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Identifier: 16519963

GI number: 16519963

Start: 174426

End: 175301

Strand: Reverse

Name: Not Available

Synonym: NGR_a01420

Alternate gene names: 16519963

Gene position: 175301-174426 (Counterclockwise)

Preceding gene: 16519962

Following gene: 16519964

Centisome position: 32.7

GC content: 57.88

Gene sequence:

>876_bases
ATGGCCCTTACCACTTCGCGCGCTTCGGGATCGCCTCGTATTCAAACCCACACCGTTGTCCGCATCGCAAAGCGGCATCC
GCTGGTCCTCCTCGGGGGAGGGATCCTGCTGTTGCTTATCTTGCTCGCGCTTGCTGCGCCCCTTTACAGCGGTGATCCCT
TGGTGATGGACCCCTTCAAGCGTCTCCAGCAGCCCTCCGCCTCAATGTGGTTCGGCACCGACAACCTGGGGAGGGATGTC
TTCGCCCGAACAATCTATGGAGCGCGCATATCACTCATCGTGGGATTGCTTTCAGCAGTGTGCGCAGCGGTTTGCGGTCT
TTTGATCGGTGTAATCGCCGGCTACAGCCGCACCTTTGATAACATTATCATGCGGGTTATGGACGGACTGATGTCCATCC
CGACGTTCTTGCTCGCTATAGCGCTTCTCTCTCTCACGGGCCCCGGAATTGGGATTCTCATCGTTGCAATTGCGATTCCA
GAAACACCCGCTGTTACGAGATTAGTGCGTTCCGTGGTTCTGAGCGTTCGTTCGCGACCCTATGTAGAAGCAGCGCTGTG
TGGTGGGGCACGCCTGCCTAGGGTGCTTTGGCGGCATATTTTGCCGAGCACCATTCCGCCCTTGATGGTTCAAAGCGCGA
CTGTGTGTGCCAGTGCGATCATGACCGAGGCTGGTTTGAGCTTTATCGGCGTGGGCGTGCCCTCCGAGATCCCAAGTTGG
GGTAATATGATCGCCAACTCACGCCTCTTTCTCGCGATCGCTCCCTTGACGATCTTTGCTCCTGGACTGTGTCTCGCCGT
CACTGTTCTGGCGGTCAACCTGCTCGGGGATGGCCTGCGCGACATGTTCGACCCCCGTTCGAAGCGGAGGCGTTAA

Upstream 100 bases:

>100_bases
TCCAGACCGTGCTGGTCCTAATTTCCGGCCTGTACGTTCTGATCAACCTACTCGTCGATCTTGCCTATACCCTGATCGAT
CCGCGTATCCGGTACTAAAG

Downstream 100 bases:

>100_bases
AATGAGAATGCAATCAAATCCGAAAGCCGATCTGCTTCTGGACGTTCGCGACCTGGAGACGCACTTTTACGGCGAAGAGA
GCGTTACTCGTGCTCTGGGC

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MALTTSRASGSPRIQTHTVVRIAKRHPLVLLGGGILLLLILLALAAPLYSGDPLVMDPFKRLQQPSASMWFGTDNLGRDV
FARTIYGARISLIVGLLSAVCAAVCGLLIGVIAGYSRTFDNIIMRVMDGLMSIPTFLLAIALLSLTGPGIGILIVAIAIP
ETPAVTRLVRSVVLSVRSRPYVEAALCGGARLPRVLWRHILPSTIPPLMVQSATVCASAIMTEAGLSFIGVGVPSEIPSW
GNMIANSRLFLAIAPLTIFAPGLCLAVTVLAVNLLGDGLRDMFDPRSKRRR

Sequences:

>Translated_291_residues
MALTTSRASGSPRIQTHTVVRIAKRHPLVLLGGGILLLLILLALAAPLYSGDPLVMDPFKRLQQPSASMWFGTDNLGRDV
FARTIYGARISLIVGLLSAVCAAVCGLLIGVIAGYSRTFDNIIMRVMDGLMSIPTFLLAIALLSLTGPGIGILIVAIAIP
ETPAVTRLVRSVVLSVRSRPYVEAALCGGARLPRVLWRHILPSTIPPLMVQSATVCASAIMTEAGLSFIGVGVPSEIPSW
GNMIANSRLFLAIAPLTIFAPGLCLAVTVLAVNLLGDGLRDMFDPRSKRRR
>Mature_290_residues
ALTTSRASGSPRIQTHTVVRIAKRHPLVLLGGGILLLLILLALAAPLYSGDPLVMDPFKRLQQPSASMWFGTDNLGRDVF
ARTIYGARISLIVGLLSAVCAAVCGLLIGVIAGYSRTFDNIIMRVMDGLMSIPTFLLAIALLSLTGPGIGILIVAIAIPE
TPAVTRLVRSVVLSVRSRPYVEAALCGGARLPRVLWRHILPSTIPPLMVQSATVCASAIMTEAGLSFIGVGVPSEIPSWG
NMIANSRLFLAIAPLTIFAPGLCLAVTVLAVNLLGDGLRDMFDPRSKRRR

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1787054, Length=281, Percent_Identity=38.4341637010676, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1787760, Length=297, Percent_Identity=36.3636363636364, Blast_Score=177, Evalue=6e-46,
Organism=Escherichia coli, GI1789889, Length=236, Percent_Identity=38.135593220339, Blast_Score=154, Evalue=9e-39,
Organism=Escherichia coli, GI1789964, Length=219, Percent_Identity=42.0091324200913, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1787498, Length=260, Percent_Identity=32.6923076923077, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787549, Length=214, Percent_Identity=32.2429906542056, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1788505, Length=224, Percent_Identity=30.8035714285714, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4TQ_RHISN (Q53192)

Other databases:

- EMBL:   Z68203
- EMBL:   U00090
- RefSeq:   NP_444083.1
- ProteinModelPortal:   Q53192
- GeneID:   962464
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01420
- HOGENOM:   HBG729429
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 30911; Mature: 30779

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x9668f24)-; HASH(0xad82024)-; HASH(0x953daf4)-; HASH(0x953726c)-; HASH(0xc168040)-;

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTTSRASGSPRIQTHTVVRIAKRHPLVLLGGGILLLLILLALAAPLYSGDPLVMDPFK
CCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEECHHH
RLQQPSASMWFGTDNLGRDVFARTIYGARISLIVGLLSAVCAAVCGLLIGVIAGYSRTFD
HHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIIMRVMDGLMSIPTFLLAIALLSLTGPGIGILIVAIAIPETPAVTRLVRSVVLSVRSRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHCCCCCHHHHHHHHHHHHHHHCCC
YVEAALCGGARLPRVLWRHILPSTIPPLMVQSATVCASAIMTEAGLSFIGVGVPSEIPSW
CHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCH
GNMIANSRLFLAIAPLTIFAPGLCLAVTVLAVNLLGDGLRDMFDPRSKRRR
HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCH
>Mature Secondary Structure 
ALTTSRASGSPRIQTHTVVRIAKRHPLVLLGGGILLLLILLALAAPLYSGDPLVMDPFK
CCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEECHHH
RLQQPSASMWFGTDNLGRDVFARTIYGARISLIVGLLSAVCAAVCGLLIGVIAGYSRTFD
HHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIIMRVMDGLMSIPTFLLAIALLSLTGPGIGILIVAIAIPETPAVTRLVRSVVLSVRSRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHCCCCCHHHHHHHHHHHHHHHCCC
YVEAALCGGARLPRVLWRHILPSTIPPLMVQSATVCASAIMTEAGLSFIGVGVPSEIPSW
CHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCH
GNMIANSRLFLAIAPLTIFAPGLCLAVTVLAVNLLGDGLRDMFDPRSKRRR
HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424