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Identifier: 16519883

GI number: 16519883

Start: 289469

End: 289918

Strand: Direct

Name: Not Available

Synonym: NGR_a02220

Alternate gene names: NA

Gene position: 289469-289918 (Clockwise)

Preceding gene: 16519884

Following gene: 16519882

Centisome position: 53.99

GC content: 62.22

Gene sequence:

>450_bases
ATGACCAAAGAAAGCAAGCCCGATCGCCTGCGCCAGATGGGCGCTCTGAACCCCAAGCCCGAGAGCGTCCGCGCCCCCTG
GTTCCGGGAAGCAGGTTTCTTTGATCCGCTCGATCTCGTGCAAGTGAAGTATGAGATGCTTCGGCACGCCCGCGAAGACG
GCACCAACAAAGCGGATGCGGCCGCGCTTTTTGGGCTTTCTCGGCAGACCTACTATCAAGCGGAGGCCGCGTTCGAGCGC
GATGGCATGTCCGGCCTCTTGCCGCGCACCCGTGGGCCGAAGTCAGCCCACAAGCTTACTGGCGAGGTCATGCGTCTCGT
CGAGGAGCATCTCGACGCGAACGGCCAACTGCAGGCCCGTTCTCTGGCGGACCTGGTGCATTCGAGACTGGGCATCAGCG
TCCATCCTCGCAGCATCGAACGCGCGGTGGCGCGGAAAAAAAAACGATGA

Upstream 100 bases:

>100_bases
TGAAGCCCTGTGATGCATGCGTATCGGCGATATTAGCGATATAATTTAATTGACGTGCGAGCCAAGTGCGGCATAATTTA
TCTTACACAAGGAGGCTCCC

Downstream 100 bases:

>100_bases
AGAGCCGACCCACGCAATCGCCATGTCAGAGAACGGCAAGGATGTTTACGAAGCGCTCCGCGCCGATGTTATTTGCGGCA
CGGCTTGCGCGAGGCGCATG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTKESKPDRLRQMGALNPKPESVRAPWFREAGFFDPLDLVQVKYEMLRHAREDGTNKADAAALFGLSRQTYYQAEAAFER
DGMSGLLPRTRGPKSAHKLTGEVMRLVEEHLDANGQLQARSLADLVHSRLGISVHPRSIERAVARKKKR

Sequences:

>Translated_149_residues
MTKESKPDRLRQMGALNPKPESVRAPWFREAGFFDPLDLVQVKYEMLRHAREDGTNKADAAALFGLSRQTYYQAEAAFER
DGMSGLLPRTRGPKSAHKLTGEVMRLVEEHLDANGQLQARSLADLVHSRLGISVHPRSIERAVARKKKR
>Mature_148_residues
TKESKPDRLRQMGALNPKPESVRAPWFREAGFFDPLDLVQVKYEMLRHAREDGTNKADAAALFGLSRQTYYQAEAAFERD
GMSGLLPRTRGPKSAHKLTGEVMRLVEEHLDANGQLQARSLADLVHSRLGISVHPRSIERAVARKKKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4OM_RHISN (P55598)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444003.1
- GeneID:   962386
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02220
- HOGENOM:   HBG295175
- ProtClustDB:   CLSK864426
- InterPro:   IPR009057

Pfam domain/function: SSF46689 Homeodomain_like

EC number: NA

Molecular weight: Translated: 16836; Mature: 16704

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKESKPDRLRQMGALNPKPESVRAPWFREAGFFDPLDLVQVKYEMLRHAREDGTNKADA
CCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
AALFGLSRQTYYQAEAAFERDGMSGLLPRTRGPKSAHKLTGEVMRLVEEHLDANGQLQAR
HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
SLADLVHSRLGISVHPRSIERAVARKKKR
HHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKESKPDRLRQMGALNPKPESVRAPWFREAGFFDPLDLVQVKYEMLRHAREDGTNKADA
CCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
AALFGLSRQTYYQAEAAFERDGMSGLLPRTRGPKSAHKLTGEVMRLVEEHLDANGQLQAR
HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
SLADLVHSRLGISVHPRSIERAVARKKKR
HHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424