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The map label for this gene is csoR [H]

Identifier: 167040113

GI number: 167040113

Start: 1509083

End: 1509349

Strand: Direct

Name: csoR [H]

Synonym: Teth514_1475

Alternate gene names: 167040113

Gene position: 1509083-1509349 (Clockwise)

Preceding gene: 167040112

Following gene: 167040114

Centisome position: 61.41

GC content: 34.83

Gene sequence:

>267_bases
ATGTACCAAGATAGCAAAGGAGATTTATTGAGAAGATTAAGAAAAATTGAAGGACAAGTAAAAGGCATACAAAAAATGAT
TGAAAATGACGCCCATTGTGTAGATGTACTGGTACAAGTAACTGCTGTTAGGTCTGCGATAAACAGCGTTGGTAAAATTC
TTCTTAAAAGCTATACTACCAGCTGTGTAAAGGGAGCAATGTGCACTGAAAAGCAGGATGACATGATAGAGGAATTAGTT
GAGACATTTATAAAATTTATGAAGTGA

Upstream 100 bases:

>100_bases
GTTAAGGATTTATTAAAAAAATAACAAAAGGCTATTGACATATCTGTGAAAAACTTTTATACTATTCATTGGATACCCCG
ATGGGGTTGGGAGGTATAGT

Downstream 100 bases:

>100_bases
TTTTAAAAGTTAGGTTTTGTGAGCAATTTGTTTTATAATAAATGTATAAAGCAATTGCTTTGTATAAAAATAAAAATGAA
ATAAGAGTATAGGAGTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MYQDSKGDLLRRLRKIEGQVKGIQKMIENDAHCVDVLVQVTAVRSAINSVGKILLKSYTTSCVKGAMCTEKQDDMIEELV
ETFIKFMK

Sequences:

>Translated_88_residues
MYQDSKGDLLRRLRKIEGQVKGIQKMIENDAHCVDVLVQVTAVRSAINSVGKILLKSYTTSCVKGAMCTEKQDDMIEELV
ETFIKFMK
>Mature_88_residues
MYQDSKGDLLRRLRKIEGQVKGIQKMIENDAHCVDVLVQVTAVRSAINSVGKILLKSYTTSCVKGAMCTEKQDDMIEELV
ETFIKFMK

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9969; Mature: 9969

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQDSKGDLLRRLRKIEGQVKGIQKMIENDAHCVDVLVQVTAVRSAINSVGKILLKSYTT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCVKGAMCTEKQDDMIEELVETFIKFMK
HHHHHHHCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MYQDSKGDLLRRLRKIEGQVKGIQKMIENDAHCVDVLVQVTAVRSAINSVGKILLKSYTT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCVKGAMCTEKQDDMIEELVETFIKFMK
HHHHHHHCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]