Definition | Actinobacillus pleuropneumoniae serovar 3 str. JL03, complete genome. |
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Accession | NC_010278 |
Length | 2,242,062 |
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The map label for this gene is rluD
Identifier: 165976548
GI number:
Start: 1263333
End: 1264310
Strand: Direct
Name: rluD
Synonym: APJL_1141
Alternate gene names: NA
Gene position: NA
Preceding gene: 165976541
Following gene: 165976556
Centisome position: NA
GC content: NA
Gene sequence:
>978_bases ATGACTCAACAAATGACATTAACGGCGGAAGTCACCGCCGACTTATTAGGCTGTCGTCTTGACCAAGCCCTCGCTCAGCT TTTTCCCGACTATTCTCGTTCTAGAATAAAAGTGTGGATTGAGAGCGATTTAGTAAAAGTAAACGGTATAGTTGTAAATA AAGCGCGTGAAAAAGTTTTCGGCGGCGAGCAAGTCGAAATTCAAGCGGAAATCGAAGAAGAAATTCGTTTCGAGCCGCAA GACATTCCGCTAAATATCGTGTATGAAGACGATGATATTATCGTAATTAATAAACCGAAAGATCTGGTTGTCCACCCCGG GGCAGGGAATCCGGACGGTACGGTGCTGAATGCGTTATTGCATTACTACCCGCCGATTGCCGAAGTACCTCGTGCCGGTA TCGTACACCGTTTGGATAAAGACACGACCGGTTTAATGGTGGTAGCAAAAAATATTCCGGCGCAAACCCATTTAGTCACC GCACTCCAAAAACGTCGTATTACCCGTGAATATGAAGCGGTGGCAAGCGGGGTAATGACGCAAGGCGGTAAAGTGGACGA GCCGATGGCACGCCATCCGACCAAACGCACCGCAATGGCGGTACACCCGATGGGTAAGCCGGCGGTAACTCATTATCGTA TAATGGAGCGTTTCCGTAACTATACTCGCCTACGCTTACGCTTGGAAACCGGACGTACTCACCAAATTCGCGTACATATG GCGCATATTGCTCACCCGTTATTAGGTGATCAACTGTATGGCGGTCGTCCTCGTCCGCCAAAGGGGGCGAGCGAAGAATT TTTAGCGGTGTTACGCGGTTTCCAACGCCAAGCGTTACACGCAACCATGCTGCGCTTAGAACACCCGATTACCGGCGAAT TGATGGAATGGCACGCACCGCTACCGGACGATTTCGTCGAATTAATCGAAGCCTTAAAAGCCGATTATCAGCTTTATAAA GACGATTTGGATTATTAA
Upstream 100 bases:
>100_bases TTCGTTTGACCGATGGCACTTTGCTAAGTTCATACAGATATGCCTTATTTTATAGAACCTCGCTAAATAAGCAACAAACA AATTTTGGAATTTATATTTA
Downstream 100 bases:
>100_bases TGAGAAAAGTCCGTAGCCTTAAACGGTTACGGACTTTTTATTTTTACGGCGAGTAAATCAAACAAATAAAGAAAATAAAT ACGGTAACAAATTCTAACAT
Product: 23S rRNA pseudouridine synthase D
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>325_residues MTQQMTLTAEVTADLLGCRLDQALAQLFPDYSRSRIKVWIESDLVKVNGIVVNKAREKVFGGEQVEIQAEIEEEIRFEPQ DIPLNIVYEDDDIIVINKPKDLVVHPGAGNPDGTVLNALLHYYPPIAEVPRAGIVHRLDKDTTGLMVVAKNIPAQTHLVT ALQKRRITREYEAVASGVMTQGGKVDEPMARHPTKRTAMAVHPMGKPAVTHYRIMERFRNYTRLRLRLETGRTHQIRVHM AHIAHPLLGDQLYGGRPRPPKGASEEFLAVLRGFQRQALHATMLRLEHPITGELMEWHAPLPDDFVELIEALKADYQLYK DDLDY
Sequences:
NA
Specific function: NA
COG id: COG0564
COG function: function code J; Pseudouridylate synthases, 23S RNA-specific
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA