| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040119
Identifier: 167040119
GI number: 167040119
Start: 1513473
End: 1515677
Strand: Direct
Name: 167040119
Synonym: Teth514_1481
Alternate gene names: NA
Gene position: 1513473-1515677 (Clockwise)
Preceding gene: 167040118
Following gene: 167040120
Centisome position: 61.59
GC content: 37.23
Gene sequence:
>2205_bases ATGAAGCTTGAAAAGGATAAAAAAATAGATATTGAAGAGATTTTAAAAGATTTAGATAAATATGTGCCGAGGAGAAGAGG ATGGCACTGGAGAGAGGATGTAGGCAAACACAAAATTGGCGATTTTGAGTATTATCAGGTTTCAAAACCACTTAAAAACA GTATTCCACTTCCTGCTGCAAAACACTTTGGAAACATTGATCCTCAGCCAGATTGTGTGATAACTACAGAAATAGCTTCA GGAAGGTTTGAAGATGATATAAGGCGCATGAGGATGGCAGCATGGCATGGAGCAGACCACATAATGGTAATCAGAACTTT AGGACAAAGTCATTTTGATGGACTTATTGAAGGAACACCTGAGGGTGTAGGAGGAGTTCCTATTTCGAGAAAACAAATAA GAGCGACGAGAAAAGCATTGGATTTAATTGAAGATGAAGTCGGTAGGCCTATAAACTTTCACTCTTATGTAAGTGGAATA GCTGGACCTGAAGTAGCTGTTATGTTCGCTGAAGAAGGGGTAAATGGTGCCCATCAAGACCCTCAGTACAATGTCCTTTA TAGAAATATAAACATGGTAAGGTCTTTTGTAGATGCAGCAGTTGCTAAGAAAATAATGGCAGATGCTAATATACTTCAAA TTGATGGTGCTCATAACGCCAATGCAACAGCAAAATATGGATGGAAAGTTATGCCTGAACTTTTAGTACAGCATGCCATA AATACACTTTATTCGAGAAAAGTAGGAATGAAACCAGAAAACATAGCCTTATCTACAGTGCCACCAAATGCTCCACCAAC TCCTTCTATACGTTTGGATTTGCCTTATGCAGTGGCTTTAAGACAACTTTTTAAAGATTATAAAATGAGGGCACAGATGA ACACAAAATATATTGAGCACGATACAAGAGAAGCAACTGTGACACATGTGCTTAACCTTTTAATATCTCGATTGACATCT GCAGACATACAAAGTACTATTACTCCTGATGAGGGAAGAAATGTACCATGGCATTACAACAATATAAACGCGATAAACAC TGCTAAACAAGCCCTTATAGGCATGGATGGCCTTAAAGAGATGGTAAAACTCAATTTTGATGGAGAGTTAGGCAAAAAAG TAAGAGAATTAAAGATGAGAGCCATTCTCTTTATGGAAGAAATTTTAGAAGTTGGAGGATACTTTAAGGCAGTAGAAGAA GGTTTCTTTGTGGATTCAGGCTATTATCCAGAGAGAAATGGAGATGGCATAGTAAGAACTATAAATGGTGGTATTGGCGC CGGTACTGTTTACAAAAGAGATAAAGACTATATGGCGCCGGTATGCTCTCACTTTGGATATAACAATTTGCCAGAAGGGC TTAATAAACCTTGCGATTTAATAAATGGATGTACTCTTTGCAAGCATGAGAAAATTCAATATATAGACGAATTAGATGAA AGTGACAATGTAGAAAATAGATTGAAAGAAACTGTTGAGTATAGAAAAGGAGATAAAATAAAACCAGAAGTGGAGTGGGC AGGAGACGGCATAATAAGCATGAACCTATTTTTGCCTGTAGATGAAAGGACTGCTGAATACGCGGCTATTAAATACGCAG AAAAGCTGGGGCTTAATGATGTAGTCGTTTTAGGTAAACTTCCAATGCATCCTGCAGAGGGAACGTACGTGGAAGTAAGA GGACGTGTTCAATTTTCTATTGACAAAAATGAATTAGAAATACCGCCGCAAGAGGAAATACTTTCAGATGAGGAAATAGA AGGAGATATCAAGAGAAAGCCTATGAAGGTGGTTGCTGCAACTGTAGGAAATGATGAACATTCTGTGGGCTTAAGAGAGA TTTTGGATATAAAACACGGCGGAATTGAAAAATACGGCATAAAATTTACTTACCTTGGTACTTCTTGCCCTGCAGAAAAG TTAGTTGATGCAGCTATAGAGGAAAATGCTGATGCTATTTTAGTTAGCACTATAATAACCCATGATGATGTCCATATAAA GAATATGAAAAAAATTCACGACTTTTGTGTAGAAAAGGGAATAAGAGATAAAGTAATTTTAGTAGGTGGAGGTACGCAAA TTACAATCGACCTTGCTAAAAGTGTTGGCTTTGATGCAGGATTTGGAAGGGGTACAAAAGGAAATCAAGTGGCAAGTTTT TTAGTTAAAAAAAGAAGGGAAAAGGAAAATGAAGAAAACAATTGA
Upstream 100 bases:
>100_bases GCAGAAAGACTCAAAAAAGATTACCTTGCTGCTGGAAAAGCCATAGCTAACGGAGAGTACTTGGAGGTGCTTGATGATAT AGCAAGGGAGGCTAGGAAAA
Downstream 100 bases:
>100_bases CATATTTGTAGCTGAGGTTGGAAGTACTACGACAACTGTAAATGCCTTTATTCTCGGAAACAACCCTGTTTTTATAGGTC AGGGGGTGGCTCCTACCACA
Product: cobalamin B12-binding domain-containing protein
Products: NA
Alternate protein names: D-Lysine; D-Lysine 5 6-Aminomutase Alpha Subunit; D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Alpha Subunit; L-Beta-Lysine 5 6-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Alpha Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Beta-Lysine 56-Aminomutase Alpha Subunit; D-Lysine 5 6-Aminomutase Subunit Beta; D-Lysine 5 6-Aminomutase Beta Subunit; Cobalamin Vitamin; Beta-Lysine 5 6-Aminomutase Beta Subunit; Beta-Lysine 56-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Alpha Subunit; Lysine 5 6-Aminomutase Beta Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit
Number of amino acids: Translated: 734; Mature: 734
Protein sequence:
>734_residues MKLEKDKKIDIEEILKDLDKYVPRRRGWHWREDVGKHKIGDFEYYQVSKPLKNSIPLPAAKHFGNIDPQPDCVITTEIAS GRFEDDIRRMRMAAWHGADHIMVIRTLGQSHFDGLIEGTPEGVGGVPISRKQIRATRKALDLIEDEVGRPINFHSYVSGI AGPEVAVMFAEEGVNGAHQDPQYNVLYRNINMVRSFVDAAVAKKIMADANILQIDGAHNANATAKYGWKVMPELLVQHAI NTLYSRKVGMKPENIALSTVPPNAPPTPSIRLDLPYAVALRQLFKDYKMRAQMNTKYIEHDTREATVTHVLNLLISRLTS ADIQSTITPDEGRNVPWHYNNINAINTAKQALIGMDGLKEMVKLNFDGELGKKVRELKMRAILFMEEILEVGGYFKAVEE GFFVDSGYYPERNGDGIVRTINGGIGAGTVYKRDKDYMAPVCSHFGYNNLPEGLNKPCDLINGCTLCKHEKIQYIDELDE SDNVENRLKETVEYRKGDKIKPEVEWAGDGIISMNLFLPVDERTAEYAAIKYAEKLGLNDVVVLGKLPMHPAEGTYVEVR GRVQFSIDKNELEIPPQEEILSDEEIEGDIKRKPMKVVAATVGNDEHSVGLREILDIKHGGIEKYGIKFTYLGTSCPAEK LVDAAIEENADAILVSTIITHDDVHIKNMKKIHDFCVEKGIRDKVILVGGGTQITIDLAKSVGFDAGFGRGTKGNQVASF LVKKRREKENEENN
Sequences:
>Translated_734_residues MKLEKDKKIDIEEILKDLDKYVPRRRGWHWREDVGKHKIGDFEYYQVSKPLKNSIPLPAAKHFGNIDPQPDCVITTEIAS GRFEDDIRRMRMAAWHGADHIMVIRTLGQSHFDGLIEGTPEGVGGVPISRKQIRATRKALDLIEDEVGRPINFHSYVSGI AGPEVAVMFAEEGVNGAHQDPQYNVLYRNINMVRSFVDAAVAKKIMADANILQIDGAHNANATAKYGWKVMPELLVQHAI NTLYSRKVGMKPENIALSTVPPNAPPTPSIRLDLPYAVALRQLFKDYKMRAQMNTKYIEHDTREATVTHVLNLLISRLTS ADIQSTITPDEGRNVPWHYNNINAINTAKQALIGMDGLKEMVKLNFDGELGKKVRELKMRAILFMEEILEVGGYFKAVEE GFFVDSGYYPERNGDGIVRTINGGIGAGTVYKRDKDYMAPVCSHFGYNNLPEGLNKPCDLINGCTLCKHEKIQYIDELDE SDNVENRLKETVEYRKGDKIKPEVEWAGDGIISMNLFLPVDERTAEYAAIKYAEKLGLNDVVVLGKLPMHPAEGTYVEVR GRVQFSIDKNELEIPPQEEILSDEEIEGDIKRKPMKVVAATVGNDEHSVGLREILDIKHGGIEKYGIKFTYLGTSCPAEK LVDAAIEENADAILVSTIITHDDVHIKNMKKIHDFCVEKGIRDKVILVGGGTQITIDLAKSVGFDAGFGRGTKGNQVASF LVKKRREKENEENN >Mature_734_residues MKLEKDKKIDIEEILKDLDKYVPRRRGWHWREDVGKHKIGDFEYYQVSKPLKNSIPLPAAKHFGNIDPQPDCVITTEIAS GRFEDDIRRMRMAAWHGADHIMVIRTLGQSHFDGLIEGTPEGVGGVPISRKQIRATRKALDLIEDEVGRPINFHSYVSGI AGPEVAVMFAEEGVNGAHQDPQYNVLYRNINMVRSFVDAAVAKKIMADANILQIDGAHNANATAKYGWKVMPELLVQHAI NTLYSRKVGMKPENIALSTVPPNAPPTPSIRLDLPYAVALRQLFKDYKMRAQMNTKYIEHDTREATVTHVLNLLISRLTS ADIQSTITPDEGRNVPWHYNNINAINTAKQALIGMDGLKEMVKLNFDGELGKKVRELKMRAILFMEEILEVGGYFKAVEE GFFVDSGYYPERNGDGIVRTINGGIGAGTVYKRDKDYMAPVCSHFGYNNLPEGLNKPCDLINGCTLCKHEKIQYIDELDE SDNVENRLKETVEYRKGDKIKPEVEWAGDGIISMNLFLPVDERTAEYAAIKYAEKLGLNDVVVLGKLPMHPAEGTYVEVR GRVQFSIDKNELEIPPQEEILSDEEIEGDIKRKPMKVVAATVGNDEHSVGLREILDIKHGGIEKYGIKFTYLGTSCPAEK LVDAAIEENADAILVSTIITHDDVHIKNMKKIHDFCVEKGIRDKVILVGGGTQITIDLAKSVGFDAGFGRGTKGNQVASF LVKKRREKENEENN
Specific function: Unknown
COG id: COG5012
COG function: function code R; Predicted cobalamin binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82204; Mature: 82204
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLEKDKKIDIEEILKDLDKYVPRRRGWHWREDVGKHKIGDFEYYQVSKPLKNSIPLPAA CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEECCCCHHCCCCCCHH KHFGNIDPQPDCVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHFDGLIEGTP HHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHCCHHHCCCCCCCC EGVGGVPISRKQIRATRKALDLIEDEVGRPINFHSYVSGIAGPEVAVMFAEEGVNGAHQD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCC PQYNVLYRNINMVRSFVDAAVAKKIMADANILQIDGAHNANATAKYGWKVMPELLVQHAI CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCHHHHHHHHHHHHH NTLYSRKVGMKPENIALSTVPPNAPPTPSIRLDLPYAVALRQLFKDYKMRAQMNTKYIEH HHHHHHCCCCCCCCEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHC DTREATVTHVLNLLISRLTSADIQSTITPDEGRNVPWHYNNINAINTAKQALIGMDGLKE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH MVKLNFDGELGKKVRELKMRAILFMEEILEVGGYFKAVEEGFFVDSGYYPERNGDGIVRT HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEE INGGIGAGTVYKRDKDYMAPVCSHFGYNNLPEGLNKPCDLINGCTLCKHEKIQYIDELDE ECCCCCCCCEEECCCHHHHHHHHHCCCCCCCHHCCCCHHHHCCCCHHHHHHHHHHHHCCC SDNVENRLKETVEYRKGDKIKPEVEWAGDGIISMNLFLPVDERTAEYAAIKYAEKLGLND CCCHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCC VVVLGKLPMHPAEGTYVEVRGRVQFSIDKNELEIPPQEEILSDEEIEGDIKRKPMKVVAA EEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCHHHCCEEEEEE TVGNDEHSVGLREILDIKHGGIEKYGIKFTYLGTSCPAEKLVDAAIEENADAILVSTIIT ECCCCCCCHHHHHHHHHCCCCCEEECEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECC HDDVHIKNMKKIHDFCVEKGIRDKVILVGGGTQITIDLAKSVGFDAGFGRGTKGNQVASF CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHCCCCCCCCCCCCCHHHHHH LVKKRREKENEENN HHHHHHHHCCCCCC >Mature Secondary Structure MKLEKDKKIDIEEILKDLDKYVPRRRGWHWREDVGKHKIGDFEYYQVSKPLKNSIPLPAA CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEECCCCHHCCCCCCHH KHFGNIDPQPDCVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHFDGLIEGTP HHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHCCHHHCCCCCCCC EGVGGVPISRKQIRATRKALDLIEDEVGRPINFHSYVSGIAGPEVAVMFAEEGVNGAHQD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCC PQYNVLYRNINMVRSFVDAAVAKKIMADANILQIDGAHNANATAKYGWKVMPELLVQHAI CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCHHHHHHHHHHHHH NTLYSRKVGMKPENIALSTVPPNAPPTPSIRLDLPYAVALRQLFKDYKMRAQMNTKYIEH HHHHHHCCCCCCCCEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHC DTREATVTHVLNLLISRLTSADIQSTITPDEGRNVPWHYNNINAINTAKQALIGMDGLKE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH MVKLNFDGELGKKVRELKMRAILFMEEILEVGGYFKAVEEGFFVDSGYYPERNGDGIVRT HHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEE INGGIGAGTVYKRDKDYMAPVCSHFGYNNLPEGLNKPCDLINGCTLCKHEKIQYIDELDE ECCCCCCCCEEECCCHHHHHHHHHCCCCCCCHHCCCCHHHHCCCCHHHHHHHHHHHHCCC SDNVENRLKETVEYRKGDKIKPEVEWAGDGIISMNLFLPVDERTAEYAAIKYAEKLGLND CCCHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCC VVVLGKLPMHPAEGTYVEVRGRVQFSIDKNELEIPPQEEILSDEEIEGDIKRKPMKVVAA EEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCHHHCCEEEEEE TVGNDEHSVGLREILDIKHGGIEKYGIKFTYLGTSCPAEKLVDAAIEENADAILVSTIIT ECCCCCCCHHHHHHHHHCCCCCEEECEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECC HDDVHIKNMKKIHDFCVEKGIRDKVILVGGGTQITIDLAKSVGFDAGFGRGTKGNQVASF CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHCCCCCCCCCCCCCHHHHHH LVKKRREKENEENN HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA