Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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Identifier: 16519881
GI number: 16519881
Start: 293949
End: 294158
Strand: Direct
Name: Not Available
Synonym: NGR_a02240
Alternate gene names: NA
Gene position: 293949-294158 (Clockwise)
Preceding gene: 16519882
Following gene: 16519880
Centisome position: 54.82
GC content: 60.0
Gene sequence:
>210_bases ATGACTATGATGAAGGCGATCTGGCCAGAACCTTCGGACCCGGAAAGCATGATGGAAGCCGCGATTGACCTGTTCGGCGA CGAGGCAGCGACTGCCGTGGCGCATTGCGGTCTTGAGGCCTGGACCGACGGGCGAGCAGACGATTTCGCATTCTGGGTCG ACATTTTCCGCAGTCTGACGGGGATGCCTTCGGCCGGCGCCGGAAATTAA
Upstream 100 bases:
>100_bases TGCGTTTTCTGCGGCCTGTGCAACGCGTGTATAAACGATCGTTTGCGCAACGCTCAAATGCGCGTAGTATCCTCACGCCC GAGAAGCAGCGATTAGGTGT
Downstream 100 bases:
>100_bases GCGGACTGGTCGGTGCGGCGCCTGTCCGTCGATAGCCATTGATTTTGCGCGATGCAGGCTGCTTCGGCCTCTTGCGTTGC AGCGCCCGCGGCATTATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MTMMKAIWPEPSDPESMMEAAIDLFGDEAATAVAHCGLEAWTDGRADDFAFWVDIFRSLTGMPSAGAGN
Sequences:
>Translated_69_residues MTMMKAIWPEPSDPESMMEAAIDLFGDEAATAVAHCGLEAWTDGRADDFAFWVDIFRSLTGMPSAGAGN >Mature_68_residues TMMKAIWPEPSDPESMMEAAIDLFGDEAATAVAHCGLEAWTDGRADDFAFWVDIFRSLTGMPSAGAGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4OE_RHISN (P55590)
Other databases:
- EMBL: U00090 - RefSeq: NP_444001.1 - GeneID: 962393 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a02240
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7412; Mature: 7281
Theoretical pI: Translated: 3.75; Mature: 3.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 8.7 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMMKAIWPEPSDPESMMEAAIDLFGDEAATAVAHCGLEAWTDGRADDFAFWVDIFRSLT CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHC GMPSAGAGN CCCCCCCCC >Mature Secondary Structure TMMKAIWPEPSDPESMMEAAIDLFGDEAATAVAHCGLEAWTDGRADDFAFWVDIFRSLT CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHC GMPSAGAGN CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424