQKFEKEDKSEAKEETGEVEEEDDKEGMAYTC
NLCKDPGCPRKKGEPRTLCIHYNELKMR

Sequences:

>Translated_188_residues
MSEAIGLIETVGLVAAIEAADAAVKAANVKLIGYELARGSGLTTVKIKGDVGAVKAAVEAGKAAALRVGKVYAVHIIPRP
DKQVGFIVGEEKNLTLLMPVIEKEEKEKNDSEPKIKVTEGETIEKREIEQKFEKEDKSEAKEETGEVEEEDDKEGMAYTC
NLCKDPGCPRKKGEPRTLCIHYNELKMR
>Mature_187_residues
SEAIGLIETVGLVAAIEAADAAVKAANVKLIGYELARGSGLTTVKIKGDVGAVKAAVEAGKAAALRVGKVYAVHIIPRPD
KQVGFIVGEEKNLTLLMPVIEKEEKEKNDSEPKIKVTEGETIEKREIEQKFEKEDKSEAKEETGEVEEEDDKEGMAYTCN
LCKDPGCPRKKGEPRTLCIHYNELKMR

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=78, Percent_Identity=60.2564102564103, Blast_Score=73, Evalue=9e-15,
Organism=Escherichia coli, GI87082105, Length=88, Percent_Identity=47.7272727272727, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 20526; Mature: 20395

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAIGLIETVGLVAAIEAADAAVKAANVKLIGYELARGSGLTTVKIKGDVGAVKAAVEA
CCCHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEEECCCCEEEEEECCCCHHHHHHHHC
GKAAALRVGKVYAVHIIPRPDKQVGFIVGEEKNLTLLMPVIEKEEKEKNDSEPKIKVTEG
CCCEEEEECEEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCHHHHCCCCCCEEEEECC
ETIEKREIEQKFEKEDKSEAKEETGEVEEEDDKEGMAYTCNLCKDPGCPRKKGEPRTLCI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEE
HYNELKMR
EECCEECC
>Mature Secondary Structure 
SEAIGLIETVGLVAAIEAADAAVKAANVKLIGYELARGSGLTTVKIKGDVGAVKAAVEA
CCHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEEECCCCEEEEEECCCCHHHHHHHHC
GKAAALRVGKVYAVHIIPRPDKQVGFIVGEEKNLTLLMPVIEKEEKEKNDSEPKIKVTEG
CCCEEEEECEEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCHHHHCCCCCCEEEEECC
ETIEKREIEQKFEKEDKSEAKEETGEVEEEDDKEGMAYTCNLCKDPGCPRKKGEPRTLCI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEE
HYNELKMR
EECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]