Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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Identifier: 16519877

GI number: 16519877

Start: 296814

End: 298595

Strand: Direct

Name: Not Available

Synonym: NGR_a02280

Alternate gene names: 16519877

Gene position: 296814-298595 (Clockwise)

Preceding gene: 16519880

Following gene: 16519876

Centisome position: 55.36

GC content: 59.82

Gene sequence:

>1782_bases
GTGAACGTTCTTAAGCGCGGCTCGGATCAGGACAATTGGTGGCAGGCCTATCCTGGCTTGTATGCCCGGGAGTTGGCGGC
CTATGAGGGGCACGGCGCCTCTCACCGGCCGTTAATCCAACAGGACGGCACCTTGATCCTCGAGGTCCTTTGGCCGATGG
ACAGTGCCGGGTCCATCCGACTTAATGTCGGCTACTCGCCGCTGCATCCGTTCTGCCGACCCTCGATATCCGCGCCTGAA
CTGCAACTCGAGCGGCATCAGAATCCCTTTACGAGGGATTTGTGCCTGCTGACGCAGGACTCTGCCCAGTGGTACCCCCA
TCAAATGGTCGCGGACTTCATAGCCGAGCGGTTATCGCAGGTCCTGCAAGTCATGACACTGCGGCGGAACGAGCAGTGGA
GTGAGGCAGCCAGCCTCGAAGAACAAGCTCCCGACCCTGTAACGCCATATCATATGCATGTTGCCGAGGAGTATTCGGCG
GTCTTTTTTGATGGGCAGCAGACCGTTCCAAATGCCCCCCTCGGAACCGCAGTTTTCCTGCTCCAGGACCGCCTGGAGCG
AGGAAGGTCTCCACCGTTTCAAGCCATTCTGAGCAAAGTGGAGCCATTGAGCGGCACCTGGATGGCGAAGCCCTTCGATC
TCCCGAAACGGGCCGGCCCATGGAAAAACGTCATCGGGCGCTGGATACGCCTGGAGCCGCCATTCCCCGAGGCCCCGGAG
GAGATTTTGGCGGCGGCCGAGAAGGCGATAGAGCGACAATCGGCCCTCTTCCCCGCTCACCTGAAGAAGCTCGGATCAAT
TGCCGACGACGATCTATCGATTACCGCCGTGGTTTTTCAGGAGGAGCTTTCCTACGGCCCTGATAACAAGGGCAACGGTT
GGTTCTTTCTCGTCAGTCGGCGCGTGCCTGGCAGCCGCCGGCGACAGGTTTCCTTGGTGCGCGGATACCGTCTGTCGAGC
GATATGCTCTCGCGACTGCCTGTCGCGAGTGCTTTGAAAAGCAAAAAGGTTGTTCTCGTAGGGTGCGGCGCCATCGGCAG
TTTCGCTGCAGTCGAGCTTGCGCGCTCAGGCGTCGGTCAGCTGACGATCATCGATTTCGATCTCGTCGAGCCTGGCAACA
CGGTCAGATGGGCGCTGGGTCGTTCGGTGTGGGGCCTGCCAAAGACAACCGCGCTGCACGATTTCCTCTATCACAACTAC
CCTTGGACAAATGTCGGGCGTGGACACGCTAAAGTGGGCTCAGCAATCTCGAATGTGGACGACGTCCGCAAACTCGAGGG
GAATCCCATGCGTTGGCTTCGAGCATTGATCGAGGACGCCGACATTGTGGTAGACACTTCGGCCTCGACCGAGTGTCAGG
GCGCCTTGGCCTACATGTGCCGTAGCATAGGAAAGCGGTACGTACTCGGCCACGCAACCGAAGGCGCGGCCGGAGGCGTT
GTGGCGAGATTCAAACCGGGAGCCCCGGGTTGTTATGTCTGCTTGCAGCAGCATTGGTCCGGCAAGACGCTCCCGCTCCC
AACTATTGACAGCTCGGGCACGATAGTTCCGACCGGCTGCAACGCGCCAACGTTCACCGGAGGCGCCTTTGACCTGCAGG
AAGTGTCGATGGAAGTTGTACGCAGCACGATCGGACTGCTCGCCCCGGACGTGTACGATTCGGGTGACTGGCAGCTTTCC
ATTCTTGATCTGACCGAAAATGGCCGCCGCATTCTCCCGCGGTGGAAAGCCGAGACGATCGCACCACATTCGAGCTGCAG
CTGCGGAGCGTCACAGGGATGA

Upstream 100 bases:

>100_bases
CCGACGTCCCGAAGGGGCCGCCCAGCCATACTCCGGGTCGCCCCGATGGCCCGCCAGTGCCCTCTCACCCCCCGTCCCAC
CGGCCGGTCGGCTGACGGAG

Downstream 100 bases:

>100_bases
CAATTTGGTTGGGGCGCGACGCAGCTCAAGTAATAATCGAACAGGCCAACATATTCTTTCCGCTCGAGACCGGCGGTGTT
CTCCTCGGTTGGAGAGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MNVLKRGSDQDNWWQAYPGLYARELAAYEGHGASHRPLIQQDGTLILEVLWPMDSAGSIRLNVGYSPLHPFCRPSISAPE
LQLERHQNPFTRDLCLLTQDSAQWYPHQMVADFIAERLSQVLQVMTLRRNEQWSEAASLEEQAPDPVTPYHMHVAEEYSA
VFFDGQQTVPNAPLGTAVFLLQDRLERGRSPPFQAILSKVEPLSGTWMAKPFDLPKRAGPWKNVIGRWIRLEPPFPEAPE
EILAAAEKAIERQSALFPAHLKKLGSIADDDLSITAVVFQEELSYGPDNKGNGWFFLVSRRVPGSRRRQVSLVRGYRLSS
DMLSRLPVASALKSKKVVLVGCGAIGSFAAVELARSGVGQLTIIDFDLVEPGNTVRWALGRSVWGLPKTTALHDFLYHNY
PWTNVGRGHAKVGSAISNVDDVRKLEGNPMRWLRALIEDADIVVDTSASTECQGALAYMCRSIGKRYVLGHATEGAAGGV
VARFKPGAPGCYVCLQQHWSGKTLPLPTIDSSGTIVPTGCNAPTFTGGAFDLQEVSMEVVRSTIGLLAPDVYDSGDWQLS
ILDLTENGRRILPRWKAETIAPHSSCSCGASQG

Sequences:

>Translated_593_residues
MNVLKRGSDQDNWWQAYPGLYARELAAYEGHGASHRPLIQQDGTLILEVLWPMDSAGSIRLNVGYSPLHPFCRPSISAPE
LQLERHQNPFTRDLCLLTQDSAQWYPHQMVADFIAERLSQVLQVMTLRRNEQWSEAASLEEQAPDPVTPYHMHVAEEYSA
VFFDGQQTVPNAPLGTAVFLLQDRLERGRSPPFQAILSKVEPLSGTWMAKPFDLPKRAGPWKNVIGRWIRLEPPFPEAPE
EILAAAEKAIERQSALFPAHLKKLGSIADDDLSITAVVFQEELSYGPDNKGNGWFFLVSRRVPGSRRRQVSLVRGYRLSS
DMLSRLPVASALKSKKVVLVGCGAIGSFAAVELARSGVGQLTIIDFDLVEPGNTVRWALGRSVWGLPKTTALHDFLYHNY
PWTNVGRGHAKVGSAISNVDDVRKLEGNPMRWLRALIEDADIVVDTSASTECQGALAYMCRSIGKRYVLGHATEGAAGGV
VARFKPGAPGCYVCLQQHWSGKTLPLPTIDSSGTIVPTGCNAPTFTGGAFDLQEVSMEVVRSTIGLLAPDVYDSGDWQLS
ILDLTENGRRILPRWKAETIAPHSSCSCGASQG
>Mature_593_residues
MNVLKRGSDQDNWWQAYPGLYARELAAYEGHGASHRPLIQQDGTLILEVLWPMDSAGSIRLNVGYSPLHPFCRPSISAPE
LQLERHQNPFTRDLCLLTQDSAQWYPHQMVADFIAERLSQVLQVMTLRRNEQWSEAASLEEQAPDPVTPYHMHVAEEYSA
VFFDGQQTVPNAPLGTAVFLLQDRLERGRSPPFQAILSKVEPLSGTWMAKPFDLPKRAGPWKNVIGRWIRLEPPFPEAPE
EILAAAEKAIERQSALFPAHLKKLGSIADDDLSITAVVFQEELSYGPDNKGNGWFFLVSRRVPGSRRRQVSLVRGYRLSS
DMLSRLPVASALKSKKVVLVGCGAIGSFAAVELARSGVGQLTIIDFDLVEPGNTVRWALGRSVWGLPKTTALHDFLYHNY
PWTNVGRGHAKVGSAISNVDDVRKLEGNPMRWLRALIEDADIVVDTSASTECQGALAYMCRSIGKRYVLGHATEGAAGGV
VARFKPGAPGCYVCLQQHWSGKTLPLPTIDSSGTIVPTGCNAPTFTGGAFDLQEVSMEVVRSTIGLLAPDVYDSGDWQLS
ILDLTENGRRILPRWKAETIAPHSSCSCGASQG

Specific function: Involved In The Biosynthesis Of A Demolybdo Cofactor (Molybdopterin), Necessary For Molybdoenzymes. Plays A Role In The Activation Of The Small Subunit Of The Molybdopterin Converting Factor (Moad). [C]

COG id: COG0476

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787048, Length=243, Percent_Identity=28.3950617283951, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4OA_RHISN (P55586)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443997.1
- ProteinModelPortal:   P55586
- GeneID:   962203
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02280
- ProtClustDB:   CLSK563539
- GO:   GO:0005488
- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594
- Gene3D:   G3DSA:3.40.50.720

Pfam domain/function: PF00899 ThiF; SSF69572 MoeB

EC number: NA

Molecular weight: Translated: 65217; Mature: 65217

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLKRGSDQDNWWQAYPGLYARELAAYEGHGASHRPLIQQDGTLILEVLWPMDSAGSIR
CCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEECCCCCCCEEE
LNVGYSPLHPFCRPSISAPELQLERHQNPFTRDLCLLTQDSAQWYPHQMVADFIAERLSQ
EECCCCCCCHHHCCCCCCCCHHHHHCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHH
VLQVMTLRRNEQWSEAASLEEQAPDPVTPYHMHVAEEYSAVFFDGQQTVPNAPLGTAVFL
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEHHHHCCEEEECCCCCCCCCCCHHHHHH
LQDRLERGRSPPFQAILSKVEPLSGTWMAKPFDLPKRAGPWKNVIGRWIRLEPPFPEAPE
HHHHHHHCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHCCEEECCCCCCCCHH
EILAAAEKAIERQSALFPAHLKKLGSIADDDLSITAVVFQEELSYGPDNKGNGWFFLVSR
HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEEEHHHCCCCCCCCCEEEEEEEE
RVPGSRRRQVSLVRGYRLSSDMLSRLPVASALKSKKVVLVGCGAIGSFAAVELARSGVGQ
CCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCE
LTIIDFDLVEPGNTVRWALGRSVWGLPKTTALHDFLYHNYPWTNVGRGHAKVGSAISNVD
EEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
DVRKLEGNPMRWLRALIEDADIVVDTSASTECQGALAYMCRSIGKRYVLGHATEGAAGGV
HHHHHCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCE
VARFKPGAPGCYVCLQQHWSGKTLPLPTIDSSGTIVPTGCNAPTFTGGAFDLQEVSMEVV
EEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHH
RSTIGLLAPDVYDSGDWQLSILDLTENGRRILPRWKAETIAPHSSCSCGASQG
HHHHHHHCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNVLKRGSDQDNWWQAYPGLYARELAAYEGHGASHRPLIQQDGTLILEVLWPMDSAGSIR
CCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEECCCCCCCEEE
LNVGYSPLHPFCRPSISAPELQLERHQNPFTRDLCLLTQDSAQWYPHQMVADFIAERLSQ
EECCCCCCCHHHCCCCCCCCHHHHHCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHH
VLQVMTLRRNEQWSEAASLEEQAPDPVTPYHMHVAEEYSAVFFDGQQTVPNAPLGTAVFL
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEHHHHCCEEEECCCCCCCCCCCHHHHHH
LQDRLERGRSPPFQAILSKVEPLSGTWMAKPFDLPKRAGPWKNVIGRWIRLEPPFPEAPE
HHHHHHHCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHCCEEECCCCCCCCHH
EILAAAEKAIERQSALFPAHLKKLGSIADDDLSITAVVFQEELSYGPDNKGNGWFFLVSR
HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEEEHHHCCCCCCCCCEEEEEEEE
RVPGSRRRQVSLVRGYRLSSDMLSRLPVASALKSKKVVLVGCGAIGSFAAVELARSGVGQ
CCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCE
LTIIDFDLVEPGNTVRWALGRSVWGLPKTTALHDFLYHNYPWTNVGRGHAKVGSAISNVD
EEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
DVRKLEGNPMRWLRALIEDADIVVDTSASTECQGALAYMCRSIGKRYVLGHATEGAAGGV
HHHHHCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCE
VARFKPGAPGCYVCLQQHWSGKTLPLPTIDSSGTIVPTGCNAPTFTGGAFDLQEVSMEVV
EEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHH
RSTIGLLAPDVYDSGDWQLSILDLTENGRRILPRWKAETIAPHSSCSCGASQG
HHHHHHHCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424