| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is hemH [H]
Identifier: 16273084
GI number: 16273084
Start: 1229539
End: 1230510
Strand: Reverse
Name: hemH [H]
Synonym: HI1160
Alternate gene names: 16273084
Gene position: 1230510-1229539 (Counterclockwise)
Preceding gene: 16273085
Following gene: 16273083
Centisome position: 67.24
GC content: 37.96
Gene sequence:
>972_bases ATGACAAAACCAGCAAAAATCGGCGTATTACTTGCCAATCTAGGCACGCCAGATAGCCCAACGCCAAAGTCAATTAGCCG TTATTTATGGCAATTCTTAACGGATCCTCGCGTGGTCGATTTACCCCGTTGCAAATGGTATCCTCTACTCAAAGCCATTA TTTTGCCATTGCGTTCAAAACGTATCGCCAAAAATTATCAAGCCATTTGGACAGAGCAAGGATCGCCTTTACTTGCTATT TCACGACAACAAAAAGACGCATTACAAGCCTATTTAGATAATCAAAATATCGATACTCAAGTAGAAATTGCCATGACTTA TGGCAATCCATCAATGCAAAGTGCGGTGAAAAATTTGCTTAAAAATCAAGTTGAGCGAATTATTGTCTTGCCTCTTTATC CGCAATACTCTAGCTCAACTACAGGCGCAGTATTTGATGCTTTCGCTAACGCTCTTAAAGAAGAACGAGGATTACTGCCT TTTGATTTCATCCATTCTTATCATATTGATGAAAATTACATTAATGCCTTAGCCGACTCCATAAAAGTGCGGTTAAAATC CGATGAGTTTTTGTTATTTTCTTATCACGGTATTCCTCTGCGTTACGAAAAAATGGGCGATTATTATCGTGAACATTGTA AACAAACGACTATTGCAGTTGTTAATAAGCTGGGCTTAACAGAAAACCAATGGAGAATGACGTTTCAATCTCGCTTTGGC CGTGAAGAATGGCTGCAACCTTATACCGATAAATTTTTAGAATCTGCTGCAGCACAGAACATTCAAAAAATTGCCGTTAT TTGCCCGGGTTTCTCCGTAGATTGTTTAGAAACCATTGAAGAAATTGACGAAGAAAATCGAGAAAATTTCCTAAACAATG GCGGACAATCTTATCAATATATTCCTGCACTTAATGTAGAGCATGCACATATTGAAATGATGGGAAAATTGATCCTAGAA AAACTTACTTAA
Upstream 100 bases:
>100_bases TTAATTTGGGCAGAAATATCCAAGTTTGGCAAATTGACATCCGCACAGAAGAGAATAAACTTTGTTGTGTTTCTAGATTA ACCCTTTCCGTAATCAATTT
Downstream 100 bases:
>100_bases TAATAGAAATGGTAAAACGTTTCTAAAATCTTCCGCACTTTGCTAAAATCAGCCATTATTTTTTTCACAAGGATAAAACA TGGCTGATTTTCCTTTTATC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTKPAKIGVLLANLGTPDSPTPKSISRYLWQFLTDPRVVDLPRCKWYPLLKAIILPLRSKRIAKNYQAIWTEQGSPLLAI SRQQKDALQAYLDNQNIDTQVEIAMTYGNPSMQSAVKNLLKNQVERIIVLPLYPQYSSSTTGAVFDAFANALKEERGLLP FDFIHSYHIDENYINALADSIKVRLKSDEFLLFSYHGIPLRYEKMGDYYREHCKQTTIAVVNKLGLTENQWRMTFQSRFG REEWLQPYTDKFLESAAAQNIQKIAVICPGFSVDCLETIEEIDEENRENFLNNGGQSYQYIPALNVEHAHIEMMGKLILE KLT
Sequences:
>Translated_323_residues MTKPAKIGVLLANLGTPDSPTPKSISRYLWQFLTDPRVVDLPRCKWYPLLKAIILPLRSKRIAKNYQAIWTEQGSPLLAI SRQQKDALQAYLDNQNIDTQVEIAMTYGNPSMQSAVKNLLKNQVERIIVLPLYPQYSSSTTGAVFDAFANALKEERGLLP FDFIHSYHIDENYINALADSIKVRLKSDEFLLFSYHGIPLRYEKMGDYYREHCKQTTIAVVNKLGLTENQWRMTFQSRFG REEWLQPYTDKFLESAAAQNIQKIAVICPGFSVDCLETIEEIDEENRENFLNNGGQSYQYIPALNVEHAHIEMMGKLILE KLT >Mature_322_residues TKPAKIGVLLANLGTPDSPTPKSISRYLWQFLTDPRVVDLPRCKWYPLLKAIILPLRSKRIAKNYQAIWTEQGSPLLAIS RQQKDALQAYLDNQNIDTQVEIAMTYGNPSMQSAVKNLLKNQVERIIVLPLYPQYSSSTTGAVFDAFANALKEERGLLPF DFIHSYHIDENYINALADSIKVRLKSDEFLLFSYHGIPLRYEKMGDYYREHCKQTTIAVVNKLGLTENQWRMTFQSRFGR EEWLQPYTDKFLESAAAQNIQKIAVICPGFSVDCLETIEEIDEENRENFLNNGGQSYQYIPALNVEHAHIEMMGKLILEK LT
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=292, Percent_Identity=26.3698630136986, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI60499021, Length=292, Percent_Identity=26.3698630136986, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1786681, Length=316, Percent_Identity=51.5822784810127, Blast_Score=326, Evalue=1e-90, Organism=Saccharomyces cerevisiae, GI6324750, Length=338, Percent_Identity=25.7396449704142, Blast_Score=95, Evalue=1e-20, Organism=Drosophila melanogaster, GI17864156, Length=294, Percent_Identity=25.8503401360544, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24651774, Length=259, Percent_Identity=26.6409266409266, Blast_Score=84, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 37089; Mature: 36958
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPAKIGVLLANLGTPDSPTPKSISRYLWQFLTDPRVVDLPRCKWYPLLKAIILPLRSK CCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHH RIAKNYQAIWTEQGSPLLAISRQQKDALQAYLDNQNIDTQVEIAMTYGNPSMQSAVKNLL HHHHHHHHHEECCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHH KNQVERIIVLPLYPQYSSSTTGAVFDAFANALKEERGLLPFDFIHSYHIDENYINALADS HHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH IKVRLKSDEFLLFSYHGIPLRYEKMGDYYREHCKQTTIAVVNKLGLTENQWRMTFQSRFG HEEEECCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC REEWLQPYTDKFLESAAAQNIQKIAVICPGFSVDCLETIEEIDEENRENFLNNGGQSYQY HHHHCCHHHHHHHHHHHHHCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE IPALNVEHAHIEMMGKLILEKLT ECCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TKPAKIGVLLANLGTPDSPTPKSISRYLWQFLTDPRVVDLPRCKWYPLLKAIILPLRSK CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHH RIAKNYQAIWTEQGSPLLAISRQQKDALQAYLDNQNIDTQVEIAMTYGNPSMQSAVKNLL HHHHHHHHHEECCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHH KNQVERIIVLPLYPQYSSSTTGAVFDAFANALKEERGLLPFDFIHSYHIDENYINALADS HHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH IKVRLKSDEFLLFSYHGIPLRYEKMGDYYREHCKQTTIAVVNKLGLTENQWRMTFQSRFG HEEEECCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC REEWLQPYTDKFLESAAAQNIQKIAVICPGFSVDCLETIEEIDEENRENFLNNGGQSYQY HHHHCCHHHHHHHHHHHHHCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE IPALNVEHAHIEMMGKLILEKLT ECCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA