Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16519786

GI number: 16519786

Start: 408763

End: 410061

Strand: Direct

Name: Not Available

Synonym: NGR_a03200

Alternate gene names: NA

Gene position: 408763-410061 (Clockwise)

Preceding gene: 16519787

Following gene: 16519785

Centisome position: 76.24

GC content: 60.74

Gene sequence:

>1299_bases
GTGACAGCCTACTTCTCCACCCCTGAAAAGATCCAAGCGTCGGCCGAGCGCATCGCAGCCATCATCGATGCCAAACCGAA
CGGGTATTTCTATCCTCCGGCTTATTTCGGCAAACCTGGATTCCTGAATTTCACGCCGAATGTCGAAGTCGCTCAACGAG
CCGCTTTAAAAAAGAATCTTCCCGGCATTTTGGCGACGTTCGCTTGCGGTACCGTTCAGCGCGAAGCCGGGATCGAGCTT
CAAAAACAGACCAGCTACGGCAACTGGAACGGACCTGGCTTTTCCGGCTTCAGCACCGGACAGCAGGATGGCAGCGGCGA
TCTCATTTTCCAGTTGTTGGTGGCCAAGGCAATGCCCCCCGGCGAATGTCAGCCGAACGCGGCGGGGGGCCTCAACCGGA
ACTTCGATGCCACGGCATTCAAGAATAGTTCGCATCCAGAAATCCCACCATTTGCGACCATCACCGACATTCCGAGCGTG
TGGAACCAACAGGAGCGTTCGCTCGCCCAGTGGGACGGCAGCGTGAAGATGGCGTTCTGGCGCAACATCGCCGCTCAGCT
TCCGATCGTCGGCGACCCTTCCAAGATCGATCTCGTCAATACCGGCGTTGTCGCCAATTTCCTCGACGGCCTGCCACCGG
CCGCCTACCCGTTCGATGTCGACATGGCGAGCGCCGTGCGCGGCGAAGCGCTATTCAAAGACAATTGCGCCGTCTGCCAC
AAGCCGCACAACGACACAATCTACCAGTTCCGCGATATAGGCACGGACATGAACCGCGCGGCCGTCCTCAATGACGCGGC
GTTTCACCTTTTCGCCGCCGGCTTTCAGGCAAGCTGCCACGATCAGGATTTCCTCTATCGCAGCCCGACGGGGGAGGAAG
TCCGTCCCTGCCGGATGGCGGGCGAGGACGTGATCACCGCCCGCACGACGCCGGCGGTCCAGGGCTATGTCGCCGAGGTG
CTTGACGGGGTGTGGGCGCGCGCGCCCTACCTGCACAATGGTTCCATTCCGACGCTGTACCATCTCCTGGTGCCGGCGAG
CCGCCCGGAGCAATTCCTGCGCGGCGCCATCCAATACGACACTGCGAAAGTCGGATATGTCTTGGATCCGGCCGTTACCG
GCCTCGTTGCCGACACGTCGCCGACGCTGACCATCTACGACAGGCGAAAGGACGGCCATGCTGGCACGGGCCACGACCGC
AATCTCGTGGTCGATGGCAAGCTCCGTCGACTCGACTGGAGTGGCCCGCAATATGCCGATGCCCTCAAGGACCTCATCGA
ATATCTGAAGACCCGCTAG

Upstream 100 bases:

>100_bases
CATTGGACAGGTACAGACGCCGGATGGACCGGCGGTCGTCGAGGGTGCGCCGAACACGAAGATGGACGTGCGCAAGTGGC
GGGATGCCTACTCGCGAACG

Downstream 100 bases:

>100_bases
CGCGGGCTCGCGTTCACCCCACTGATAGCTTGGAGCACTGGCGCAATGACCGAAACTGCCTCGTCCGACGTCAATGCCGG
GATCGCTGAAATCGATGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MTAYFSTPEKIQASAERIAAIIDAKPNGYFYPPAYFGKPGFLNFTPNVEVAQRAALKKNLPGILATFACGTVQREAGIEL
QKQTSYGNWNGPGFSGFSTGQQDGSGDLIFQLLVAKAMPPGECQPNAAGGLNRNFDATAFKNSSHPEIPPFATITDIPSV
WNQQERSLAQWDGSVKMAFWRNIAAQLPIVGDPSKIDLVNTGVVANFLDGLPPAAYPFDVDMASAVRGEALFKDNCAVCH
KPHNDTIYQFRDIGTDMNRAAVLNDAAFHLFAAGFQASCHDQDFLYRSPTGEEVRPCRMAGEDVITARTTPAVQGYVAEV
LDGVWARAPYLHNGSIPTLYHLLVPASRPEQFLRGAIQYDTAKVGYVLDPAVTGLVADTSPTLTIYDRRKDGHAGTGHDR
NLVVDGKLRRLDWSGPQYADALKDLIEYLKTR

Sequences:

>Translated_432_residues
MTAYFSTPEKIQASAERIAAIIDAKPNGYFYPPAYFGKPGFLNFTPNVEVAQRAALKKNLPGILATFACGTVQREAGIEL
QKQTSYGNWNGPGFSGFSTGQQDGSGDLIFQLLVAKAMPPGECQPNAAGGLNRNFDATAFKNSSHPEIPPFATITDIPSV
WNQQERSLAQWDGSVKMAFWRNIAAQLPIVGDPSKIDLVNTGVVANFLDGLPPAAYPFDVDMASAVRGEALFKDNCAVCH
KPHNDTIYQFRDIGTDMNRAAVLNDAAFHLFAAGFQASCHDQDFLYRSPTGEEVRPCRMAGEDVITARTTPAVQGYVAEV
LDGVWARAPYLHNGSIPTLYHLLVPASRPEQFLRGAIQYDTAKVGYVLDPAVTGLVADTSPTLTIYDRRKDGHAGTGHDR
NLVVDGKLRRLDWSGPQYADALKDLIEYLKTR
>Mature_431_residues
TAYFSTPEKIQASAERIAAIIDAKPNGYFYPPAYFGKPGFLNFTPNVEVAQRAALKKNLPGILATFACGTVQREAGIELQ
KQTSYGNWNGPGFSGFSTGQQDGSGDLIFQLLVAKAMPPGECQPNAAGGLNRNFDATAFKNSSHPEIPPFATITDIPSVW
NQQERSLAQWDGSVKMAFWRNIAAQLPIVGDPSKIDLVNTGVVANFLDGLPPAAYPFDVDMASAVRGEALFKDNCAVCHK
PHNDTIYQFRDIGTDMNRAAVLNDAAFHLFAAGFQASCHDQDFLYRSPTGEEVRPCRMAGEDVITARTTPAVQGYVAEVL
DGVWARAPYLHNGSIPTLYHLLVPASRPEQFLRGAIQYDTAKVGYVLDPAVTGLVADTSPTLTIYDRRKDGHAGTGHDRN
LVVDGKLRRLDWSGPQYADALKDLIEYLKTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4IM_RHISN (P55496)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443906.1
- ProteinModelPortal:   P55496
- GeneID:   962615
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03200
- GO:   GO:0006810
- InterPro:   IPR009056
- Gene3D:   G3DSA:1.10.760.10

Pfam domain/function: SSF46626 Cytochrome_c

EC number: NA

Molecular weight: Translated: 47090; Mature: 46959

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS51007 CYTC

Important sites: BINDING 236-236 BINDING 239-239

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAYFSTPEKIQASAERIAAIIDAKPNGYFYPPAYFGKPGFLNFTPNVEVAQRAALKKNL
CCCCCCCHHHHHHHHHHHHHEEECCCCCEECCCHHCCCCCCEECCCCHHHHHHHHHHHCC
PGILATFACGTVQREAGIELQKQTSYGNWNGPGFSGFSTGQQDGSGDLIFQLLVAKAMPP
CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
GECQPNAAGGLNRNFDATAFKNSSHPEIPPFATITDIPSVWNQQERSLAQWDGSVKMAFW
CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHCCHHHHCHHHHHHHHCCCCEEHHHH
RNIAAQLPIVGDPSKIDLVNTGVVANFLDGLPPAAYPFDVDMASAVRGEALFKDNCAVCH
HHHHHCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHCCCCCCEEE
KPHNDTIYQFRDIGTDMNRAAVLNDAAFHLFAAGFQASCHDQDFLYRSPTGEEVRPCRMA
CCCCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHC
GEDVITARTTPAVQGYVAEVLDGVWARAPYLHNGSIPTLYHLLVPASRPEQFLRGAIQYD
CCCEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHCC
TAKVGYVLDPAVTGLVADTSPTLTIYDRRKDGHAGTGHDRNLVVDGKLRRLDWSGPQYAD
CCCCCEEECCHHHEEEECCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEECCCCCHHHH
ALKDLIEYLKTR
HHHHHHHHHHCC
>Mature Secondary Structure 
TAYFSTPEKIQASAERIAAIIDAKPNGYFYPPAYFGKPGFLNFTPNVEVAQRAALKKNL
CCCCCCHHHHHHHHHHHHHEEECCCCCEECCCHHCCCCCCEECCCCHHHHHHHHHHHCC
PGILATFACGTVQREAGIELQKQTSYGNWNGPGFSGFSTGQQDGSGDLIFQLLVAKAMPP
CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
GECQPNAAGGLNRNFDATAFKNSSHPEIPPFATITDIPSVWNQQERSLAQWDGSVKMAFW
CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHCCHHHHCHHHHHHHHCCCCEEHHHH
RNIAAQLPIVGDPSKIDLVNTGVVANFLDGLPPAAYPFDVDMASAVRGEALFKDNCAVCH
HHHHHCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHCCCCCCEEE
KPHNDTIYQFRDIGTDMNRAAVLNDAAFHLFAAGFQASCHDQDFLYRSPTGEEVRPCRMA
CCCCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHC
GEDVITARTTPAVQGYVAEVLDGVWARAPYLHNGSIPTLYHLLVPASRPEQFLRGAIQYD
CCCEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHCC
TAKVGYVLDPAVTGLVADTSPTLTIYDRRKDGHAGTGHDRNLVVDGKLRRLDWSGPQYAD
CCCCCEEECCHHHEEEECCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEECCCCCHHHH
ALKDLIEYLKTR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424