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The map label for this gene is yhfZ [H]

Identifier: 162419732

GI number: 162419732

Start: 470435

End: 471016

Strand: Direct

Name: yhfZ [H]

Synonym: YpAngola_A0447

Alternate gene names: 162419732

Gene position: 470435-471016 (Clockwise)

Preceding gene: 162421929

Following gene: 162419192

Centisome position: 10.44

GC content: 46.05

Gene sequence:

>582_bases
ATGAGTAAAAGATTCATAAAAAAAGAAGGGTTAGCATTAGTCTCTATGGCGCGCTATTTAATTGGCGAACGCTCAGGAAA
TCGACTTAAAACTATTGATGATCTATCAGGTGATTTTGGTATTTCAGTCGGTGTGATTCAACACGCCTTGAAAGTACTGG
AAGCTGACGGGGCTATCGTGGTTGAACGCCGAGGCCGCAATGGCACGCGGCTTCTCGACCTGAACATGACGCTTCTGCTA
CAACAAGCCGATTTAGGCAATATGGTGTGTGCTATGCCGCTACCTTACACCAAACTTTATGAAGGCTTAGCCAGTGGTTT
AAAAGAACAATTCACCTTACTCCCCCTGTATTTTGCCCATATGCGAGGCGCTGAAGTCCGTATCGAATGCCTGATAGACG
GAGTCTACGATATGGCCGTCGTGTCGCATTTGGCCGCTAAAAACTACCTTAAGCAAGAGAAGGTCACGCTAGCGCTAAAT
TTAGGCCGTGGTTCTTATGTCGATGGTCATCAACTTATTTTTTGTAACGAACGGTGCAATAGTGATCCACACCCAACGCC
TGAAATCAGATCCAGGGGGTAA

Upstream 100 bases:

>100_bases
AAATAACTCAGTGACTGGGGGTGAGCAAGGGCAGCTAACCCCTGCATCTTGAAGGACGACGGGTATATTGCCCGGTAACA
TAAGGCTAGATCGTTACATC

Downstream 100 bases:

>100_bases
TCTGCTCTCCTGATTCAGGAGAGTTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATG
AGTAGCCGGGCGATTGCCAG

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSKRFIKKEGLALVSMARYLIGERSGNRLKTIDDLSGDFGISVGVIQHALKVLEADGAIVVERRGRNGTRLLDLNMTLLL
QQADLGNMVCAMPLPYTKLYEGLASGLKEQFTLLPLYFAHMRGAEVRIECLIDGVYDMAVVSHLAAKNYLKQEKVTLALN
LGRGSYVDGHQLIFCNERCNSDPHPTPEIRSRG

Sequences:

>Translated_193_residues
MSKRFIKKEGLALVSMARYLIGERSGNRLKTIDDLSGDFGISVGVIQHALKVLEADGAIVVERRGRNGTRLLDLNMTLLL
QQADLGNMVCAMPLPYTKLYEGLASGLKEQFTLLPLYFAHMRGAEVRIECLIDGVYDMAVVSHLAAKNYLKQEKVTLALN
LGRGSYVDGHQLIFCNERCNSDPHPTPEIRSRG
>Mature_192_residues
SKRFIKKEGLALVSMARYLIGERSGNRLKTIDDLSGDFGISVGVIQHALKVLEADGAIVVERRGRNGTRLLDLNMTLLLQ
QADLGNMVCAMPLPYTKLYEGLASGLKEQFTLLPLYFAHMRGAEVRIECLIDGVYDMAVVSHLAAKNYLKQEKVTLALNL
GRGSYVDGHQLIFCNERCNSDPHPTPEIRSRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994934, Length=173, Percent_Identity=60.6936416184971, Blast_Score=222, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21406; Mature: 21275

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRFIKKEGLALVSMARYLIGERSGNRLKTIDDLSGDFGISVGVIQHALKVLEADGAIV
CCCCHHHHCCHHHHHHHHHHHCCCCCCEECCHHHCCCCCCCHHHHHHHHHHHHCCCCEEE
VERRGRNGTRLLDLNMTLLLQQADLGNMVCAMPLPYTKLYEGLASGLKEQFTLLPLYFAH
EEECCCCCCEEEEECEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MRGAEVRIECLIDGVYDMAVVSHLAAKNYLKQEKVTLALNLGRGSYVDGHQLIFCNERCN
HCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCEEEEECCCCC
SDPHPTPEIRSRG
CCCCCCCCCCCCC
>Mature Secondary Structure 
SKRFIKKEGLALVSMARYLIGERSGNRLKTIDDLSGDFGISVGVIQHALKVLEADGAIV
CCCHHHHCCHHHHHHHHHHHCCCCCCEECCHHHCCCCCCCHHHHHHHHHHHHCCCCEEE
VERRGRNGTRLLDLNMTLLLQQADLGNMVCAMPLPYTKLYEGLASGLKEQFTLLPLYFAH
EEECCCCCCEEEEECEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MRGAEVRIECLIDGVYDMAVVSHLAAKNYLKQEKVTLALNLGRGSYVDGHQLIFCNERCN
HCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCEEEEECCCCC
SDPHPTPEIRSRG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]