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The map label for this gene is yjaH [H]

Identifier: 162418639

GI number: 162418639

Start: 483701

End: 484360

Strand: Direct

Name: yjaH [H]

Synonym: YpAngola_A0463

Alternate gene names: 162418639

Gene position: 483701-484360 (Clockwise)

Preceding gene: 162418414

Following gene: 162419567

Centisome position: 10.74

GC content: 52.88

Gene sequence:

>660_bases
TTGTTTATGCAGCGGGTGCTGATAACCTTCGGATTAACCTTGGGTCTCAGCGCCTGTAGCAGCCTGTCAGATCCCCCTCA
ATTCAGTGCCAGCGGGTATATCGCCGATAGCGGTGTTGTTCGTTTATGGCGTCAGGATAATGCGCAGCAGCAACCCCAGG
TGTTGATGAGCGTTTACAGTCCCTACTTCGGGGGCAATACCCGAGTGACCTTCTACGAGTACCAGAATGGCATTTTACGG
GAAATCCGTCGCAATGATTTAGGCGCTACCCCACAGAGTGTCCAGTTGCGTTTCGATGAGCAAGGGCAGGTTAGCTTTAT
GCAACGCCAGCTCGCATCGCGTCGTGAGTCGCTCTCTGCTGATGATATAGCGGTTTATCAGTTGGAAGCTAAACGCATTT
TGGAACTCAGTCGTGTGCTACGTGCGGGTGACGTAAGGTTAATTCAGGGGCGTTGGCAGGATGGCATGCTTACTACCTGT
GCAGGTAAAACGTTGCGTCTGAATCTGGATGATAATTCGCAGGCATGGCTGACAACGCGGGGTGAGAAGAACACGCAGCC
TCTTGGTGTCGCATGGCTGGATTCATCTGAAGGGCAACAACTTCTGCTGGTCGCGAATCAGGACTTCTGCCGTTGGGAAC
CTCAGGCAGGCAGCCTGTAA

Upstream 100 bases:

>100_bases
GCTAATGTACCCGCGTTTGTTTCTGGTAAGGCACTGAAAGACGCTGTTAAGTCATAGTGTGTCAGTAAAAATAATAAGCA
GGGGGGGGATAAAACCCCTT

Downstream 100 bases:

>100_bases
GTTACCGATGAGCTATAAGTTAACCAATGACCTATAAGCTGCTGGTTATCAGCGGTGCAGCGTCATAAGATAGCCAGTAA
TCGATTATGATCCGCAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MFMQRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPYFGGNTRVTFYEYQNGILR
EIRRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTC
AGKTLRLNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL

Sequences:

>Translated_219_residues
MFMQRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPYFGGNTRVTFYEYQNGILR
EIRRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTC
AGKTLRLNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL
>Mature_219_residues
MFMQRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPYFGGNTRVTFYEYQNGILR
EIRRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTC
AGKTLRLNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790434, Length=220, Percent_Identity=40, Blast_Score=161, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010858
- InterPro:   IPR012640
- InterPro:   IPR016500 [H]

Pfam domain/function: PF07356 DUF1481; PF08139 VirB [H]

EC number: NA

Molecular weight: Translated: 24673; Mature: 24673

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMQRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYS
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHC
PYFGGNTRVTFYEYQNGILREIRRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSA
CCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC
DDIAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTCAGKTLRLNLDDNSQAWLTTR
CCEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEC
GEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL
CCCCCCCEEEEEECCCCCCEEEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MFMQRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYS
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHC
PYFGGNTRVTFYEYQNGILREIRRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSA
CCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC
DDIAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTCAGKTLRLNLDDNSQAWLTTR
CCEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEC
GEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL
CCCCCCCEEEEEECCCCCCEEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]