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The map label for this gene is yafU [C]

Identifier: 162419524

GI number: 162419524

Start: 418236

End: 418871

Strand: Direct

Name: yafU [C]

Synonym: YpAngola_A0405

Alternate gene names: 162419524

Gene position: 418236-418871 (Clockwise)

Preceding gene: 162421582

Following gene: 162420186

Centisome position: 9.29

GC content: 41.04

Gene sequence:

>636_bases
GTGTTTTCCGTTACCGATCCTATTTCTGCTTATGCCGGAAATATCTACGACTCACGGGGAGTCTATGATGTTATCCGAGA
ATTTAAGCGATTCAGCATCACCGCGACAGAGTATGTGGGCGAGAATGGGCGTAAGTATATTCACATTTCTGGTTATGCCG
GCCTTAGGCGTATTATCACTGGAACCCGTTATGGTGCCAGCCACCCACAAATGCTATCAATGGGAATCGGCCAGCAAGGT
CTCAGTTCCAATATTGTTAAAGGTCTAAAATTCTGTATTCTCTTTTCTATTGGCTATCGAACGATTGAAGGTATCTTTAA
AGATGAATATACCTTAGCGGAATTTATCGGCAATATAACGATGGATATGGCTAAAATAGCCATTGTCGCGGCGACTTCTT
TTATTGTAGGTGTACTCTTCACTGCGACAGTTCTTGCAGGTGGCAGTATTATTGTCGTTGCTGGGGTAGCTTTTGCCGTT
GGCTTTGTAGCTACCGCTATCCTAGATCATTTCGATGAAAAGTATGGTATAAGTGAAAAATTAATCGCATTATTAACCAA
AGAAATGAGAAAAAAACCAAGAACACAAGAAGCAAACTTTCAGTCTATTCTTAATGGATTAGGGCGACTTAAATGA

Upstream 100 bases:

>100_bases
TTTCGTCCATAATTTGCCTGTCTCCGTTGTTGGAGTGAAGATATCAAAAACAGGCAATTACACAATATTGTTTACAGTCT
CTACTAATCCTGTGGCGCGG

Downstream 100 bases:

>100_bases
ATAATAGATTATTTAAAACATTAGGTGCAATCATAGCATTATTAATATTTACGCCAAGGATATATTTAGTGAGCACTTAC
ATCATTTCATTAATAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQQG
LSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVAFAV
GFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK

Sequences:

>Translated_211_residues
MFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQQG
LSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVAFAV
GFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK
>Mature_211_residues
MFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQQG
LSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVAFAV
GFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23046; Mature: 23046

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIIT
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCHHHHHHHHH
GTRYGASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNIT
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
MDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVAFAVGFVATAILDHFDEKYGISEK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
LIALLTKEMRKKPRTQEANFQSILNGLGRLK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIIT
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCHHHHHHHHH
GTRYGASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNIT
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
MDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVAFAVGFVATAILDHFDEKYGISEK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
LIALLTKEMRKKPRTQEANFQSILNGLGRLK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA