Definition Actinobacillus pleuropneumoniae serovar 3 str. JL03, complete genome.
Accession NC_010278
Length 2,242,062

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The map label for this gene is hrpA

Identifier: 165975825

GI number:

Start: 412603

End: 416502

Strand: Reverse

Name: hrpA

Synonym: APJL_0383

Alternate gene names: NA

Gene position: NA

Preceding gene: 165975826

Following gene: 165975824

Centisome position: NA

GC content: NA

Gene sequence:

>3900_bases
ATGAAACCTTCGCGAAAAAATTTCAAAAATAGACCGCTTGATGAGAACCAGAAAGCATTAATCGCAAATTTAAAAGAACT
CACCAATACCGATTACCGCCGTTTACGTGCTCGTATTCACGGCATTTCCTCCATCAAAAAACAAGAAACCAAAAACAACG
TAATTGCGGAAATTGAGCGTGAAATTCTCTCGGCACAAGCAGCCTTCCAAGCTATAAAAGCACAACATTCTAATCTTGAG
ATCACTTATCCCGATTTACCGGTTTCCGCTCGCCGTGAAGAAATCTTAAAACTGATTGCGGAAAATCAGGTGGTGGTGAT
TGCCGGCGAAACCGGTTCGGGTAAAACCACTCAGCTACCGAAAATGTGCTTGGAACTCGGACGTGGCGTAAAAGGCTTGA
TTGGACATACTCAGCCTCGCCGTTTGGCGGCTCGTTCGGTGGCGAATCGTATTGCCGAAGAATTAAAAAGCGAAATGGGC
GCAACAGTCGGTTATAAAGTACGTTTCAATGATCAAGTGGGCGAAAACACCCTTGTGAAATTGATGACGGACGGTATTTT
ACTTGCCGAAATCCAAAACGACCGCTATCTCAATCAATACGATACGCTAATTATTGATGAAGCGCACGAACGCTCGCTCA
ATAACGATTTTATTCTTGGCTATCTGAAACAAATTCTACATAAACGCCCTGATCTAAAAGTGATCATTACCTCGGCAACG
ATTGATGTGGAGCGTTTTTCTCGTCATTTCAACAATGCACCGATTATTGAGGTTTCCGGACGCACCTTTCCGGTGGAAGT
GCGTTATCGCCCTGTTGTTGAGGAAGAAGATCAAGACCAATTACAGGGCATTATTAATGCGGTCGATGAGTTACAAGCCG
AAGGTCGCGGCGATATTTTGATTTTTATGAGCGGTGAACGTGAAATTCGTGACACTGCCGAAGCCCTACAAAAACAAGAG
CTAAAATTCACTGAAATTCTACCGCTTTACGCTCGCCTCTCGGCTGCCGAACAGCAACGCATTTTCCAGCCAAGCGGTCT
AAATCGAGTAATTTTAGCCACCAACGTGGCGGAAACCTCACTCACCATTCCGAATATCAAATATGTAATTGATACCGGTA
CGGCGCGTATTTCTCGCTACAGCTACCGTACCAAAGTGCAACGTTTGCCAATCGAGCCGATCTCTCAAGCCTCCGCCAAC
CAGCGAAAAGGGCGTTGCGGACGAACCAGCGAAGGGATTTGTATCCGCCTCTATTCAGAGGAGGATTTTAACGCACGTCC
GGAATTTACCGATCCGGAAATTCTGCGTACTAATCTCGCTTCGGTTATTTTACAAATGACCTCGCTTGGGCTGTCGGATA
TTGAGGCGTTTCCATTCGTTGATCGTCCGGATACCAGACAGGTGCAGGACGGTATTCGCTTACTAGAAGAATTAGGGGCG
ATTAATGGCAATAAATTAACTACAATCGGTCGCCAACTTGCCCAACTCCCCATCGATCCTCGCTTAGGTCGTATGGCCAT
TTCCGCGGCACAAAACGGTTCATTACACGAAGTGATGATGATTGTCTCTGCGCTTTCGATTCAAGATCCGCGTGAACGCC
CGCAAGAACGCCAACAGGCTGCGGATGAAAAACATCGCCGTTTTGCCGATAAAGATTCTGATTTCTTGGCGTTTGTGAAT
TTATGGCATTACATTCAAACCCAGCAAAAAGAGCTAACCAAAAACCAGTTCCGCAAGCAATGTCAGAAAGATTTTCTCAA
CTATTTACGTGTGCGTGAATGGCAGGATATTTATCATCAATTGCGGCTTGCCGTGCGTGAAATGGGCTTGCCGATTAATA
GTGAAGAAGCAAACTATCAGCAAATTCACACTGCCTTACTAACCGGTTTGCTGTCACATATCGGGCTGAAAGACAGCGAA
AAAATGCACTACCTCGGGGCGAGAAATGCGCATTTTTATGTGTTCCCGACCTCGGCGCTTTTCAAAAAGCAGCCGAAGTG
GCTTACTGCGTCCGAACTGGTAGAAACCACCAAGTTATGGGCAAGAACTGTGGCAAAAATCGAACCGGAATGGATTGAGC
CACTCGCCGGACATTTAATAAAACGCAGTTACAGCGAACCGCATTGGTCGAAATCCAAAGGGGCGGTAATGGCGTATGAA
AAAGTCTCGCTCTACGGTATTCCGGTGGTAGCGAATCGTCTTGTCAATTACGGTTCAATTGATCCGACTGTCAGCCGTGA
AATCTTTATTCGCTCGGCAATGGTTGAGGGCGATTGGCACAATAATTACAAATTTTTCAAAGAAAATAACCGCTTGATCA
AAGAAGTGGAAGACCTCGAACACAAATCTCGCCGCCGAGATATTTTAGTGGACGAACAAACTCTATTCGACTTCTACGAT
CAACGTATCGGAACGGAAGTGGTATCCAGTCGCCATTTTGATACATGGTGGAAAAAAGCGAGTCAAAAAGATCCTGAATT
GCTCAACTTTGAAAAATCATTCTTAATGAATGAAAACGCCAATACGGTCAGCGATTTGGATTTCCCAAATTTCTGGTATC
AAGGTCAGCTTAAACTAAAATTGAGTTACCAATTTGAAATCGGTAAAGATCACGACGGCGTAACCGTGCATATTCCGTTG
CCGTTGCTCAACCAAGTGGAACCGGAAGGCTTTGATTGGCAAATTCCGGGGCTTCGCCACGAGCTAGTGGTAGCGTTAAT
TAAATCTTTACCGAAAGCTGCTCGCCGTAATTTTGTACCGGCACCGAACTATGCGGATGCGTTCTTAGCCAGAGCCGAGC
CATATCAAAAACCATTGATCGAAAGTCTGGCTTACGAGCTTCGTCGTATGACTGGGGTAACGATTGATCCGGAACTGTGG
GATTTGTCGCAACTTGCACCACATTTACGTATGACATTCCGTGTGGTGGATGAAAAAGGCAAAAAACTACAAGAAAGCGA
AAACTTGGACGAACTGAAGTTTGCACTGAAAGATCAGGTGCAAGAAAGCCTTTCGACAATTGCCGATGACGGTATTGAAC
AAAGCGGTGTACATTTGTGGAATTTCGCTAACTTACCGCAATTCTACGAGCAGAAAAAAGCCAATTTCAGCGTAAAAGCC
TACCCGGCAATTGTCGATGAGCAAACCGCAGTGGGCGTAAAATTATTTGAAACCGAATTTGAGCAAACTCGTGCAATGCA
AGCTGGTTTACGCCGTTTGCTATTGCTCAACGTGCCTTCGCCAATCAAATACTTACACGAAAAATTGCCGAACAAAGCAA
AACTTGGACTTTACTTTGCCCCATTCGGTAAAGTGTTGGAATTGATCGATGACTGTATCGCTTGTGCGGTAGATAAATTA
GTGGATGAATTCGGCGGCTTTGTTTGGACCGAAGAAAAATTCAATGAATTGCATGAATTTGTACGAGGCAACTTAAACGA
CACCACCGCAGAAATTGCGCTACAAGTGGAGAAAATCCTCACACTTGCCTTTGAACTCAACAAACGAATGAAAGGCAAAA
TGGACTTCACTATGGCGTTTGCCCTGTCGGATATTAAAGCACAATTAAGCGGTTTGGTTTATCCGGATTTTGTAACCAAA
ACCGGCTACCAACGCCTTGCCGATTTACACCGTTATTTAACCGCTATCGACAAGCGATTGGATAAACTCGGCACGGATAC
CAACACCGACCGAGCGAAGATGTTACGGGTGGAACAGGCGGAAAACGCTTATAAGCAATTACTCACCAAACTGCCGAAAT
CTAAAGCAATTCCAGATGAAGTGTTAGAAATTCGTTATATGATTGAAGAGTTACGTGTCAGTCTGTTCGCCCAACAACTC
GGCACCAAATATCCTATTTCCGATAAGCGGATTTTGAATGTCATTTCTGCAATAAATTAA

Upstream 100 bases:

>100_bases
CCTCCCGATGAAGTGAGGTCTGCAAGCGGTTTCTTCTTCCTACTGTTTCCCCTCAATTTAGGCTATAATTCCTACCAAAA
TAGTTAGTTAAGACAAGACA

Downstream 100 bases:

>100_bases
CATTCCTATAGCATCCCACATAAATTCTTTCACTCTCAAAATATAAGTTTAATTATCCATAAAAAACTTGAGGTAAATCA
AAAAAGATGAGAACTATTTG

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1299_residues
MKPSRKNFKNRPLDENQKALIANLKELTNTDYRRLRARIHGISSIKKQETKNNVIAEIEREILSAQAAFQAIKAQHSNLE
ITYPDLPVSARREEILKLIAENQVVVIAGETGSGKTTQLPKMCLELGRGVKGLIGHTQPRRLAARSVANRIAEELKSEMG
ATVGYKVRFNDQVGENTLVKLMTDGILLAEIQNDRYLNQYDTLIIDEAHERSLNNDFILGYLKQILHKRPDLKVIITSAT
IDVERFSRHFNNAPIIEVSGRTFPVEVRYRPVVEEEDQDQLQGIINAVDELQAEGRGDILIFMSGEREIRDTAEALQKQE
LKFTEILPLYARLSAAEQQRIFQPSGLNRVILATNVAETSLTIPNIKYVIDTGTARISRYSYRTKVQRLPIEPISQASAN
QRKGRCGRTSEGICIRLYSEEDFNARPEFTDPEILRTNLASVILQMTSLGLSDIEAFPFVDRPDTRQVQDGIRLLEELGA
INGNKLTTIGRQLAQLPIDPRLGRMAISAAQNGSLHEVMMIVSALSIQDPRERPQERQQAADEKHRRFADKDSDFLAFVN
LWHYIQTQQKELTKNQFRKQCQKDFLNYLRVREWQDIYHQLRLAVREMGLPINSEEANYQQIHTALLTGLLSHIGLKDSE
KMHYLGARNAHFYVFPTSALFKKQPKWLTASELVETTKLWARTVAKIEPEWIEPLAGHLIKRSYSEPHWSKSKGAVMAYE
KVSLYGIPVVANRLVNYGSIDPTVSREIFIRSAMVEGDWHNNYKFFKENNRLIKEVEDLEHKSRRRDILVDEQTLFDFYD
QRIGTEVVSSRHFDTWWKKASQKDPELLNFEKSFLMNENANTVSDLDFPNFWYQGQLKLKLSYQFEIGKDHDGVTVHIPL
PLLNQVEPEGFDWQIPGLRHELVVALIKSLPKAARRNFVPAPNYADAFLARAEPYQKPLIESLAYELRRMTGVTIDPELW
DLSQLAPHLRMTFRVVDEKGKKLQESENLDELKFALKDQVQESLSTIADDGIEQSGVHLWNFANLPQFYEQKKANFSVKA
YPAIVDEQTAVGVKLFETEFEQTRAMQAGLRRLLLLNVPSPIKYLHEKLPNKAKLGLYFAPFGKVLELIDDCIACAVDKL
VDEFGGFVWTEEKFNELHEFVRGNLNDTTAEIALQVEKILTLAFELNKRMKGKMDFTMAFALSDIKAQLSGLVYPDFVTK
TGYQRLADLHRYLTAIDKRLDKLGTDTNTDRAKMLRVEQAENAYKQLLTKLPKSKAIPDEVLEIRYMIEELRVSLFAQQL
GTKYPISDKRILNVISAIN

Sequences:
NA

Specific function: NA

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA