Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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The map label for this gene is eutB
Identifier: 16519956
GI number: 16519956
Start: 182109
End: 183107
Strand: Reverse
Name: eutB
Synonym: NGR_a01490
Alternate gene names: 16519956
Gene position: 183107-182109 (Counterclockwise)
Preceding gene: 16519955
Following gene: 16519957
Centisome position: 34.15
GC content: 57.36
Gene sequence:
>999_bases GTGAATGAATTGTCGAACTTAAGTCTAGAATCGATCGAGCGAGCGCGTGAGCGGATCGAAGAGCACGTCTTCCGTACCCC TCTGACGACATCAAGGTCGCTAACCGAACTTACCGGAACTCAGGTCAGCCTCAAGCTCGAGCACTATCAGCGCACTGGTA GCTTTAAGCTGCGGGGTGCGACAAACGCAATTCTTCAACTCAGCCCGTCGGATCGGGCACGTGGGGTTATTGCGGCATCT ACGGGCAATCACGGACGGGCTCTTTCCTACGCCGCAAAAGCGGTCGGCTCTCGCGCCACCATCTGCATGTCGGATCTTGT TCCAGAAAACAAGGTTTCCGAGATCCGGAAGCTTGGCGCGACAGTTCGGATAGTGGGATCGTCACAAGACGATGCGCAAG TCGAAGTCGAGCGGCTCGTCGCGGAGGAAGGCCTCAGCATGATCCCGCCTTTCGATCACCCGCATATCATCGCCGGCCAG CGAACCGTCGGTCTTGAGATCGTTGAGGCGATGCCGGACGTCGCGATGGTACTGCTTCCACTGTCGGGTGGCGGCTTGGC TGCAGGCGTTGCAGCAGCGGTGAAGGCACTGCGGCCTCATGCGAGGATCATCGGTGTCACTATGGATCGAGGCGCCGCGA TGAAGGCCAGCATCGAAGCTGGGCATCCGGTACAAGTGAAGGAGTATCGGAGCTTGGCTGATTCTTTAGGTGGAGGAATC GGCATGGCCAACGCTTGGACCTTTCAAATGTGCAGAGCCCTTCTGGACGATGTTGTCCTCGTTAATGAAGGCGAAATAGC CGCGGGAATTAGACATGCTTATGAGCATGAGCGTCAGATACTCGAGGGCGCCGGCGCTGTCGGTATCGCAGCGCTTCTCT CCGGCAAGGTGGCTGCTCGCGGAGGTTCAGTAGGAGTCGTTTTGTCAGGTCAAAACATCGACATGGGCCTGCATCGGGAG GTCATTAACGGAGTTGTCAGAGCGACCGAGGAGGATTGA
Upstream 100 bases:
>100_bases CCCGACGACCGAACTTGCTGTGAAGTATTGTTTCGATTTGCTGCATGGGCAGTCTGCACGTTGATCGACTTGTATGCCAG GATGTTTGCCACTGTATTAG
Downstream 100 bases:
>100_bases TGCCTACAATGAAAATACTCACTGAGGGGGAGTTGAGGCAAATCGTGCCGCTCGACCTCGACGCGGTTAAGTGCACCGAA GACGCTTTCCGCGCACTCGC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MNELSNLSLESIERARERIEEHVFRTPLTTSRSLTELTGTQVSLKLEHYQRTGSFKLRGATNAILQLSPSDRARGVIAAS TGNHGRALSYAAKAVGSRATICMSDLVPENKVSEIRKLGATVRIVGSSQDDAQVEVERLVAEEGLSMIPPFDHPHIIAGQ RTVGLEIVEAMPDVAMVLLPLSGGGLAAGVAAAVKALRPHARIIGVTMDRGAAMKASIEAGHPVQVKEYRSLADSLGGGI GMANAWTFQMCRALLDDVVLVNEGEIAAGIRHAYEHERQILEGAGAVGIAALLSGKVAARGGSVGVVLSGQNIDMGLHRE VINGVVRATEED
Sequences:
>Translated_332_residues MNELSNLSLESIERARERIEEHVFRTPLTTSRSLTELTGTQVSLKLEHYQRTGSFKLRGATNAILQLSPSDRARGVIAAS TGNHGRALSYAAKAVGSRATICMSDLVPENKVSEIRKLGATVRIVGSSQDDAQVEVERLVAEEGLSMIPPFDHPHIIAGQ RTVGLEIVEAMPDVAMVLLPLSGGGLAAGVAAAVKALRPHARIIGVTMDRGAAMKASIEAGHPVQVKEYRSLADSLGGGI GMANAWTFQMCRALLDDVVLVNEGEIAAGIRHAYEHERQILEGAGAVGIAALLSGKVAARGGSVGVVLSGQNIDMGLHRE VINGVVRATEED >Mature_332_residues MNELSNLSLESIERARERIEEHVFRTPLTTSRSLTELTGTQVSLKLEHYQRTGSFKLRGATNAILQLSPSDRARGVIAAS TGNHGRALSYAAKAVGSRATICMSDLVPENKVSEIRKLGATVRIVGSSQDDAQVEVERLVAEEGLSMIPPFDHPHIIAGQ RTVGLEIVEAMPDVAMVLLPLSGGGLAAGVAAAVKALRPHARIIGVTMDRGAAMKASIEAGHPVQVKEYRSLADSLGGGI GMANAWTFQMCRALLDDVVLVNEGEIAAGIRHAYEHERQILEGAGAVGIAALLSGKVAARGGSVGVVLSGQNIDMGLHRE VINGVVRATEED
Specific function: Acts On Both Serine And Threonine, And Properly Considered As A Hydroxy Amino Acid Deaminase. [C]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family
Homologues:
Organism=Homo sapiens, GI11345492, Length=318, Percent_Identity=33.3333333333333, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI19923959, Length=302, Percent_Identity=30.794701986755, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI33469958, Length=152, Percent_Identity=34.8684210526316, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1789505, Length=260, Percent_Identity=36.1538461538462, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1790207, Length=294, Percent_Identity=34.0136054421769, Blast_Score=156, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71991565, Length=310, Percent_Identity=38.7096774193548, Blast_Score=168, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17537387, Length=311, Percent_Identity=38.9067524115756, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI17508781, Length=318, Percent_Identity=28.6163522012579, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6322631, Length=311, Percent_Identity=36.3344051446945, Blast_Score=179, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6320930, Length=315, Percent_Identity=34.9206349206349, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6319788, Length=267, Percent_Identity=27.3408239700375, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI21355833, Length=309, Percent_Identity=39.1585760517799, Blast_Score=147, Evalue=9e-36, Organism=Drosophila melanogaster, GI24645328, Length=213, Percent_Identity=39.4366197183099, Blast_Score=91, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4TJ_RHISN (P55664)
Other databases:
- EMBL: U00090 - RefSeq: NP_444076.1 - ProteinModelPortal: P55664 - SMR: P55664 - GeneID: 962446 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a01490 - HOGENOM: HBG714501 - ProtClustDB: PRK07476 - InterPro: IPR014333 - InterPro: IPR001926 - InterPro: IPR000634 - TIGRFAMs: TIGR02991
Pfam domain/function: PF00291 PALP; SSF53686 PyrdxlP-dep_enz_bsu
EC number: =4.3.1.19
Molecular weight: Translated: 35071; Mature: 35071
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELSNLSLESIERARERIEEHVFRTPLTTSRSLTELTGTQVSLKLEHYQRTGSFKLRGA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEEHHHCCCCEEEECC TNAILQLSPSDRARGVIAASTGNHGRALSYAAKAVGSRATICMSDLVPENKVSEIRKLGA CCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHCCC TVRIVGSSQDDAQVEVERLVAEEGLSMIPPFDHPHIIAGQRTVGLEIVEAMPDVAMVLLP EEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEEEEE LSGGGLAAGVAAAVKALRPHARIIGVTMDRGAAMKASIEAGHPVQVKEYRSLADSLGGGI CCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCEEHHHHHHHHHHHCCCC GMANAWTFQMCRALLDDVVLVNEGEIAAGIRHAYEHERQILEGAGAVGIAALLSGKVAAR CCCHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEC GGSVGVVLSGQNIDMGLHREVINGVVRATEED CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNELSNLSLESIERARERIEEHVFRTPLTTSRSLTELTGTQVSLKLEHYQRTGSFKLRGA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEEHHHCCCCEEEECC TNAILQLSPSDRARGVIAASTGNHGRALSYAAKAVGSRATICMSDLVPENKVSEIRKLGA CCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHCCC TVRIVGSSQDDAQVEVERLVAEEGLSMIPPFDHPHIIAGQRTVGLEIVEAMPDVAMVLLP EEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEEEEE LSGGGLAAGVAAAVKALRPHARIIGVTMDRGAAMKASIEAGHPVQVKEYRSLADSLGGGI CCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCEEHHHHHHHHHHHCCCC GMANAWTFQMCRALLDDVVLVNEGEIAAGIRHAYEHERQILEGAGAVGIAALLSGKVAAR CCCHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEC GGSVGVVLSGQNIDMGLHREVINGVVRATEED CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424