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Identifier: 16519875

GI number: 16519875

Start: 301113

End: 302183

Strand: Direct

Name: Not Available

Synonym: NGR_a02300

Alternate gene names: 16519875

Gene position: 301113-302183 (Clockwise)

Preceding gene: 16519876

Following gene: 16519874

Centisome position: 56.16

GC content: 55.93

Gene sequence:

>1071_bases
ATGCAAGAGATAACCCCTATAACTTTGAATGCGCCGCTCGTACTCCTAACTGGAGCTGCCGGCTGGTTGGGCGGGCGGGT
GGCGGCCGCGTTGACGACGGGCCTGCCGGATGCAGGACTTCTCGCAAACGGAAGCTTCCGGGTAAGGGCCCTCGTGCCTA
AGGGAGAAGACATATCTGAGTTGCGCAAACAGGGCATGGAAATCGCGACAGGTGACCTTCGGGAGATGCAGTCCGTCCGC
GCGTTCGTCGCCGGCGCCGAAGGCGCCGTTCTCATTCACATGGCAGGTATCATTCATCCCAAAAATGTTGCCCAGTTTGA
AGCAATCAACACACAGGGCACGATCAACCTCGTTACTGCAGCGCAAAAGGCAGGTGTGCGGCGCGCTGTCGTCATGTCGT
CGAATTCGCCGGTCGGCTTCAATCCTCACTCGGACCACAGATTCACGGAGGAAAGCCCCTATGATCCCCATGCGGGATAC
GGCCGCTCCAAGATGCTGATGGAACGGGCACTGCGTGCGGAAGTGGCTGCTGGCAGCACTATGGAGATTGTCATCGTGCG
CGCGCCCTGGTTTTACGGTCCCAATCAGCCTTCAAGGCAAACGCTTTTTTTCAAGATGGTCAAAGAAGGCAAGTTTCCCA
TTATTGGATCAGGGCGGAACCGCCGATCCATGGGTTACACTGACAACCTGGCTCAGGGCATTCTTCTGGCCGCAGTTCAC
GAGCGGGCTGCGGGAGATATTTTCTGGCTTGCAGACGAGACGCCCTACACCATGAACGAAATCATTGAAGTCGTTGGAAT
GGTCCTGCACGAAGATTTCGGCATGACGGTAAAGCCCAACCCTTTCCGTCTGCCGGACATCGTAGGCGGCGCCGCAACGA
TACTTGATGCTACCCTCCAATATGCCGGGATCTATCACCAGAAGATCCATGTGCTGTCGGAAATGAACAAGACAATTGCC
TGCGATATCACCAAAGCCAGAAAAGTGCTCGGATACGCCCCGAAAATTGCGTTGCGCGAGGGCATGCAACGTTCGGTCGA
TTGGTGCGTCAAAAACGGTCAGTCATTCTAG

Upstream 100 bases:

>100_bases
CCCTATTGTCTTCGCGCTCAACGACAAGACCAGCTGGTTTATCGGCGCCCTCATCGCGTCGGCGTTCGTGATGGCCATGT
GAAATTAAGCAAATGCCAAT

Downstream 100 bases:

>100_bases
TCAAGCTTGCCGAGGAGCTGTGAGGCCGTCAGTGCTGGTGCAAACTTCTTCAATTGTCTCCAGCGCACTTGTTTCAAGTG
CTATAGGATATGCCATAGGT

Product: nucleotide sugar epimerase/dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MQEITPITLNAPLVLLTGAAGWLGGRVAAALTTGLPDAGLLANGSFRVRALVPKGEDISELRKQGMEIATGDLREMQSVR
AFVAGAEGAVLIHMAGIIHPKNVAQFEAINTQGTINLVTAAQKAGVRRAVVMSSNSPVGFNPHSDHRFTEESPYDPHAGY
GRSKMLMERALRAEVAAGSTMEIVIVRAPWFYGPNQPSRQTLFFKMVKEGKFPIIGSGRNRRSMGYTDNLAQGILLAAVH
ERAAGDIFWLADETPYTMNEIIEVVGMVLHEDFGMTVKPNPFRLPDIVGGAATILDATLQYAGIYHQKIHVLSEMNKTIA
CDITKARKVLGYAPKIALREGMQRSVDWCVKNGQSF

Sequences:

>Translated_356_residues
MQEITPITLNAPLVLLTGAAGWLGGRVAAALTTGLPDAGLLANGSFRVRALVPKGEDISELRKQGMEIATGDLREMQSVR
AFVAGAEGAVLIHMAGIIHPKNVAQFEAINTQGTINLVTAAQKAGVRRAVVMSSNSPVGFNPHSDHRFTEESPYDPHAGY
GRSKMLMERALRAEVAAGSTMEIVIVRAPWFYGPNQPSRQTLFFKMVKEGKFPIIGSGRNRRSMGYTDNLAQGILLAAVH
ERAAGDIFWLADETPYTMNEIIEVVGMVLHEDFGMTVKPNPFRLPDIVGGAATILDATLQYAGIYHQKIHVLSEMNKTIA
CDITKARKVLGYAPKIALREGMQRSVDWCVKNGQSF
>Mature_356_residues
MQEITPITLNAPLVLLTGAAGWLGGRVAAALTTGLPDAGLLANGSFRVRALVPKGEDISELRKQGMEIATGDLREMQSVR
AFVAGAEGAVLIHMAGIIHPKNVAQFEAINTQGTINLVTAAQKAGVRRAVVMSSNSPVGFNPHSDHRFTEESPYDPHAGY
GRSKMLMERALRAEVAAGSTMEIVIVRAPWFYGPNQPSRQTLFFKMVKEGKFPIIGSGRNRRSMGYTDNLAQGILLAAVH
ERAAGDIFWLADETPYTMNEIIEVVGMVLHEDFGMTVKPNPFRLPDIVGGAATILDATLQYAGIYHQKIHVLSEMNKTIA
CDITKARKVLGYAPKIALREGMQRSVDWCVKNGQSF

Specific function: Putative nucleotide sugar epimerase/dehydrogenase

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081792, Length=308, Percent_Identity=25, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4NL_RHISN (P55584)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443995.1
- ProteinModelPortal:   P55584
- GeneID:   962248
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02300
- HOGENOM:   HBG655913
- ProtClustDB:   CLSK507053
- InterPro:   IPR001509
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720

Pfam domain/function: PF01370 Epimerase

EC number: NA

Molecular weight: Translated: 38669; Mature: 38669

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEITPITLNAPLVLLTGAAGWLGGRVAAALTTGLPDAGLLANGSFRVRALVPKGEDISE
CCCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCHHH
LRKQGMEIATGDLREMQSVRAFVAGAEGAVLIHMAGIIHPKNVAQFEAINTQGTINLVTA
HHHCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEH
AQKAGVRRAVVMSSNSPVGFNPHSDHRFTEESPYDPHAGYGRSKMLMERALRAEVAAGST
HHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
MEIVIVRAPWFYGPNQPSRQTLFFKMVKEGKFPIIGSGRNRRSMGYTDNLAQGILLAAVH
EEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
ERAAGDIFWLADETPYTMNEIIEVVGMVLHEDFGMTVKPNPFRLPDIVGGAATILDATLQ
HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCHHHHHHHHHHH
YAGIYHQKIHVLSEMNKTIACDITKARKVLGYAPKIALREGMQRSVDWCVKNGQSF
HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQEITPITLNAPLVLLTGAAGWLGGRVAAALTTGLPDAGLLANGSFRVRALVPKGEDISE
CCCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCHHH
LRKQGMEIATGDLREMQSVRAFVAGAEGAVLIHMAGIIHPKNVAQFEAINTQGTINLVTA
HHHCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEH
AQKAGVRRAVVMSSNSPVGFNPHSDHRFTEESPYDPHAGYGRSKMLMERALRAEVAAGST
HHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
MEIVIVRAPWFYGPNQPSRQTLFFKMVKEGKFPIIGSGRNRRSMGYTDNLAQGILLAAVH
EEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
ERAAGDIFWLADETPYTMNEIIEVVGMVLHEDFGMTVKPNPFRLPDIVGGAATILDATLQ
HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCHHHHHHHHHHH
YAGIYHQKIHVLSEMNKTIACDITKARKVLGYAPKIALREGMQRSVDWCVKNGQSF
HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424