Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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Identifier: 16519838
GI number: 16519838
Start: 353560
End: 354138
Strand: Direct
Name: Not Available
Synonym: NGR_a02670
Alternate gene names: 16519838
Gene position: 353560-354138 (Clockwise)
Preceding gene: 16519839
Following gene: 16519835
Centisome position: 65.94
GC content: 57.69
Gene sequence:
>579_bases GTGGTCCGTTACAATGCCGTCGAAGATCCGCTGTGCTATCCCGGCACCCATGTGCTGCGCAACAGGGCGAATATCCCGGA TCAGAATGAGCTGGATGAGTTCGAGCAATTGATGTTCGATTCCCGTGCGCGGGAAGCGCTTCCGGACGGCGATCTGGATT TCGCCCACTATCGCGCGTTACACCGACACTTCTTTCAGGACGTTTATGAATGGGCCGGGCAAACACGGATTATCCGCACC GGCAAGGGTGAGAACTGGTTTTGCTATCCGGAATATATCGAAAGGGAAGCCAATCGCCTATTTGCCGAACTTGCCGCTCG CGACCACCTTGCCAGGACGGAAAGCAAGGAGGCCTTCGCCAAAGGCGCAAGCTGGTTTCTCGCGGAGATCAACGCGATTC ATCCATTTCGCGAAGGCAACGGCCGCACCCAACTGGTCTTCCTGACGATGCTCACTCGCTATGCGGGATACGAGCTCGAC GAGAGCAAGCTGGAGCCGAAGCGGTTTCTGGACGCCATGATCCGGAGCTTCAGCGGCGACCTGGCGCCGTTGGCGGCCGA AATCAGGCGGATGATTTAG
Upstream 100 bases:
>100_bases TGCCGCGTCAAAGGCGCTTTCGGAGAAGCTGACCGCGAGCGGCCTCAAGGGTGACGCCTACCGTAGCGAGATCGTCAAGG CCTTTAAGAAGGGCTGACGG
Downstream 100 bases:
>100_bases CGGCTTCGTCTTCGTCGGATCTTTGCCAGAGCACCCGCTTCGTCTGTCCTTCCCCGATGACGATCTGCCACCTTGTGAAC CCCGCGCGAAGGTCTCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MVRYNAVEDPLCYPGTHVLRNRANIPDQNELDEFEQLMFDSRAREALPDGDLDFAHYRALHRHFFQDVYEWAGQTRIIRT GKGENWFCYPEYIEREANRLFAELAARDHLARTESKEAFAKGASWFLAEINAIHPFREGNGRTQLVFLTMLTRYAGYELD ESKLEPKRFLDAMIRSFSGDLAPLAAEIRRMI
Sequences:
>Translated_192_residues MVRYNAVEDPLCYPGTHVLRNRANIPDQNELDEFEQLMFDSRAREALPDGDLDFAHYRALHRHFFQDVYEWAGQTRIIRT GKGENWFCYPEYIEREANRLFAELAARDHLARTESKEAFAKGASWFLAEINAIHPFREGNGRTQLVFLTMLTRYAGYELD ESKLEPKRFLDAMIRSFSGDLAPLAAEIRRMI >Mature_192_residues MVRYNAVEDPLCYPGTHVLRNRANIPDQNELDEFEQLMFDSRAREALPDGDLDFAHYRALHRHFFQDVYEWAGQTRIIRT GKGENWFCYPEYIEREANRLFAELAARDHLARTESKEAFAKGASWFLAEINAIHPFREGNGRTQLVFLTMLTRYAGYELD ESKLEPKRFLDAMIRSFSGDLAPLAAEIRRMI
Specific function: Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins
COG id: COG2184
COG function: function code D; Protein involved in cell division
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain
Homologues:
Organism=Escherichia coli, GI1789761, Length=192, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4LH_RHISN (P55548)
Other databases:
- EMBL: U00090 - RefSeq: NP_443958.1 - ProteinModelPortal: P55548 - SMR: P55548 - GeneID: 962359 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a02670 - HOGENOM: HBG400904 - ProtClustDB: CLSK893864 - InterPro: IPR003812
Pfam domain/function: PF02661 Fic
EC number: NA
Molecular weight: Translated: 22439; Mature: 22439
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS51459 FIDO
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRYNAVEDPLCYPGTHVLRNRANIPDQNELDEFEQLMFDSRAREALPDGDLDFAHYRAL CCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH HRHFFQDVYEWAGQTRIIRTGKGENWFCYPEYIEREANRLFAELAARDHLARTESKEAFA HHHHHHHHHHHCCCEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGASWFLAEINAIHPFREGNGRTQLVFLTMLTRYAGYELDESKLEPKRFLDAMIRSFSGD HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCC LAPLAAEIRRMI HHHHHHHHHHHC >Mature Secondary Structure MVRYNAVEDPLCYPGTHVLRNRANIPDQNELDEFEQLMFDSRAREALPDGDLDFAHYRAL CCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH HRHFFQDVYEWAGQTRIIRTGKGENWFCYPEYIEREANRLFAELAARDHLARTESKEAFA HHHHHHHHHHHCCCEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGASWFLAEINAIHPFREGNGRTQLVFLTMLTRYAGYELDESKLEPKRFLDAMIRSFSGD HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCC LAPLAAEIRRMI HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424