Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
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Accession | NC_010320 |
Length | 2,457,259 |
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The map label for this gene is trxA [H]
Identifier: 167040076
GI number: 167040076
Start: 1469749
End: 1470072
Strand: Direct
Name: trxA [H]
Synonym: Teth514_1436
Alternate gene names: 167040076
Gene position: 1469749-1470072 (Clockwise)
Preceding gene: 167040075
Following gene: 167040078
Centisome position: 59.81
GC content: 34.26
Gene sequence:
>324_bases ATGAAACCAGTAAATGTCACAGATGAGACTTTTGCAGAGGAAGTATACAATTCTAATAAACCTGTTTTAGTAGATTTTTG GGCTAAATGGTGTAGACCCTGTTTAATGATGGCTCCAGTGTTAGAGGAGTTTGCGGAAGAATACGCAGATAAGATGAAAG TGGCAAAACTGGATGTAGATGAAAATCCAGTAATCGCTTCTAAATATAGAATTATGAGCATACCTACGATGGGAGTTTTT GTAAATGGAAAAATGGTAGACAAAGTTATAGGTTTTATGCCTAAAGAGCATTTAGTTGAAAAGCTGTCAAAATATTTAAA ATAG
Upstream 100 bases:
>100_bases GCAATGGGGCTATGACATATGACGAAATTGAAGAGTATTATAAATCAATTTCTCGATAAATGAAAATGTACAAAAGCAAG TAGAAGGAGTGTATACACAA
Downstream 100 bases:
>100_bases CTACTAAAAAAGGAGTATCTTTTTGTGAAAGATACTCCTTTTTTAGTAAAACATTATGCTATCACGTTTAAAACTTGCCG GTCATTTACTACTTTTATAT
Product: thioredoxin
Products: NA
Alternate protein names: Trx-1; Thioredoxin-M [H]
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MKPVNVTDETFAEEVYNSNKPVLVDFWAKWCRPCLMMAPVLEEFAEEYADKMKVAKLDVDENPVIASKYRIMSIPTMGVF VNGKMVDKVIGFMPKEHLVEKLSKYLK
Sequences:
>Translated_107_residues MKPVNVTDETFAEEVYNSNKPVLVDFWAKWCRPCLMMAPVLEEFAEEYADKMKVAKLDVDENPVIASKYRIMSIPTMGVF VNGKMVDKVIGFMPKEHLVEKLSKYLK >Mature_107_residues MKPVNVTDETFAEEVYNSNKPVLVDFWAKWCRPCLMMAPVLEEFAEEYADKMKVAKLDVDENPVIASKYRIMSIPTMGVF VNGKMVDKVIGFMPKEHLVEKLSKYLK
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=96, Percent_Identity=36.4583333333333, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI87082331, Length=105, Percent_Identity=44.7619047619048, Blast_Score=105, Evalue=6e-25, Organism=Escherichia coli, GI1788936, Length=103, Percent_Identity=35.9223300970874, Blast_Score=80, Evalue=2e-17, Organism=Escherichia coli, GI87081747, Length=104, Percent_Identity=34.6153846153846, Blast_Score=71, Evalue=1e-14, Organism=Caenorhabditis elegans, GI212646193, Length=90, Percent_Identity=37.7777777777778, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17509965, Length=81, Percent_Identity=39.5061728395062, Blast_Score=66, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6321648, Length=78, Percent_Identity=46.1538461538462, Blast_Score=75, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323072, Length=77, Percent_Identity=46.7532467532467, Blast_Score=73, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6319925, Length=89, Percent_Identity=34.8314606741573, Blast_Score=67, Evalue=7e-13, Organism=Drosophila melanogaster, GI28573567, Length=98, Percent_Identity=38.7755102040816, Blast_Score=87, Evalue=2e-18, Organism=Drosophila melanogaster, GI21358065, Length=90, Percent_Identity=37.7777777777778, Blast_Score=73, Evalue=4e-14, Organism=Drosophila melanogaster, GI24639826, Length=84, Percent_Identity=40.4761904761905, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI24664269, Length=75, Percent_Identity=42.6666666666667, Blast_Score=71, Evalue=1e-13, Organism=Drosophila melanogaster, GI17648013, Length=74, Percent_Identity=44.5945945945946, Blast_Score=66, Evalue=3e-12, Organism=Drosophila melanogaster, GI24583090, Length=74, Percent_Identity=44.5945945945946, Blast_Score=66, Evalue=3e-12, Organism=Drosophila melanogaster, GI24639068, Length=83, Percent_Identity=34.9397590361446, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 12336; Mature: 12336
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVNVTDETFAEEVYNSNKPVLVDFWAKWCRPCLMMAPVLEEFAEEYADKMKVAKLDVD CCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ENPVIASKYRIMSIPTMGVFVNGKMVDKVIGFMPKEHLVEKLSKYLK CCCEECCCEEEEECCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKPVNVTDETFAEEVYNSNKPVLVDFWAKWCRPCLMMAPVLEEFAEEYADKMKVAKLDVD CCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ENPVIASKYRIMSIPTMGVFVNGKMVDKVIGFMPKEHLVEKLSKYLK CCCEECCCEEEEECCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2492995 [H]