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Identifier: 16519905

GI number: 16519905

Start: 264289

End: 265026

Strand: Reverse

Name: Not Available

Synonym: NGR_a02000

Alternate gene names: 16519905

Gene position: 265026-264289 (Counterclockwise)

Preceding gene: 16519896

Following gene: 16519906

Centisome position: 49.43

GC content: 60.3

Gene sequence:

>738_bases
ATGCTTGCACATCCCACTCTTGATAAATTGAACACCATGGGCCTGACCGGCATGGCCAAGGCGTTCAGTGAACTGATCAG
CAACGGCGAAAGCGAGCAACTCTCCCATGCCGAATGGCTCGGGCTGCTGCTCGAGCGAGAATGGAGCTGGCGCTACGATC
GCAAGCTTGCCGCACGTCTCAGGTTCGCCAAGCTGCGCCACCAGGCCGTGCCGGAGGATGTCGATTATAGAAGTGAACGC
GGTCTCGATCGCGCCCTGTTCATGAAGCTGATCGGCGGCGACTGGATCGATGCCCACGACAATCTTGCCATTTGCGGGCC
GTCCGGCGTCGGCAAAAGTTGGTTGGCCTGCGCACTCGGGCACAAAGCGTGTCGTGATGATCGCTCGGTTCTCTACCAGC
GCGTTCCGCGGCTGTTTGCCAACCTTGCTCTGGCTCGCGGCGATGGCCGTTATGCAAGGCTGCAGCGAACCCTCGGGCAC
GTGCAGCTCCTGATCCTCGATGACTGGGGCCTGGAGCCGCTCAACGAGCAGGCGCGCCACGATCTTCTGGAGATCCTCGA
AGATCGTTACGGACGCCGCTCGACGATCATTACCAGCCAGCTTCCGGTATCAGCCTGGCACGAGATCATCGGCAATCCAA
CCTATGCCGATGCCATCCTCGACCGCCTCGTTCACAATGCCCACCGCATCGACCTATCCGGCGAAAGCTTACGGCGAAAC
CAGCGCCGGAAATCTTGA

Upstream 100 bases:

>100_bases
ATCTCGATCGGTCGCCAGCGTCAGCCGGCACAGCCTCGCCTGAACCCATCCACCACTCCAACATCCGCGGTCCACGCTAT
TACCACTGAGGAGAAGCCAT

Downstream 100 bases:

>100_bases
CTCGCGACCACGATCAACTGACAACAATGACAGCCAGCAGGACCCCAGCCTCAAGGGGGCGAGATCATCCCGGAATCCGG
GGGCGCAATCATCTCGGAAC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLAHPTLDKLNTMGLTGMAKAFSELISNGESEQLSHAEWLGLLLEREWSWRYDRKLAARLRFAKLRHQAVPEDVDYRSER
GLDRALFMKLIGGDWIDAHDNLAICGPSGVGKSWLACALGHKACRDDRSVLYQRVPRLFANLALARGDGRYARLQRTLGH
VQLLILDDWGLEPLNEQARHDLLEILEDRYGRRSTIITSQLPVSAWHEIIGNPTYADAILDRLVHNAHRIDLSGESLRRN
QRRKS

Sequences:

>Translated_245_residues
MLAHPTLDKLNTMGLTGMAKAFSELISNGESEQLSHAEWLGLLLEREWSWRYDRKLAARLRFAKLRHQAVPEDVDYRSER
GLDRALFMKLIGGDWIDAHDNLAICGPSGVGKSWLACALGHKACRDDRSVLYQRVPRLFANLALARGDGRYARLQRTLGH
VQLLILDDWGLEPLNEQARHDLLEILEDRYGRRSTIITSQLPVSAWHEIIGNPTYADAILDRLVHNAHRIDLSGESLRRN
QRRKS
>Mature_245_residues
MLAHPTLDKLNTMGLTGMAKAFSELISNGESEQLSHAEWLGLLLEREWSWRYDRKLAARLRFAKLRHQAVPEDVDYRSER
GLDRALFMKLIGGDWIDAHDNLAICGPSGVGKSWLACALGHKACRDDRSVLYQRVPRLFANLALARGDGRYARLQRTLGH
VQLLILDDWGLEPLNEQARHDLLEILEDRYGRRSTIITSQLPVSAWHEIIGNPTYADAILDRLVHNAHRIDLSGESLRRN
QRRKS

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4PL_RHISN (P55617)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444025.1
- ProteinModelPortal:   P55617
- SMR:   P55617
- GeneID:   962583
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02000
- HOGENOM:   HBG695266
- ProtClustDB:   CLSK807603
- InterPro:   IPR003593
- InterPro:   IPR002611
- InterPro:   IPR013690
- SMART:   SM00382

Pfam domain/function: PF01695 IstB; PF08483 IstB_N

EC number: NA

Molecular weight: Translated: 27961; Mature: 27961

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00464 RIBOSOMAL_L22

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAHPTLDKLNTMGLTGMAKAFSELISNGESEQLSHAEWLGLLLEREWSWRYDRKLAARL
CCCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RFAKLRHQAVPEDVDYRSERGLDRALFMKLIGGDWIDAHDNLAICGPSGVGKSWLACALG
HHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHH
HKACRDDRSVLYQRVPRLFANLALARGDGRYARLQRTLGHVQLLILDDWGLEPLNEQARH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCCCCHHHHH
DLLEILEDRYGRRSTIITSQLPVSAWHEIIGNPTYADAILDRLVHNAHRIDLSGESLRRN
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
QRRKS
HHCCC
>Mature Secondary Structure
MLAHPTLDKLNTMGLTGMAKAFSELISNGESEQLSHAEWLGLLLEREWSWRYDRKLAARL
CCCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RFAKLRHQAVPEDVDYRSERGLDRALFMKLIGGDWIDAHDNLAICGPSGVGKSWLACALG
HHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHH
HKACRDDRSVLYQRVPRLFANLALARGDGRYARLQRTLGHVQLLILDDWGLEPLNEQARH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCCCCHHHHH
DLLEILEDRYGRRSTIITSQLPVSAWHEIIGNPTYADAILDRLVHNAHRIDLSGESLRRN
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
QRRKS
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424