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The map label for this gene is nusB

Identifier: 167040172

GI number: 167040172

Start: 1557561

End: 1557983

Strand: Direct

Name: nusB

Synonym: Teth514_1534

Alternate gene names: 167040172

Gene position: 1557561-1557983 (Clockwise)

Preceding gene: 167040171

Following gene: 167040173

Centisome position: 63.39

GC content: 34.28

Gene sequence:

>423_bases
ATGAACAGAACAGAAGCTAGGGAATGGGTTGTAAAAATGCTTTATCAATACGACGTTTCAAGGTTACCTATAAGCAAAAT
ACTTGAAAATTTTTATAAAGAAAAGGACCCAGGCGAGCAAAAAGAGTATATAGAAAATACCGTAATAGGGGCTATTGAAC
ATTTAGAAGAAATTGATAAGGAAATAGAAAGATACTCTCAAAATTGGGCTCTTAACCGCATGCCAAAAATAGATTTGGCT
ATTTTAAGGTGCAGCATTTATGAGATGCAATACGGGAATATTCCTGTAAATATTTCTATAAACGAAGCAGTAGAAATAGC
CAAAAAATACAGCACAGAAGATTCTCCTGCTTTTATAAACGGTTTGTTGGGAGCATTTGTAAGGGATGAAGGATTGGAGG
AAGGTGAATCAAATGATAATTGA

Upstream 100 bases:

>100_bases
AAAACATCTACTTAAACTAACCCTCTGTTAGACAGAGGGTTAGTTTAAGTAGAGTTATGGTACAATATATGTAAGAGGTA
AAATTCAAGGAGTTGGGACA

Downstream 100 bases:

>100_bases
TGGTAAGGAGATTTCTAAAAAGATAAGAGAAGAGGTAAAAAGAGAGATAAAGAAGTTTGGCTACAAGCCCAAATTAGCGA
TATTGATGGCGGGAGATGAT

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNRTEAREWVVKMLYQYDVSRLPISKILENFYKEKDPGEQKEYIENTVIGAIEHLEEIDKEIERYSQNWALNRMPKIDLA
ILRCSIYEMQYGNIPVNISINEAVEIAKKYSTEDSPAFINGLLGAFVRDEGLEEGESNDN

Sequences:

>Translated_140_residues
MNRTEAREWVVKMLYQYDVSRLPISKILENFYKEKDPGEQKEYIENTVIGAIEHLEEIDKEIERYSQNWALNRMPKIDLA
ILRCSIYEMQYGNIPVNISINEAVEIAKKYSTEDSPAFINGLLGAFVRDEGLEEGESNDN
>Mature_140_residues
MNRTEAREWVVKMLYQYDVSRLPISKILENFYKEKDPGEQKEYIENTVIGAIEHLEEIDKEIERYSQNWALNRMPKIDLA
ILRCSIYEMQYGNIPVNISINEAVEIAKKYSTEDSPAFINGLLGAFVRDEGLEEGESNDN

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_THEP3 (B0K9D9)

Other databases:

- EMBL:   CP000924
- RefSeq:   YP_001665088.1
- ProteinModelPortal:   B0K9D9
- SMR:   B0K9D9
- GeneID:   5875359
- GenomeReviews:   CP000924_GR
- KEGG:   tpd:Teth39_1097
- HOGENOM:   HBG734409
- OMA:   DINQSAM
- ProtClustDB:   PRK00202
- BioCyc:   TPSE340099:TETH39_1097-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 16282; Mature: 16282

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTEAREWVVKMLYQYDVSRLPISKILENFYKEKDPGEQKEYIENTVIGAIEHLEEIDK
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EIERYSQNWALNRMPKIDLAILRCSIYEMQYGNIPVNISINEAVEIAKKYSTEDSPAFIN
HHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHHHCCCCCHHHHH
GLLGAFVRDEGLEEGESNDN
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNRTEAREWVVKMLYQYDVSRLPISKILENFYKEKDPGEQKEYIENTVIGAIEHLEEIDK
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EIERYSQNWALNRMPKIDLAILRCSIYEMQYGNIPVNISINEAVEIAKKYSTEDSPAFIN
HHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHHHCCCCCHHHHH
GLLGAFVRDEGLEEGESNDN
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA