Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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Identifier: 16519808
GI number: 16519808
Start: 385782
End: 386237
Strand: Reverse
Name: Not Available
Synonym: NGR_a02970
Alternate gene names: NA
Gene position: 386237-385782 (Counterclockwise)
Preceding gene: 16519807
Following gene: 16519809
Centisome position: 72.04
GC content: 45.83
Gene sequence:
>456_bases ATGAAAACCTTAATCGTCGAAGATAACCCTAAAAAGAGAGCCTCTTTGGTTGAATACTATTCGTCCGAGTTTCCTTCGGA TGACCTGGAGGTGACATCTGCTTTAATATCAGGACTGCGGGTCGCGCGAGATACTAAGCCGGAGTTCATTATTCTGGACA TGACTCTTCCCAATTACTCGCCCGATGAAAACAAAGGCTCGCGTATCGAGCTGATGCCTTTCGCTGGCCGCGAGTTTGTG ATGCGAGTAAATCGAATGTCTATTAAGACGAAGGTGATAATTGTTTCAATGTTTGAGACTTTCGGCGTGGCCCCTCGCTT GATAACGCTCAACAGTTTGGACGCTGAGTTAAGGGACAGATACCCCAATGTCTTTGTTGAGGCGGTTCATTATTCCCAGG CCCAAGCAGATTGGAAAACAGCAATTAAAAATGCACGGCTTAGCTTGGATAGATAA
Upstream 100 bases:
>100_bases GAGACGGAAAACCAAACACCGTGATTTCAGTTGATCATTCCACGTGCAAATTTCATGTAAAGATGGCCTTCAAAATAATA CAGATATGAGGCTCACCCCG
Downstream 100 bases:
>100_bases ATGCGAATTCTGATCGTTGATGACGAAAATACCAAGGTTGTTGAAATCTGTGGCGTTTTACGAGACGCCCAAATTACAGA GGAGTCGATTACTGTCGCTA
Product: response regulator receiver protein of 17.3 kDa
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKTLIVEDNPKKRASLVEYYSSEFPSDDLEVTSALISGLRVARDTKPEFIILDMTLPNYSPDENKGSRIELMPFAGREFV MRVNRMSIKTKVIIVSMFETFGVAPRLITLNSLDAELRDRYPNVFVEAVHYSQAQADWKTAIKNARLSLDR
Sequences:
>Translated_151_residues MKTLIVEDNPKKRASLVEYYSSEFPSDDLEVTSALISGLRVARDTKPEFIILDMTLPNYSPDENKGSRIELMPFAGREFV MRVNRMSIKTKVIIVSMFETFGVAPRLITLNSLDAELRDRYPNVFVEAVHYSQAQADWKTAIKNARLSLDR >Mature_151_residues MKTLIVEDNPKKRASLVEYYSSEFPSDDLEVTSALISGLRVARDTKPEFIILDMTLPNYSPDENKGSRIELMPFAGREFV MRVNRMSIKTKVIIVSMFETFGVAPRLITLNSLDAELRDRYPNVFVEAVHYSQAQADWKTAIKNARLSLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4JR_RHISN (P55518)
Other databases:
- EMBL: U00090 - PIR: T28645 - RefSeq: NP_443928.1 - ProteinModelPortal: P55518 - GeneID: 962541 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a02970 - HOGENOM: HBG654681 - ProtClustDB: CLSK2393509 - InterPro: IPR011006 - InterPro: IPR001789 - SMART: SM00448
Pfam domain/function: SSF52172 CheY_like
EC number: NA
Molecular weight: Translated: 17262; Mature: 17262
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLIVEDNPKKRASLVEYYSSEFPSDDLEVTSALISGLRVARDTKPEFIILDMTLPNYS CCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC PDENKGSRIELMPFAGREFVMRVNRMSIKTKVIIVSMFETFGVAPRLITLNSLDAELRDR CCCCCCCEEEEEECCCHHHHHHHHHHCHHHEEEEEEEHHHHCCCCEEEEECCCCHHHHHC YPNVFVEAVHYSQAQADWKTAIKNARLSLDR CCCCEEHHHHHHHHHHHHHHHHHHCCEECCC >Mature Secondary Structure MKTLIVEDNPKKRASLVEYYSSEFPSDDLEVTSALISGLRVARDTKPEFIILDMTLPNYS CCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC PDENKGSRIELMPFAGREFVMRVNRMSIKTKVIIVSMFETFGVAPRLITLNSLDAELRDR CCCCCCCEEEEEECCCHHHHHHHHHHCHHHEEEEEEEHHHHCCCCEEEEECCCCHHHHHC YPNVFVEAVHYSQAQADWKTAIKNARLSLDR CCCCEEHHHHHHHHHHHHHHHHHHCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424