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The map label for this gene is rne

Identifier: 165976871

GI number:

Start: 1613145

End: 1616132

Strand: Reverse

Name: rne

Synonym: APJL_1468

Alternate gene names: NA

Gene position: NA

Preceding gene: 165976873

Following gene: 165976870

Centisome position: NA

GC content: NA

Gene sequence:

>2988_bases
ATGAAAAGAATGTTAATCAATGCGACTCAAAAAGAAGAGTTGCGCGTTGCGCTCGTTGACGGGCAACGTTTATTCGATTT
AGATATCGAAAGCCCGGGACACGAACAAAAAAAATCCAATATCTACAAAGGGAAAATTACTCGTGTCGAGCCAAGTCTTG
AAGCCGCATTCGTAGATTACGGTGCGGAACGTCACGGTTTCCTTCCGTTAAAAGAAATCTCTCGCGAATACTTCCCTGCG
GATTACGTATTCAACGGTCGCCCGAATATCAAAGATATTATCAAAGAAGGGCAAGAAGTGATCGTGCAAGTGAGTAAAGA
AGAACGTGGCAATAAAGGCGCTGCGCTCACCACATTTATCTCGCTTGCCGGTAGTTATTTAGTGTTAATGCCGAATAACC
CGCGTGCGGGCGGTATTTCTCGCCGCATCGAAGGCGACGAACGCTTGGAATTAAAAGAAGCGTTAGATTGCTTGGACGTG
CCGGAAGACGTCGGTTTAATCGTACGTACTGCCGGTGTGGGTAAATCGCCGGAAGAACTTCAATGGGACTTAAAAGTTCT
GTTACATCATTGGGAAGCGATCAAAAAAGCGGCGGAATCTCGTCCTGCACCATTCCTTATCCATCAAGAAAGTGATGTGA
TTGTACGTGCAATTCGTGATTACCTCCGCCGTGATATCGGTGAAATCTTAATTGATAATAAAAAGATCTTCGAAAAAGCA
AAAAATCATATTCGTTTAGTACGTCCAGATTTTATTAATCGTGTGCGTTTATACGAAGGCGAAGTACCGCTATTCAGTCA
TTATCAAATCGAATCGCAAATCGAATCGGCGTTCCAACGTGAAGTGCGTTTACCGTCCGGCGGTTCAATCGTTATCGACG
TGACCGAAGCATTAACGGCGATTGACATTAACTCGTCACGCTCAACCCGCGGCGGCGATATCGAAGAAACTGCGTTAAAT
ACCAACTTAGAAGCGGCGGACGAAATTGCACGTCAATTACGTTTACGCGACTTAGGCGGTTTGATTGTCATCGATTTTAT
CGATATGACTCCGGTTCGTCACCAACGCGAAGTGGAAAACCGTATCCGTGAAGCGACACGCCAAGATCGTGCACGTATTC
AGTTCAGTCGTATTTCACGTTTCGGCTTATTAGAAATGAGCCGTCAGCGTTTAAGCCCGTCACTCAGCGAAGCGTCAAGT
CACGTATGTCCTCGTTGCCAAGGTACGGGTAAAGTACGTGATAACGAATCTATCGCACTTTCAATTTTACGTTTATTGGA
AGAAGAAGCGATCAAAGAAAATACCGCACAAGTTCACACCATCGTGCCGGTACAAATTGCCTCTTACTTACTCAACGAAA
AACGTAAAGCGATTTCAAGTATTGAGAAACGCCACGATGTACAAGTGGTGGTTGTACCGACAGAAAGCATGGAAACACCG
CATTTCAGCGTCTATCGTTTACGTGAAAACGAAGTGCTACCGACACTGAGTTATGATTTAGCGAAGCATTATCATGATCG
TGAAGAAGATACTCAACTAAATACACATACAGTTTCAGAAGAAGTATTAGTAACACGTAATGAGCCGGTTATTACGGTGG
AATCCGTATTACAAAGTTCCGAGTTAAATCTTCAACCGGCACCGACACCGGTAGAGCCGGCAAAACCTTCGCTCCTAAGT
CGCTTAATTGCAAAAGTGAAAAGTTTCTTCGCACCTGAAGAAAAAGCGGAAGAAAAACCGAAGCCGAAAGCACGTAACCA
GCATGATCGTCGTAATCGTCGCGAACGTCCGAATCGTGTTGATCGTCAAGAGCGCAAACAAACGCAAGCGCAAGACGAGC
AAAAAGCGCAACGTCAGGAACGTAATCAAGAACGTAATGAGGCGAAAAAAGCGCGCCGCCAAGTAGTTGAAGAAGTTGCC
GGTGTTCAAGAAACACAAACGGAACAACGTTCGAACAAAGACAACGCGACGACAGAACGCCGCCAACGTCGTGATTTACG
TAAAAAAGTACGCGTAGAAAACGTTGAAGCATCGGTTGCCACCACTGAGCCGAGTACGCAACCGATTGAAGAAAAAGTGC
AAAATATCGCGCAAATTCAACCGCTAGTCGCACAAGAAACTCAACCTGAAACGGTTAATGAAGAGCGTCAAGATGTTCGT
GAAAACGGTCGTCAGCGTCGTCTTCCTCGTCATCTTCGTGTGGGTAACCAACGCCGTCGAGACAACAATAACCGTAAAGA
AAATGTTGTGGCGGCAATGCCTTTAGCGGCGGCGGTTGCATCGCCGGAAATGGCAAGCGGTAAGATTTGGGTGAAATTCA
GCGAACCGGTTTCTACAAATAAACCGAATAGCAAAGCGGAAGAAAAAGCGCGTTTCTTATCGGTAGATGAAATGCTTGAG
CAACAAACTACGGAAGTAAATGAGCCGATTGTAGAAAGCAATATCGAGAACAATAGCGCAAGTTCCGTTGCGCCGGTTGT
CGGCTTTATTAAACAGCAATCGGATCGTGATTTGGTTAAAGAAAACAAAGCGCGTTTACACCATCAGGTTGAAGAAAGCG
AACAAGCGGACGAACAACTGGTTGAAAAAGCAATGGCAAAACACGTTGCGCCGTTAGGCGGTTTTGTTTCTCAACATTCT
GATCGTGATCTTGTCAAAGAGAAGAACGAACGAGTACAAAAATTCCAAGCGCAAGCGACACAAGCCCCGGCAATTGGAAA
TGCTACGGCGGAAGCTATTAGCGTGCCGGTTTCCAATTACCAAAGTGACTATAGCTTTAACGGTCGTTTAGGTACATTCT
CTCGAGTAATGCACACTAAAGCCGAAATGACGGTTGCTTCTGCGCCGGAAAAAGCGTTGGAAACAGTTACGGTAAACGAA
TGGACTCAATCAAAATACTATTTCTACGGAAAAGGTTTTGGCGGACATTCAAGTGCGGTGAGCCATGTTCACTCCGCCCC
TCGTGTTGCCAATACGGATCATGAATAA

Upstream 100 bases:

>100_bases
ATGTAACAAAATGGATTTAACTTTGCGCATTACTGCCATATAAAAGGACGTTTAATTCTGTCGGCAATGTAAAAACAAAA
ATGAAAAATGAGAAAACACA

Downstream 100 bases:

>100_bases
CAGATAATCTTTTGGATCGAAAGCCGATTGAAACTTCAATCGGCTTTTTTCATCAAAAAGCAATATTTTCGGAAACTTAT
TTTATAAACTGTGTTCTAAG

Product: ribonuclease E

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>995_residues
MKRMLINATQKEELRVALVDGQRLFDLDIESPGHEQKKSNIYKGKITRVEPSLEAAFVDYGAERHGFLPLKEISREYFPA
DYVFNGRPNIKDIIKEGQEVIVQVSKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERLELKEALDCLDV
PEDVGLIVRTAGVGKSPEELQWDLKVLLHHWEAIKKAAESRPAPFLIHQESDVIVRAIRDYLRRDIGEILIDNKKIFEKA
KNHIRLVRPDFINRVRLYEGEVPLFSHYQIESQIESAFQREVRLPSGGSIVIDVTEALTAIDINSSRSTRGGDIEETALN
TNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVENRIREATRQDRARIQFSRISRFGLLEMSRQRLSPSLSEASS
HVCPRCQGTGKVRDNESIALSILRLLEEEAIKENTAQVHTIVPVQIASYLLNEKRKAISSIEKRHDVQVVVVPTESMETP
HFSVYRLRENEVLPTLSYDLAKHYHDREEDTQLNTHTVSEEVLVTRNEPVITVESVLQSSELNLQPAPTPVEPAKPSLLS
RLIAKVKSFFAPEEKAEEKPKPKARNQHDRRNRRERPNRVDRQERKQTQAQDEQKAQRQERNQERNEAKKARRQVVEEVA
GVQETQTEQRSNKDNATTERRQRRDLRKKVRVENVEASVATTEPSTQPIEEKVQNIAQIQPLVAQETQPETVNEERQDVR
ENGRQRRLPRHLRVGNQRRRDNNNRKENVVAAMPLAAAVASPEMASGKIWVKFSEPVSTNKPNSKAEEKARFLSVDEMLE
QQTTEVNEPIVESNIENNSASSVAPVVGFIKQQSDRDLVKENKARLHHQVEESEQADEQLVEKAMAKHVAPLGGFVSQHS
DRDLVKEKNERVQKFQAQATQAPAIGNATAEAISVPVSNYQSDYSFNGRLGTFSRVMHTKAEMTVASAPEKALETVTVNE
WTQSKYYFYGKGFGGHSSAVSHVHSAPRVANTDHE

Sequences:
NA

Specific function: NA

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA