Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

Click here to switch to the map view.

The map label for this gene is rbsA [C]

Identifier: 167039005

GI number: 167039005

Start: 350531

End: 350680

Strand: Direct

Name: rbsA [C]

Synonym: Teth514_0338

Alternate gene names: 167039005

Gene position: 350531-350680 (Clockwise)

Preceding gene: 167039004

Following gene: 167039006

Centisome position: 14.27

GC content: 33.33

Gene sequence:

>150_bases
ATGGATAGTGTACTTTCTGTAAAAAATCTAAAAAAGTATTATAGCAAGGTAAAAGCAGTTGATGGGATTTCATTTGAGAT
GTATCCTGGAGAAGTTGTAGTGCTTATAGGTCCAAATGGTGCAGGGAAAAGTACTACTTTAAAGATTTGA

Upstream 100 bases:

>100_bases
TTTTGTAGAATTTATAGTATTGTGTTCCAGTGATTGTTCTTTATTATGGTTTGAGAGATTATAATTTGCATTTAAAATTC
TGCATAAACGGAGGTCGAAG

Downstream 100 bases:

>100_bases
TAGTGAGATGGGAGTGAGAGCTATGTCAAAAGAAAGAGAATATTATTACATAGGAAAGAGAAGAGGTGCTGATATATGGA
AGCTTATACTTAAATATGGT

Product: sugar ABC transporter ATPase-like protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: ABC Transporter Related Protein

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MDSVLSVKNLKKYYSKVKAVDGISFEMYPGEVVVLIGPNGAGKSTTLKI

Sequences:

>Translated_49_residues
MDSVLSVKNLKKYYSKVKAVDGISFEMYPGEVVVLIGPNGAGKSTTLKI
>Mature_49_residues
MDSVLSVKNLKKYYSKVKAVDGISFEMYPGEVVVLIGPNGAGKSTTLKI

Specific function: Part Of The Binding-Protein-Dependent Transport System For Ribose. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5276; Mature: 5276

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSVLSVKNLKKYYSKVKAVDGISFEMYPGEVVVLIGPNGAGKSTTLKI
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCEEEEC
>Mature Secondary Structure
MDSVLSVKNLKKYYSKVKAVDGISFEMYPGEVVVLIGPNGAGKSTTLKI
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA