| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is natB [H]
Identifier: 167039008
GI number: 167039008
Start: 351970
End: 353154
Strand: Direct
Name: natB [H]
Synonym: Teth514_0341
Alternate gene names: 167039008
Gene position: 351970-353154 (Clockwise)
Preceding gene: 167039007
Following gene: 167039009
Centisome position: 14.32
GC content: 31.81
Gene sequence:
>1185_bases TTGAAGTTTAAGCATGTATACATAGTTTTAAAAAAAGAATTAAGGGACATTTTTAGAGATAAAAAGACATGGATTGTGAC AATTTTACTTCCTGCTCTTTTTATTCCTATAATGATGTACATAGTAATAGGTGGAGCAGAAAGCATATCAGATCAAAAAA TAAGCGATACAAAAATAGTAGTTTTGGATGAAGGAAATAATGTAAAATTTATAAATTATTTAAAATCAACAGGAATGAGT ATAGTAACGGATTTGCAAAATCCCAAAGAAAGTCTTGAAAAAGGCGATATAAGGGCAATTGTAGTTATACCTTCTGATTT TGATAAAAATATAGAAGAAGGCAAAAACGCTGATTTGGTAATTCAGGTAGACATGTCAAATATGAAATCTTCAAATGCAG AGAATATGATAAGAGGTCTTATAAAAGAATATGCGAATAATATTGTAAAAGAAAGACTTATAGCAAAAGGGATAGATCCT AAAATATTAGATCCAATTGAAGTAAAAACTGAAAACATAGCTTCACAAAGTAAAATGGCAGGTTCTTTTTTAGCATTCAT TGTACCAATGCTTTTGACTTTATGGACGGCAACAGGAGGTATGGGAGCAGCTGTTGATTTGGCAGCAGGTGAGAAAGAAA GAGGTACGTTAGAACCTTTACTTACGACTTCTGCATCAAGGCTTTCTATAATGGCAGGCAAATACTTAGCTGTAACAACC ATGGCACTTATAAGTGCTATTGCTTCACTTTTGGGACTTTTTGCTTCCTTTTCTTTAAATAAAGATATGGCATCTTTAAA TGCCGATTTTAGGTTGAGTACAACGGCAATAGTTGTCATGTTCGTGGCTGCCTTTTTTACAGCATCAATATTTGCTGCAC TGGAGCTTGCTTTAAGTGCATATGCAAAATCTTTTAAAGAAGGGCAGACATATATTTCACCTTTAATGTTTATTGCAATA ATTCCGGCATATTTGGTGATGTATAAAATGCCAAATGAAATACCTATATCTTATTTTGCAATACCTGTATTTGGGACTAT TTCAATATTTAAAGAATTACTTTATGGAATTATTAATATGACACACATAGGGATATTTGTATTTTCATCAATAGTATATG TGGCTATTAGTATATATATAGCAGCACTAATGTTTAAACAGGAATGGGCATTATTTAGGGTGTGA
Upstream 100 bases:
>100_bases AAAGGAAAACTTATAGAAGAAGGGACTATAAAAGATTTAAAGGAGAAATACAAAACAGACAATCTTGAAGAATTATTTAT GGAATTGGTAGGTGAGAAAA
Downstream 100 bases:
>100_bases AAATAGTCTCGGAATATATAGTTTCTCCTAATATTTTTAAGTATTCGTTAAGATGATGTTATTATAAATTGTTTGCTACG GATAACATTAATAACTTTTA
Product: ABC-2 type transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKFKHVYIVLKKELRDIFRDKKTWIVTILLPALFIPIMMYIVIGGAESISDQKISDTKIVVLDEGNNVKFINYLKSTGMS IVTDLQNPKESLEKGDIRAIVVIPSDFDKNIEEGKNADLVIQVDMSNMKSSNAENMIRGLIKEYANNIVKERLIAKGIDP KILDPIEVKTENIASQSKMAGSFLAFIVPMLLTLWTATGGMGAAVDLAAGEKERGTLEPLLTTSASRLSIMAGKYLAVTT MALISAIASLLGLFASFSLNKDMASLNADFRLSTTAIVVMFVAAFFTASIFAALELALSAYAKSFKEGQTYISPLMFIAI IPAYLVMYKMPNEIPISYFAIPVFGTISIFKELLYGIINMTHIGIFVFSSIVYVAISIYIAALMFKQEWALFRV
Sequences:
>Translated_394_residues MKFKHVYIVLKKELRDIFRDKKTWIVTILLPALFIPIMMYIVIGGAESISDQKISDTKIVVLDEGNNVKFINYLKSTGMS IVTDLQNPKESLEKGDIRAIVVIPSDFDKNIEEGKNADLVIQVDMSNMKSSNAENMIRGLIKEYANNIVKERLIAKGIDP KILDPIEVKTENIASQSKMAGSFLAFIVPMLLTLWTATGGMGAAVDLAAGEKERGTLEPLLTTSASRLSIMAGKYLAVTT MALISAIASLLGLFASFSLNKDMASLNADFRLSTTAIVVMFVAAFFTASIFAALELALSAYAKSFKEGQTYISPLMFIAI IPAYLVMYKMPNEIPISYFAIPVFGTISIFKELLYGIINMTHIGIFVFSSIVYVAISIYIAALMFKQEWALFRV >Mature_394_residues MKFKHVYIVLKKELRDIFRDKKTWIVTILLPALFIPIMMYIVIGGAESISDQKISDTKIVVLDEGNNVKFINYLKSTGMS IVTDLQNPKESLEKGDIRAIVVIPSDFDKNIEEGKNADLVIQVDMSNMKSSNAENMIRGLIKEYANNIVKERLIAKGIDP KILDPIEVKTENIASQSKMAGSFLAFIVPMLLTLWTATGGMGAAVDLAAGEKERGTLEPLLTTSASRLSIMAGKYLAVTT MALISAIASLLGLFASFSLNKDMASLNADFRLSTTAIVVMFVAAFFTASIFAALELALSAYAKSFKEGQTYISPLMFIAI IPAYLVMYKMPNEIPISYFAIPVFGTISIFKELLYGIINMTHIGIFVFSSIVYVAISIYIAALMFKQEWALFRV
Specific function: Involved in ATP-dependent electrogenic sodium extrusion [H]
COG id: COG1668
COG function: function code CP; ABC-type Na+ efflux pump, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787011, Length=261, Percent_Identity=24.5210727969349, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43495; Mature: 43495
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKHVYIVLKKELRDIFRDKKTWIVTILLPALFIPIMMYIVIGGAESISDQKISDTKIV CCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE VLDEGNNVKFINYLKSTGMSIVTDLQNPKESLEKGDIRAIVVIPSDFDKNIEEGKNADLV EEECCCCEEHHHHHHHCCHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCHHHCCCCCCEE IQVDMSNMKSSNAENMIRGLIKEYANNIVKERLIAKGIDPKILDPIEVKTENIASQSKMA EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GSFLAFIVPMLLTLWTATGGMGAAVDLAAGEKERGTLEPLLTTSASRLSIMAGKYLAVTT HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHCHHHHHHH MALISAIASLLGLFASFSLNKDMASLNADFRLSTTAIVVMFVAAFFTASIFAALELALSA HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAKSFKEGQTYISPLMFIAIIPAYLVMYKMPNEIPISYFAIPVFGTISIFKELLYGIINM HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH THIGIFVFSSIVYVAISIYIAALMFKQEWALFRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFKHVYIVLKKELRDIFRDKKTWIVTILLPALFIPIMMYIVIGGAESISDQKISDTKIV CCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE VLDEGNNVKFINYLKSTGMSIVTDLQNPKESLEKGDIRAIVVIPSDFDKNIEEGKNADLV EEECCCCEEHHHHHHHCCHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCHHHCCCCCCEE IQVDMSNMKSSNAENMIRGLIKEYANNIVKERLIAKGIDPKILDPIEVKTENIASQSKMA EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GSFLAFIVPMLLTLWTATGGMGAAVDLAAGEKERGTLEPLLTTSASRLSIMAGKYLAVTT HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHCHHHHHHH MALISAIASLLGLFASFSLNKDMASLNADFRLSTTAIVVMFVAAFFTASIFAALELALSA HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAKSFKEGQTYISPLMFIAIIPAYLVMYKMPNEIPISYFAIPVFGTISIFKELLYGIINM HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH THIGIFVFSSIVYVAISIYIAALMFKQEWALFRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9106203; 9384377 [H]