| Definition | Yersinia pestis Angola, complete genome. |
|---|---|
| Accession | NC_010159 |
| Length | 4,504,254 |
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The map label for this gene is 162419965
Identifier: 162419965
GI number: 162419965
Start: 269298
End: 270425
Strand: Direct
Name: 162419965
Synonym: YpAngola_A0259
Alternate gene names: NA
Gene position: 269298-270425 (Clockwise)
Preceding gene: 162419424
Following gene: 162418353
Centisome position: 5.98
GC content: 33.6
Gene sequence:
>1128_bases ATGCAATTAATTCTCAATAAAGATTTAATCAATAAAAAAGATAATAGGGAAAAGAGTGCTGTTGTCATTATCTCAACCCG AAAAGGGTTAAAAGATAAAATTTCCGAATATGTCCGATTGGCTGATATAAAAAACATCAAAGAAATAGATGATGATATTT TTAGCGCCGCCTCAATTTTGATACCGGATAATGTGAAAGGAATTATAATAGATATAAATGAGAATCATGATATCAACACT ATTCTTGATCTAATGAAAGTTCATACACCACGGGACTGTTGGTGTATATTAGTCGGTGATATTGATTCTATTAGCATCGC CCAACAATTTATTGAGCGTGGCATATTATATCTACATATCCAATCACAATTGGCCGATCTCACACAAAATTTACTAAAAG GTATCCAAATAGAGTCAGATAGAAAAGCATTTTTTATCAGTATACTGGGTTGCCGGGGAGGGATAGGCACGACATTACTC AGTTACCAACTGGCGCATGTGATCACCCAAATAAAAAAATCGCCTACCTTGTTATTACAAGGCAATCAAGGCTCGCAAGA TCTCGACTTGATCACTGAAAAAAAAATGGGCGAAGATATTACTGGTTACCAGAAAAATTTTGATCTTATGCGAGGAAACG AAAGAAAACTCAGTGAAGTTAATGAGCATAACAATAAAAAACATAACTTTATTATTTTCGATCAACCAATTCATAATGCA CGGAAAGAAAAAACACTCGATTATATCTCTAACTCAAATTGCATCATTCTGCTTATTGACCATAGTATGATGTCCGTTCG TGTAGCGAAAGAGTTTATTGATACTCTGAAAAGGTTCAAAAGAGATAATAGACAAGCCATTAGACTATTTATTTGCCTTA ACGAAAACAGGCCAATAACAAAAGATATGTTGACGACTTCTGATATCCAATCATTATTGGGCCATTCTATTGATACCGCG ATACCTTATATCAACAATGCGAAGAATTCACTGAATAGCCCTGACTATTTTGGTAGAAAGAAAACCAAGGTTGTTGAACT GGCAAAACAATCTTTAGGTATAAATATAAATTTATCCTCTCATACCAATATGTGGATTAGGGAAAAACTCAATAAGTTAT TTAAATAA
Upstream 100 bases:
>100_bases TACCGGAATAAAAATAATGATGTTCATGGGTGTGCTGTTTATAAAAATAGACATTACGCCATTATCGAATCATGGAATAA ACATTTATAATGGTGGTAGT
Downstream 100 bases:
>100_bases ATGAGGTTATTATGATTGTCCCTTTAAAAATACAAGAGTTAATGCGCGAAAGAATGTTAGCCAATATTGACATTAATAAA GTTGAACTCCTGGTTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Tight Adherence Protein TadZ; Tight Adherance Operon Protein
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MQLILNKDLINKKDNREKSAVVIISTRKGLKDKISEYVRLADIKNIKEIDDDIFSAASILIPDNVKGIIIDINENHDINT ILDLMKVHTPRDCWCILVGDIDSISIAQQFIERGILYLHIQSQLADLTQNLLKGIQIESDRKAFFISILGCRGGIGTTLL SYQLAHVITQIKKSPTLLLQGNQGSQDLDLITEKKMGEDITGYQKNFDLMRGNERKLSEVNEHNNKKHNFIIFDQPIHNA RKEKTLDYISNSNCIILLIDHSMMSVRVAKEFIDTLKRFKRDNRQAIRLFICLNENRPITKDMLTTSDIQSLLGHSIDTA IPYINNAKNSLNSPDYFGRKKTKVVELAKQSLGININLSSHTNMWIREKLNKLFK
Sequences:
>Translated_375_residues MQLILNKDLINKKDNREKSAVVIISTRKGLKDKISEYVRLADIKNIKEIDDDIFSAASILIPDNVKGIIIDINENHDINT ILDLMKVHTPRDCWCILVGDIDSISIAQQFIERGILYLHIQSQLADLTQNLLKGIQIESDRKAFFISILGCRGGIGTTLL SYQLAHVITQIKKSPTLLLQGNQGSQDLDLITEKKMGEDITGYQKNFDLMRGNERKLSEVNEHNNKKHNFIIFDQPIHNA RKEKTLDYISNSNCIILLIDHSMMSVRVAKEFIDTLKRFKRDNRQAIRLFICLNENRPITKDMLTTSDIQSLLGHSIDTA IPYINNAKNSLNSPDYFGRKKTKVVELAKQSLGININLSSHTNMWIREKLNKLFK >Mature_375_residues MQLILNKDLINKKDNREKSAVVIISTRKGLKDKISEYVRLADIKNIKEIDDDIFSAASILIPDNVKGIIIDINENHDINT ILDLMKVHTPRDCWCILVGDIDSISIAQQFIERGILYLHIQSQLADLTQNLLKGIQIESDRKAFFISILGCRGGIGTTLL SYQLAHVITQIKKSPTLLLQGNQGSQDLDLITEKKMGEDITGYQKNFDLMRGNERKLSEVNEHNNKKHNFIIFDQPIHNA RKEKTLDYISNSNCIILLIDHSMMSVRVAKEFIDTLKRFKRDNRQAIRLFICLNENRPITKDMLTTSDIQSLLGHSIDTA IPYINNAKNSLNSPDYFGRKKTKVVELAKQSLGININLSSHTNMWIREKLNKLFK
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42867; Mature: 42867
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLILNKDLINKKDNREKSAVVIISTRKGLKDKISEYVRLADIKNIKEIDDDIFSAASIL CCEEECCHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE IPDNVKGIIIDINENHDINTILDLMKVHTPRDCWCILVGDIDSISIAQQFIERGILYLHI ECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEE QSQLADLTQNLLKGIQIESDRKAFFISILGCRGGIGTTLLSYQLAHVITQIKKSPTLLLQ HHHHHHHHHHHHHCCEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEE GNQGSQDLDLITEKKMGEDITGYQKNFDLMRGNERKLSEVNEHNNKKHNFIIFDQPIHNA CCCCCCCHHHHHHHHCCCCCCCHHHCCHHHCCCCHHHHHHHHCCCCCCCEEEECCCHHHH RKEKTLDYISNSNCIILLIDHSMMSVRVAKEFIDTLKRFKRDNRQAIRLFICLNENRPIT HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCH KDMLTTSDIQSLLGHSIDTAIPYINNAKNSLNSPDYFGRKKTKVVELAKQSLGININLSS HHHHHHHHHHHHHCCCHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECC HTNMWIREKLNKLFK CCCHHHHHHHHHHCC >Mature Secondary Structure MQLILNKDLINKKDNREKSAVVIISTRKGLKDKISEYVRLADIKNIKEIDDDIFSAASIL CCEEECCHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE IPDNVKGIIIDINENHDINTILDLMKVHTPRDCWCILVGDIDSISIAQQFIERGILYLHI ECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEEE QSQLADLTQNLLKGIQIESDRKAFFISILGCRGGIGTTLLSYQLAHVITQIKKSPTLLLQ HHHHHHHHHHHHHCCEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEE GNQGSQDLDLITEKKMGEDITGYQKNFDLMRGNERKLSEVNEHNNKKHNFIIFDQPIHNA CCCCCCCHHHHHHHHCCCCCCCHHHCCHHHCCCCHHHHHHHHCCCCCCCEEEECCCHHHH RKEKTLDYISNSNCIILLIDHSMMSVRVAKEFIDTLKRFKRDNRQAIRLFICLNENRPIT HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCH KDMLTTSDIQSLLGHSIDTAIPYINNAKNSLNSPDYFGRKKTKVVELAKQSLGININLSS HHHHHHHHHHHHHCCCHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECC HTNMWIREKLNKLFK CCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA