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Identifier: 16519951

GI number: 16519951

Start: 187038

End: 187940

Strand: Reverse

Name: Not Available

Synonym: NGR_a01540

Alternate gene names: 16519951

Gene position: 187940-187038 (Counterclockwise)

Preceding gene: 16519950

Following gene: 16519952

Centisome position: 35.05

GC content: 56.37

Gene sequence:

>903_bases
ATGACACATCTAAAGATCTCCAAAACCGCACCTGCTGTTGCTCGCTTCCTTCCTGCCGGCCGCATTGCGAGTGTGGCTGC
GGCCCTAAGTTTGTTCTTGTCAGCGCAGCTTGCAGGTGCCGTGACGCTCGAGGAAGTGAAAGCGCGCGGGTACATCACTA
TCGCAATAGCGAATGAGATGCCCGGCAGCTATACCGACCCGAACGGCGAGGTGAAGGGCTCTGAGGCCGATGTTGCGCGG
CGCGTCCTCGAGAAATTGGGGATCAAACCAGAGAACATTCAATGGGTCGTCACGACTTTTGGGTCGTTAATTCCCGGGCT
GCAAGCCAACCGCTTTGACATGACCGCCGCCGGGATGGCCATTCGACCAGAGCGTTGCGAGAAGGTTATCTACAGTGAGC
CGAATTCCAGTTATGGCGAGGGAATGCTGGTGATCAAAGGCAACCCGCGAAACTTTCACTCCTATGAAGACGTGGCTCAA
CAGGGGAAGATTGCGATCATGGCGGGCGCCGATCAGTTGCGAATGATGCAGGCATTGGGCGTCCCAAACGAGAACATAAT
AACGATCGCAGCAAATGCCGACGCTATTTCAGCGGTCGCCACCGGGCGCGCCGACGCCTATGCAGCGGCGGCCTCAACTG
CAGCCGACCTTGCCAAAAAGAGCGACAAAGTCGAACTCGCCACGCCTTTCCAAGATCCGGTCATCGATGGCAAAATTCAG
CGCAGTTGGGGTGCCTTCAGCTTCAACAAGGAATCCGCCGACCTGCGTGACAAGTTCAACGAGGCGCTCCTGGAGTTCCG
CAAGACGGATGAGTTCAAGCAGCTCTTGCTCGGGTACGGTTATTTGCCAGAGTCGATCGCGGCGATACCCGACAAGACGA
CCAAAGAGTTATGCTCGAATTGA

Upstream 100 bases:

>100_bases
TTTCCTGCGGCCGAGGCAGAAAAATGCCGAATCCTGGCGGCCGAGTGCATTGATCATCCCCAGCGGCGGCTTCGTAAGCC
CGCTCAAAAAGGGGAACCAA

Downstream 100 bases:

>100_bases
GGCAGCAAGAACGATTGAACGTCGACCGAAACATCCGTCGACGTCTCTCCGGTGCGAACGCGCCGCGTCTACCTTCCACT
TAAAGGCGAGCTATCAATGG

Product: amino acid ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTHLKISKTAPAVARFLPAGRIASVAAALSLFLSAQLAGAVTLEEVKARGYITIAIANEMPGSYTDPNGEVKGSEADVAR
RVLEKLGIKPENIQWVVTTFGSLIPGLQANRFDMTAAGMAIRPERCEKVIYSEPNSSYGEGMLVIKGNPRNFHSYEDVAQ
QGKIAIMAGADQLRMMQALGVPNENIITIAANADAISAVATGRADAYAAAASTAADLAKKSDKVELATPFQDPVIDGKIQ
RSWGAFSFNKESADLRDKFNEALLEFRKTDEFKQLLLGYGYLPESIAAIPDKTTKELCSN

Sequences:

>Translated_300_residues
MTHLKISKTAPAVARFLPAGRIASVAAALSLFLSAQLAGAVTLEEVKARGYITIAIANEMPGSYTDPNGEVKGSEADVAR
RVLEKLGIKPENIQWVVTTFGSLIPGLQANRFDMTAAGMAIRPERCEKVIYSEPNSSYGEGMLVIKGNPRNFHSYEDVAQ
QGKIAIMAGADQLRMMQALGVPNENIITIAANADAISAVATGRADAYAAAASTAADLAKKSDKVELATPFQDPVIDGKIQ
RSWGAFSFNKESADLRDKFNEALLEFRKTDEFKQLLLGYGYLPESIAAIPDKTTKELCSN
>Mature_299_residues
THLKISKTAPAVARFLPAGRIASVAAALSLFLSAQLAGAVTLEEVKARGYITIAIANEMPGSYTDPNGEVKGSEADVARR
VLEKLGIKPENIQWVVTTFGSLIPGLQANRFDMTAAGMAIRPERCEKVIYSEPNSSYGEGMLVIKGNPRNFHSYEDVAQQ
GKIAIMAGADQLRMMQALGVPNENIITIAANADAISAVATGRADAYAAAASTAADLAKKSDKVELATPFQDPVIDGKIQR
SWGAFSFNKESADLRDKFNEALLEFRKTDEFKQLLLGYGYLPESIAAIPDKTTKELCSN

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family

Homologues:

None

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): Y4TE_RHISN (P55659)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444071.1
- ProteinModelPortal:   P55659
- SMR:   P55659
- GeneID:   962448
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01540
- HOGENOM:   HBG570083
- ProtClustDB:   CLSK881657
- InterPro:   IPR014337
- InterPro:   IPR001638
- SMART:   SM00062
- TIGRFAMs:   TIGR02995

Pfam domain/function: PF00497 SBP_bac_3

EC number: NA

Molecular weight: Translated: 32217; Mature: 32086

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHLKISKTAPAVARFLPAGRIASVAAALSLFLSAQLAGAVTLEEVKARGYITIAIANEM
CCCEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECCC
PGSYTDPNGEVKGSEADVARRVLEKLGIKPENIQWVVTTFGSLIPGLQANRFDMTAAGMA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCEEHHCCCE
IRPERCEKVIYSEPNSSYGEGMLVIKGNPRNFHSYEDVAQQGKIAIMAGADQLRMMQALG
ECHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHHC
VPNENIITIAANADAISAVATGRADAYAAAASTAADLAKKSDKVELATPFQDPVIDGKIQ
CCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEE
RSWGAFSFNKESADLRDKFNEALLEFRKTDEFKQLLLGYGYLPESIAAIPDKTTKELCSN
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
THLKISKTAPAVARFLPAGRIASVAAALSLFLSAQLAGAVTLEEVKARGYITIAIANEM
CCEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECCC
PGSYTDPNGEVKGSEADVARRVLEKLGIKPENIQWVVTTFGSLIPGLQANRFDMTAAGMA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCEEHHCCCE
IRPERCEKVIYSEPNSSYGEGMLVIKGNPRNFHSYEDVAQQGKIAIMAGADQLRMMQALG
ECHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHHC
VPNENIITIAANADAISAVATGRADAYAAAASTAADLAKKSDKVELATPFQDPVIDGKIQ
CCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEE
RSWGAFSFNKESADLRDKFNEALLEFRKTDEFKQLLLGYGYLPESIAAIPDKTTKELCSN
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424