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The map label for this gene is hgdA [H]

Identifier: 167040530

GI number: 167040530

Start: 1914330

End: 1915580

Strand: Reverse

Name: hgdA [H]

Synonym: Teth514_1899

Alternate gene names: 167040530

Gene position: 1915580-1914330 (Counterclockwise)

Preceding gene: 167040531

Following gene: 167040529

Centisome position: 77.96

GC content: 32.93

Gene sequence:

>1251_bases
ATGGATACAATAAGGATTTATACCAATATTATAAAAGAGAATATGGATAGACCGGAAAAAGTAAATAAGCTAATAAACTT
TGGTCTTACCGCTGCTTATTATTATGTGAGCTTTTTCAAAGACAAGAGGATTCCCAAATCTCTTAATTACCTAAATAAAT
ACTCTATAAAAAGCATAAAAGATTCTTTAGCAAATCCTCAAAATTCTGCTTGGGTAAACCTCTTTGCACCCTCTGAATTT
TTGATTGCTATGGACATAAAACCCTTATTTATTGAAGCATATTCTTCTTTCATGTCAGGCTTCTTCATCGAAGATTATCT
CGTCGATACTGCCGAATCGAGAGGCATGTCAAATACTTTATGCAGTTACCATAAAACTTTTATAGGAGCCAGTGAGCTTA
ATATTCTCAAAAAACCTAAATTTATGATGACTACTTCCATGATCTGTGATGCGAATATACCTACTTTCAAGTATCTTTCA
AAAAAGCACGGGGTTCCACTGTACATTATTGATATTCCCTACAAATATTCTAAAGACGCTGTAGTGTATGTAAAAAAACA
ACTTTTAGAAGTGGCGGAAAAGCTTGAGGAAGTCTTTAACAGAAAGCTTGATACTGATAAATTGAGGGAAGTCGTAAAAA
CGGAAAATAAAACAAGAGCACTTATGAGAGAGTATTTAAATCATGCGGGAGAAAAAAGATTTTTACCTACTATGACCTTT
GAAATGTATATGCTTTTTGCATCCCATGTATTCATTGGAAGCAAGGAAGTATTGCATTTTTATGAGATGTTAGTGGAGGA
TATAAAAAGAGCTCCTGAAAGAAGTGGAAAAAGCATATTTTTTATACACCTTCTTCCTATGTTTGAGAAAAATTTTAAAG
ATTACTTTAATTTCAACGATAAATTTCACATTGCTGGTAGTGATTTAAATTATGATTTTCTTGAGGAAATTGATGAAAAC
GACCCATTCAAGGGAATTGCTGAAAAGCTTATCTTAAACTCTTTTAATGGTGAAATAAATAGAAAAGTTGCAAGAATCAG
AGAACTGATAGAAAAAATAAAACCGGACGGCATTATACAGTTTTGTCATTTGGGCTGTAAACAGTCGATGGGTGGAACGT
TTATAATTAAAAATCTTGCTTCAGAATTGGGTATTCCATTTCTTTATTTAGATGGGGATTGTGTAGACAAAAGAAATAAT
CAAGAGGGACAGAATAGGACGAGGCTCGAAGCCTTTCTTGAAATGCTCTAG

Upstream 100 bases:

>100_bases
GGGAAAGGGCAAAACAAATTATCTAGGAGATGAGAAATAAATATCAACTGGAGAAAAAACCACTTCTGTGAGGAAGGGGA
GTTTATGGGGTAGTGATAAA

Downstream 100 bases:

>100_bases
TAATCCTTCTGGAGGTGAAAAATTGATAGGGTACATTTGCAAATACACGCCTGTAGAAATAATCGAAGCTTTTGGAGAAA
AACCGGTAAGACTTGATCCA

Product: 2-hydroxyglutaryl-CoA dehydratase, D-component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MDTIRIYTNIIKENMDRPEKVNKLINFGLTAAYYYVSFFKDKRIPKSLNYLNKYSIKSIKDSLANPQNSAWVNLFAPSEF
LIAMDIKPLFIEAYSSFMSGFFIEDYLVDTAESRGMSNTLCSYHKTFIGASELNILKKPKFMMTTSMICDANIPTFKYLS
KKHGVPLYIIDIPYKYSKDAVVYVKKQLLEVAEKLEEVFNRKLDTDKLREVVKTENKTRALMREYLNHAGEKRFLPTMTF
EMYMLFASHVFIGSKEVLHFYEMLVEDIKRAPERSGKSIFFIHLLPMFEKNFKDYFNFNDKFHIAGSDLNYDFLEEIDEN
DPFKGIAEKLILNSFNGEINRKVARIRELIEKIKPDGIIQFCHLGCKQSMGGTFIIKNLASELGIPFLYLDGDCVDKRNN
QEGQNRTRLEAFLEML

Sequences:

>Translated_416_residues
MDTIRIYTNIIKENMDRPEKVNKLINFGLTAAYYYVSFFKDKRIPKSLNYLNKYSIKSIKDSLANPQNSAWVNLFAPSEF
LIAMDIKPLFIEAYSSFMSGFFIEDYLVDTAESRGMSNTLCSYHKTFIGASELNILKKPKFMMTTSMICDANIPTFKYLS
KKHGVPLYIIDIPYKYSKDAVVYVKKQLLEVAEKLEEVFNRKLDTDKLREVVKTENKTRALMREYLNHAGEKRFLPTMTF
EMYMLFASHVFIGSKEVLHFYEMLVEDIKRAPERSGKSIFFIHLLPMFEKNFKDYFNFNDKFHIAGSDLNYDFLEEIDEN
DPFKGIAEKLILNSFNGEINRKVARIRELIEKIKPDGIIQFCHLGCKQSMGGTFIIKNLASELGIPFLYLDGDCVDKRNN
QEGQNRTRLEAFLEML
>Mature_416_residues
MDTIRIYTNIIKENMDRPEKVNKLINFGLTAAYYYVSFFKDKRIPKSLNYLNKYSIKSIKDSLANPQNSAWVNLFAPSEF
LIAMDIKPLFIEAYSSFMSGFFIEDYLVDTAESRGMSNTLCSYHKTFIGASELNILKKPKFMMTTSMICDANIPTFKYLS
KKHGVPLYIIDIPYKYSKDAVVYVKKQLLEVAEKLEEVFNRKLDTDKLREVVKTENKTRALMREYLNHAGEKRFLPTMTF
EMYMLFASHVFIGSKEVLHFYEMLVEDIKRAPERSGKSIFFIHLLPMFEKNFKDYFNFNDKFHIAGSDLNYDFLEEIDEN
DPFKGIAEKLILNSFNGEINRKVARIRELIEKIKPDGIIQFCHLGCKQSMGGTFIIKNLASELGIPFLYLDGDCVDKRNN
QEGQNRTRLEAFLEML

Specific function: Catalyzes the reversible dehydration of 2- hydroxyglutaryl-CoA to glutaconyl-CoA. This is a key step in the fermentation of glutamate. It is activated by hgdC [H]

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 48485; Mature: 48485

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTIRIYTNIIKENMDRPEKVNKLINFGLTAAYYYVSFFKDKRIPKSLNYLNKYSIKSIK
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DSLANPQNSAWVNLFAPSEFLIAMDIKPLFIEAYSSFMSGFFIEDYLVDTAESRGMSNTL
HHHCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
CSYHKTFIGASELNILKKPKFMMTTSMICDANIPTFKYLSKKHGVPLYIIDIPYKYSKDA
HHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCH
VVYVKKQLLEVAEKLEEVFNRKLDTDKLREVVKTENKTRALMREYLNHAGEKRFLPTMTF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHH
EMYMLFASHVFIGSKEVLHFYEMLVEDIKRAPERSGKSIFFIHLLPMFEKNFKDYFNFND
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHCCCEEEEEEEHHHHHHHHHHHCCCCC
KFHIAGSDLNYDFLEEIDENDPFKGIAEKLILNSFNGEINRKVARIRELIEKIKPDGIIQ
EEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
FCHLGCKQSMGGTFIIKNLASELGIPFLYLDGDCVDKRNNQEGQNRTRLEAFLEML
HHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MDTIRIYTNIIKENMDRPEKVNKLINFGLTAAYYYVSFFKDKRIPKSLNYLNKYSIKSIK
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DSLANPQNSAWVNLFAPSEFLIAMDIKPLFIEAYSSFMSGFFIEDYLVDTAESRGMSNTL
HHHCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
CSYHKTFIGASELNILKKPKFMMTTSMICDANIPTFKYLSKKHGVPLYIIDIPYKYSKDA
HHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCH
VVYVKKQLLEVAEKLEEVFNRKLDTDKLREVVKTENKTRALMREYLNHAGEKRFLPTMTF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHH
EMYMLFASHVFIGSKEVLHFYEMLVEDIKRAPERSGKSIFFIHLLPMFEKNFKDYFNFND
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHCCCEEEEEEEHHHHHHHHHHHCCCCC
KFHIAGSDLNYDFLEEIDENDPFKGIAEKLILNSFNGEINRKVARIRELIEKIKPDGIIQ
EEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
FCHLGCKQSMGGTFIIKNLASELGIPFLYLDGDCVDKRNNQEGQNRTRLEAFLEML
HHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2659350; 3691501; 8365476; 11106419 [H]