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The map label for this gene is yrrO [H]

Identifier: 167040137

GI number: 167040137

Start: 1530464

End: 1531681

Strand: Direct

Name: yrrO [H]

Synonym: Teth514_1499

Alternate gene names: 167040137

Gene position: 1530464-1531681 (Clockwise)

Preceding gene: 167040136

Following gene: 167040138

Centisome position: 62.28

GC content: 35.63

Gene sequence:

>1218_bases
ATGTTAGAGCTTTTGGCACCAGTTGGAGATTTGGAAAGATTAAAAATAGCTATAAATTACGGAGCAGATGCGGTATATTT
TGGAGGGAAACACTATAGTTTAAGGGCTTCTGTTGGTTTGACTCTTGAAGAGATAAAAGAAGCAATAAAATATGTGAGGA
AAAGTGGAAAAAAAGCATATATTACTATAAATATCTTTCCCCACAATGAGGATTTGGAAGGATTGCCTGAATACATTAAA
TCAGTCGTTGACCTTGGCATAGATGCTATTATTCTTTCTGACCCAGGGATTTTTTCTATTGTAAAAGAAGTAGCTCCTGA
AGTAGATGTTCATATAAGTACGCAAGCAAATAATGTGAATTATAAAAGTGCTCTGTTTTGGCATAATTTAGGGGCAAAAA
GAATAATTTTGGCAAGGGAACTATCTTTAAAAGAGATAAAAGAAATAAGAGAGAAGACACCAAAAACTTTAGAATTAGAG
GCATTTGTCCACGGGGCTATGTGCATTTCTTACTCAGGAAGGTGCCTTTTAAGCAATTACCTTACAGGAAGAGATTCTAA
TAAAGGTGAATGTGCACAACCTTGCCGGTGGAAATATTATCTTGTAGAAGAAAAAAGGCCAGGAGAGTATATGCCCATAT
TCGAAGATGAAAGGGGCACATATATTATGAATTCTAAAGACCTATGCATGATAGAGTACATTCCAGAACTTGTTGAGGCT
GGAGTTACAAGCTTTAAAATTGAGGGAAGAAACAAAAGTGCCTACTATGTTGCTGTAGTGACAAGGGCTTACAGAAAGGC
GATTGACGATTACCTTGAAAAAGGAAAAGATTATGTTTTTGACAAAAAACTTCTTGAAGAGGTTTCTAAAGCAAGTCACA
GAGGATTTACCACAGGGTTTTATTTTGGCAAGCCAGGTCCTGACGCTCAAAATTATGAGTCTTCTAAGTATATACGTACT
CATGATTTTGTAGGAATTGTAAAAGAATATGACCCCAATACAGAAATTGCTGTTGTAGAGCAAAGAAACAGGATGTTTGT
GGGAGATAAAATTGAGATTATGGGTCCTAAAGTAGAGTTTGAGCAGCAAATTGAAAAAATGTGGGATGAAGAAGGAAATG
AGATTGAAGTAGCTCCCCATCCTCAAATGATAGTGAAAATTCCTGTAAAGTATCCTGTAGAAGAATTTTTTATACTGCGT
CGAGAAATTAAAAATTAG

Upstream 100 bases:

>100_bases
GAATTTATAGAAATATTATATCAAGATAAAACTTTGTACACGGTAATTTTGCCTTTAGGAGACGGATTGGCTTTAAGTTT
TAAGGAGGAATAGAATAATC

Downstream 100 bases:

>100_bases
GTTAAAACTTGCTCCTTTTGGGAATACTTTTTCCTGAAAGGAGCAAAGTTTTATGGAAAATAGAAATTATAGGATTGTTT
TTTTGAGGGTAGTTTTGTCA

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MLELLAPVGDLERLKIAINYGADAVYFGGKHYSLRASVGLTLEEIKEAIKYVRKSGKKAYITINIFPHNEDLEGLPEYIK
SVVDLGIDAIILSDPGIFSIVKEVAPEVDVHISTQANNVNYKSALFWHNLGAKRIILARELSLKEIKEIREKTPKTLELE
AFVHGAMCISYSGRCLLSNYLTGRDSNKGECAQPCRWKYYLVEEKRPGEYMPIFEDERGTYIMNSKDLCMIEYIPELVEA
GVTSFKIEGRNKSAYYVAVVTRAYRKAIDDYLEKGKDYVFDKKLLEEVSKASHRGFTTGFYFGKPGPDAQNYESSKYIRT
HDFVGIVKEYDPNTEIAVVEQRNRMFVGDKIEIMGPKVEFEQQIEKMWDEEGNEIEVAPHPQMIVKIPVKYPVEEFFILR
REIKN

Sequences:

>Translated_405_residues
MLELLAPVGDLERLKIAINYGADAVYFGGKHYSLRASVGLTLEEIKEAIKYVRKSGKKAYITINIFPHNEDLEGLPEYIK
SVVDLGIDAIILSDPGIFSIVKEVAPEVDVHISTQANNVNYKSALFWHNLGAKRIILARELSLKEIKEIREKTPKTLELE
AFVHGAMCISYSGRCLLSNYLTGRDSNKGECAQPCRWKYYLVEEKRPGEYMPIFEDERGTYIMNSKDLCMIEYIPELVEA
GVTSFKIEGRNKSAYYVAVVTRAYRKAIDDYLEKGKDYVFDKKLLEEVSKASHRGFTTGFYFGKPGPDAQNYESSKYIRT
HDFVGIVKEYDPNTEIAVVEQRNRMFVGDKIEIMGPKVEFEQQIEKMWDEEGNEIEVAPHPQMIVKIPVKYPVEEFFILR
REIKN
>Mature_405_residues
MLELLAPVGDLERLKIAINYGADAVYFGGKHYSLRASVGLTLEEIKEAIKYVRKSGKKAYITINIFPHNEDLEGLPEYIK
SVVDLGIDAIILSDPGIFSIVKEVAPEVDVHISTQANNVNYKSALFWHNLGAKRIILARELSLKEIKEIREKTPKTLELE
AFVHGAMCISYSGRCLLSNYLTGRDSNKGECAQPCRWKYYLVEEKRPGEYMPIFEDERGTYIMNSKDLCMIEYIPELVEA
GVTSFKIEGRNKSAYYVAVVTRAYRKAIDDYLEKGKDYVFDKKLLEEVSKASHRGFTTGFYFGKPGPDAQNYESSKYIRT
HDFVGIVKEYDPNTEIAVVEQRNRMFVGDKIEIMGPKVEFEQQIEKMWDEEGNEIEVAPHPQMIVKIPVKYPVEEFFILR
REIKN

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=438, Percent_Identity=41.0958904109589, Blast_Score=300, Evalue=9e-83,
Organism=Escherichia coli, GI87081910, Length=361, Percent_Identity=33.2409972299169, Blast_Score=191, Evalue=8e-50,
Organism=Escherichia coli, GI1789548, Length=334, Percent_Identity=32.3353293413174, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 46421; Mature: 46421

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELLAPVGDLERLKIAINYGADAVYFGGKHYSLRASVGLTLEEIKEAIKYVRKSGKKAY
CCCCCCCCCCCEEEEEEEEECCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEE
ITINIFPHNEDLEGLPEYIKSVVDLGIDAIILSDPGIFSIVKEVAPEVDVHISTQANNVN
EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCEEEEEECCCCCC
YKSALFWHNLGAKRIILARELSLKEIKEIREKTPKTLELEAFVHGAMCISYSGRCLLSNY
CHHEEEEECCCCCEEEEEECCCHHHHHHHHHHCCCEEEEHHHHEEEEEEECCCCEEEEHH
LTGRDSNKGECAQPCRWKYYLVEEKRPGEYMPIFEDERGTYIMNSKDLCMIEYIPELVEA
HCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCEEEECCCCEEHHHHHHHHHHC
GVTSFKIEGRNKSAYYVAVVTRAYRKAIDDYLEKGKDYVFDKKLLEEVSKASHRGFTTGF
CCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEE
YFGKPGPDAQNYESSKYIRTHDFVGIVKEYDPNTEIAVVEQRNRMFVGDKIEIMGPKVEF
ECCCCCCCCCCCCCCCEEEECHHEEEEEECCCCCCEEEEECCCEEEECCEEEEECCCCHH
EQQIEKMWDEEGNEIEVAPHPQMIVKIPVKYPVEEFFILRREIKN
HHHHHHHHCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLELLAPVGDLERLKIAINYGADAVYFGGKHYSLRASVGLTLEEIKEAIKYVRKSGKKAY
CCCCCCCCCCCEEEEEEEEECCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEE
ITINIFPHNEDLEGLPEYIKSVVDLGIDAIILSDPGIFSIVKEVAPEVDVHISTQANNVN
EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCEEEEEECCCCCC
YKSALFWHNLGAKRIILARELSLKEIKEIREKTPKTLELEAFVHGAMCISYSGRCLLSNY
CHHEEEEECCCCCEEEEEECCCHHHHHHHHHHCCCEEEEHHHHEEEEEEECCCCEEEEHH
LTGRDSNKGECAQPCRWKYYLVEEKRPGEYMPIFEDERGTYIMNSKDLCMIEYIPELVEA
HCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCEEEECCCCEEHHHHHHHHHHC
GVTSFKIEGRNKSAYYVAVVTRAYRKAIDDYLEKGKDYVFDKKLLEEVSKASHRGFTTGF
CCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEE
YFGKPGPDAQNYESSKYIRTHDFVGIVKEYDPNTEIAVVEQRNRMFVGDKIEIMGPKVEF
ECCCCCCCCCCCCCCCEEEECHHEEEEEECCCCCCEEEEECCCEEEECCEEEEECCCCHH
EQQIEKMWDEEGNEIEVAPHPQMIVKIPVKYPVEEFFILRREIKN
HHHHHHHHCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]