Click here to switch to the map view.

The map label for this gene is ybfF [C]

Identifier: 167040187

GI number: 167040187

Start: 1572804

End: 1573490

Strand: Direct

Name: ybfF [C]

Synonym: Teth514_1549

Alternate gene names: 167040187

Gene position: 1572804-1573490 (Clockwise)

Preceding gene: 167040186

Following gene: 167040188

Centisome position: 64.01

GC content: 31.3

Gene sequence:

>687_bases
ATGAAGAAAAAAGTTAGTGTGCTGATACCTGCTTACAATGAAGAAGAAAGAATAATTGATACCATAAAAGGATTAAAAGA
TGTTGAAGAAGTTGATGAAGTCATCGTAATAAATGATGGCTCAACTGACAATACTGCTGAAAAGGCAAGAAAAGCAGGGG
CTAAAATAGTCAATATGAAGAGAAATGTTGGCAAAGGAACAGCTTTAAAAGAAGGTTTAAAATATGTAAAAAATGATGTT
ATAGTTTTTTTAGACGCAGATGTAGGCCTTTCGTCACGAGAAGTCAAAAAACTTATATTACCTGTTCTTGATGGAGAAGC
AGATGTTACAATTGCTAAATTTCCAAAGACAAATGTAAAAGCTGGATTTGGCTTTGTTAAAACTTTAGCCAGAAAAGGAG
TAAAATACTTTACAGGATATGAAATTGAATCTGTCTTATCAGGTCAAAGGGCTTTTAAAAAAGAAGTTTTAGAGAGTTTA
AAAGCTTTTTATAAAGGTTTTGGAATAGAAGTTGGTATGACAATAGATATATTAAAAAAAGGGTATAAAATAAAAGAAGT
AGAAGTAAATATGACTCACTCTGTTACAGGTAGGGACTTGAAAGGCTTCCTGCACAGAGGGAAGCAGTTTTGGGATATAC
TAAAAGTATTAGTGTATAAGTTATTTTCAAAGAATATTAAAGAATAG

Upstream 100 bases:

>100_bases
ATTAAGCAAAGTGCAATGAGCTTAATGCCAGATTCTTTTATGAAGGCTGACAATTCTACTCATAATTCCGCTGCTAATTC
TAAAAAGTGAGGGTAGATAG

Downstream 100 bases:

>100_bases
CAGGTGAGATAGTGTTTTGGGCTAAAATATTAATTCCTTTAATAATGACAGTTATAACAAAGAAGCTTTTTTATAGCATT
ATTAACAAGCCTTTGTGTTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKKKVSVLIPAYNEEERIIDTIKGLKDVEEVDEVIVINDGSTDNTAEKARKAGAKIVNMKRNVGKGTALKEGLKYVKNDV
IVFLDADVGLSSREVKKLILPVLDGEADVTIAKFPKTNVKAGFGFVKTLARKGVKYFTGYEIESVLSGQRAFKKEVLESL
KAFYKGFGIEVGMTIDILKKGYKIKEVEVNMTHSVTGRDLKGFLHRGKQFWDILKVLVYKLFSKNIKE

Sequences:

>Translated_228_residues
MKKKVSVLIPAYNEEERIIDTIKGLKDVEEVDEVIVINDGSTDNTAEKARKAGAKIVNMKRNVGKGTALKEGLKYVKNDV
IVFLDADVGLSSREVKKLILPVLDGEADVTIAKFPKTNVKAGFGFVKTLARKGVKYFTGYEIESVLSGQRAFKKEVLESL
KAFYKGFGIEVGMTIDILKKGYKIKEVEVNMTHSVTGRDLKGFLHRGKQFWDILKVLVYKLFSKNIKE
>Mature_228_residues
MKKKVSVLIPAYNEEERIIDTIKGLKDVEEVDEVIVINDGSTDNTAEKARKAGAKIVNMKRNVGKGTALKEGLKYVKNDV
IVFLDADVGLSSREVKKLILPVLDGEADVTIAKFPKTNVKAGFGFVKTLARKGVKYFTGYEIESVLSGQRAFKKEVLESL
KAFYKGFGIEVGMTIDILKKGYKIKEVEVNMTHSVTGRDLKGFLHRGKQFWDILKVLVYKLFSKNIKE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=214, Percent_Identity=27.1028037383178, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1788588, Length=107, Percent_Identity=34.5794392523364, Blast_Score=69, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24585265, Length=213, Percent_Identity=30.0469483568075, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 25507; Mature: 25507

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKVSVLIPAYNEEERIIDTIKGLKDVEEVDEVIVINDGSTDNTAEKARKAGAKIVNMK
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCHHHHHHH
RNVGKGTALKEGLKYVKNDVIVFLDADVGLSSREVKKLILPVLDGEADVTIAKFPKTNVK
HCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCH
AGFGFVKTLARKGVKYFTGYEIESVLSGQRAFKKEVLESLKAFYKGFGIEVGMTIDILKK
HHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHC
GYKIKEVEVNMTHSVTGRDLKGFLHRGKQFWDILKVLVYKLFSKNIKE
CCEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKVSVLIPAYNEEERIIDTIKGLKDVEEVDEVIVINDGSTDNTAEKARKAGAKIVNMK
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCHHHHHHH
RNVGKGTALKEGLKYVKNDVIVFLDADVGLSSREVKKLILPVLDGEADVTIAKFPKTNVK
HCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCH
AGFGFVKTLARKGVKYFTGYEIESVLSGQRAFKKEVLESLKAFYKGFGIEVGMTIDILKK
HHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHC
GYKIKEVEVNMTHSVTGRDLKGFLHRGKQFWDILKVLVYKLFSKNIKE
CCEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]