Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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Identifier: 16519808

GI number: 16519808

Start: 385782

End: 386237

Strand: Reverse

Name: Not Available

Synonym: NGR_a02970

Alternate gene names: NA

Gene position: 386237-385782 (Counterclockwise)

Preceding gene: 16519807

Following gene: 16519809

Centisome position: 72.04

GC content: 45.83

Gene sequence:

>456_bases
ATGAAAACCTTAATCGTCGAAGATAACCCTAAAAAGAGAGCCTCTTTGGTTGAATACTATTCGTCCGAGTTTCCTTCGGA
TGACCTGGAGGTGACATCTGCTTTAATATCAGGACTGCGGGTCGCGCGAGATACTAAGCCGGAGTTCATTATTCTGGACA
TGACTCTTCCCAATTACTCGCCCGATGAAAACAAAGGCTCGCGTATCGAGCTGATGCCTTTCGCTGGCCGCGAGTTTGTG
ATGCGAGTAAATCGAATGTCTATTAAGACGAAGGTGATAATTGTTTCAATGTTTGAGACTTTCGGCGTGGCCCCTCGCTT
GATAACGCTCAACAGTTTGGACGCTGAGTTAAGGGACAGATACCCCAATGTCTTTGTTGAGGCGGTTCATTATTCCCAGG
CCCAAGCAGATTGGAAAACAGCAATTAAAAATGCACGGCTTAGCTTGGATAGATAA

Upstream 100 bases:

>100_bases
GAGACGGAAAACCAAACACCGTGATTTCAGTTGATCATTCCACGTGCAAATTTCATGTAAAGATGGCCTTCAAAATAATA
CAGATATGAGGCTCACCCCG

Downstream 100 bases:

>100_bases
ATGCGAATTCTGATCGTTGATGACGAAAATACCAAGGTTGTTGAAATCTGTGGCGTTTTACGAGACGCCCAAATTACAGA
GGAGTCGATTACTGTCGCTA

Product: response regulator receiver protein of 17.3 kDa

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKTLIVEDNPKKRASLVEYYSSEFPSDDLEVTSALISGLRVARDTKPEFIILDMTLPNYSPDENKGSRIELMPFAGREFV
MRVNRMSIKTKVIIVSMFETFGVAPRLITLNSLDAELRDRYPNVFVEAVHYSQAQADWKTAIKNARLSLDR

Sequences:

>Translated_151_residues
MKTLIVEDNPKKRASLVEYYSSEFPSDDLEVTSALISGLRVARDTKPEFIILDMTLPNYSPDENKGSRIELMPFAGREFV
MRVNRMSIKTKVIIVSMFETFGVAPRLITLNSLDAELRDRYPNVFVEAVHYSQAQADWKTAIKNARLSLDR
>Mature_151_residues
MKTLIVEDNPKKRASLVEYYSSEFPSDDLEVTSALISGLRVARDTKPEFIILDMTLPNYSPDENKGSRIELMPFAGREFV
MRVNRMSIKTKVIIVSMFETFGVAPRLITLNSLDAELRDRYPNVFVEAVHYSQAQADWKTAIKNARLSLDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4JR_RHISN (P55518)

Other databases:

- EMBL:   U00090
- PIR:   T28645
- RefSeq:   NP_443928.1
- ProteinModelPortal:   P55518
- GeneID:   962541
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02970
- HOGENOM:   HBG654681
- ProtClustDB:   CLSK2393509
- InterPro:   IPR011006
- InterPro:   IPR001789
- SMART:   SM00448

Pfam domain/function: SSF52172 CheY_like

EC number: NA

Molecular weight: Translated: 17262; Mature: 17262

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLIVEDNPKKRASLVEYYSSEFPSDDLEVTSALISGLRVARDTKPEFIILDMTLPNYS
CCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
PDENKGSRIELMPFAGREFVMRVNRMSIKTKVIIVSMFETFGVAPRLITLNSLDAELRDR
CCCCCCCEEEEEECCCHHHHHHHHHHCHHHEEEEEEEHHHHCCCCEEEEECCCCHHHHHC
YPNVFVEAVHYSQAQADWKTAIKNARLSLDR
CCCCEEHHHHHHHHHHHHHHHHHHCCEECCC
>Mature Secondary Structure
MKTLIVEDNPKKRASLVEYYSSEFPSDDLEVTSALISGLRVARDTKPEFIILDMTLPNYS
CCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
PDENKGSRIELMPFAGREFVMRVNRMSIKTKVIIVSMFETFGVAPRLITLNSLDAELRDR
CCCCCCCEEEEEECCCHHHHHHHHHHCHHHEEEEEEEHHHHCCCCEEEEECCCCHHHHHC
YPNVFVEAVHYSQAQADWKTAIKNARLSLDR
CCCCEEHHHHHHHHHHHHHHHHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424