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The map label for this gene is stc [H]

Identifier: 167039015

GI number: 167039015

Start: 358220

End: 358993

Strand: Direct

Name: stc [H]

Synonym: Teth514_0348

Alternate gene names: 167039015

Gene position: 358220-358993 (Clockwise)

Preceding gene: 167039014

Following gene: 167039016

Centisome position: 14.58

GC content: 29.07

Gene sequence:

>774_bases
ATGGGAGATATAAAGTCTAATGAAATACTTTTTTCTTATAAAAAGTGTCTGGAAATAGGACTTACAAAATCGATAGTTAC
TCCATTAATATCTTTAGAAGAAGATGAATTGAAAAAGAGATTACAAGAGAATAAAAAACTTATAGAAGTTTTTAGAAAAT
GTGTTAATAGGGTACGTACACAATTGAAGAAAAGATATATTTTTTTGCTGGTAGATAGTGAAGGATACCTTTTAGATGTT
TTATACAACAAAAAAATATACAAGGATATTACTGACTTAGGCATTAGGAGAGGAACCTCTTTTAAGGAGGAAAGCTGTGG
GACAAATGCCATTTCATTGGCTATGAAATTAAAGCAGCCAATTTACTTAAAACCGGAAGAGCATTATTGTGATATTTTCA
AACAATGGTACTGTATAGCCACGCCTTTTCACATAGATAATCAGATAGTAGGCTATTTGGATATATCAATAATAGAACAT
AATATGGCAGATGAAATGATGGGATTTATAGATTTATTAGTATATAAAATTGCCAACGAATATAAAAGAGAAATGGATTT
AGAATCACAAGAAGACCTTGAAAAATTGACAGATAAACAGATTGAAATAATAAAAAAGTGTGCAAAAGGATACACAGAAT
TAGCTATATCGATGGAACTCGGACTAAAACCATCTACGGTAAAGTATCATAAAAAAGAAATTATTAAAAAATTGCGAGTA
AAAAACTTTCAACAGGCGATTGCAAAAGCTATTAAGCTTAATTTAATAGATTAA

Upstream 100 bases:

>100_bases
TTTATCAGCTTCTATAATAATGCTTTTAGAAGCGGGAATGTTTTTGCTCTTTGCAAATTATATATTTGAGAGGTTGGAGC
TGAAGTGAGGGAAAATTTTG

Downstream 100 bases:

>100_bases
ATTTGGACTATACTTTTGTATAGTTTTTTTATTTTTTTGCTAAAACTATACAAAGATATAGTAGACATTGAAAAAAATGT
ATTATAAAATAAAAATGAAT

Product: regulatory protein LuxR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MGDIKSNEILFSYKKCLEIGLTKSIVTPLISLEEDELKKRLQENKKLIEVFRKCVNRVRTQLKKRYIFLLVDSEGYLLDV
LYNKKIYKDITDLGIRRGTSFKEESCGTNAISLAMKLKQPIYLKPEEHYCDIFKQWYCIATPFHIDNQIVGYLDISIIEH
NMADEMMGFIDLLVYKIANEYKREMDLESQEDLEKLTDKQIEIIKKCAKGYTELAISMELGLKPSTVKYHKKEIIKKLRV
KNFQQAIAKAIKLNLID

Sequences:

>Translated_257_residues
MGDIKSNEILFSYKKCLEIGLTKSIVTPLISLEEDELKKRLQENKKLIEVFRKCVNRVRTQLKKRYIFLLVDSEGYLLDV
LYNKKIYKDITDLGIRRGTSFKEESCGTNAISLAMKLKQPIYLKPEEHYCDIFKQWYCIATPFHIDNQIVGYLDISIIEH
NMADEMMGFIDLLVYKIANEYKREMDLESQEDLEKLTDKQIEIIKKCAKGYTELAISMELGLKPSTVKYHKKEIIKKLRV
KNFQQAIAKAIKLNLID
>Mature_256_residues
GDIKSNEILFSYKKCLEIGLTKSIVTPLISLEEDELKKRLQENKKLIEVFRKCVNRVRTQLKKRYIFLLVDSEGYLLDVL
YNKKIYKDITDLGIRRGTSFKEESCGTNAISLAMKLKQPIYLKPEEHYCDIFKQWYCIATPFHIDNQIVGYLDISIIEHN
MADEMMGFIDLLVYKIANEYKREMDLESQEDLEKLTDKQIEIIKKCAKGYTELAISMELGLKPSTVKYHKKEIIKKLRVK
NFQQAIAKAIKLNLID

Specific function: Unknown

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00989 PAS; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 30075; Mature: 29944

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDIKSNEILFSYKKCLEIGLTKSIVTPLISLEEDELKKRLQENKKLIEVFRKCVNRVRT
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLKKRYIFLLVDSEGYLLDVLYNKKIYKDITDLGIRRGTSFKEESCGTNAISLAMKLKQP
HHHHCEEEEEECCCCCEEEHHHCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCC
IYLKPEEHYCDIFKQWYCIATPFHIDNQIVGYLDISIIEHNMADEMMGFIDLLVYKIANE
EEECCHHHHHHHHHHHHHHCCCEECCCCEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH
YKREMDLESQEDLEKLTDKQIEIIKKCAKGYTELAISMELGLKPSTVKYHKKEIIKKLRV
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEHCCCCCCCHHHHHHHHHHHHHHH
KNFQQAIAKAIKLNLID
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDIKSNEILFSYKKCLEIGLTKSIVTPLISLEEDELKKRLQENKKLIEVFRKCVNRVRT
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLKKRYIFLLVDSEGYLLDVLYNKKIYKDITDLGIRRGTSFKEESCGTNAISLAMKLKQP
HHHHCEEEEEECCCCCEEEHHHCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCC
IYLKPEEHYCDIFKQWYCIATPFHIDNQIVGYLDISIIEHNMADEMMGFIDLLVYKIANE
EEECCHHHHHHHHHHHHHHCCCEECCCCEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH
YKREMDLESQEDLEKLTDKQIEIIKKCAKGYTELAISMELGLKPSTVKYHKKEIIKKLRV
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEHCCCCCCCHHHHHHHHHHHHHHH
KNFQQAIAKAIKLNLID
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA