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The map label for this gene is ytbI [H]

Identifier: 162418121

GI number: 162418121

Start: 193174

End: 193701

Strand: Direct

Name: ytbI [H]

Synonym: YpAngola_A0183

Alternate gene names: 162418121

Gene position: 193174-193701 (Clockwise)

Preceding gene: 162418820

Following gene: 162419886

Centisome position: 4.29

GC content: 41.1

Gene sequence:

>528_bases
ATGGAGTTTGATGAATATGATAATTCGGATACACGCTATCTCCTTGGTATTTACCAAGGTCAACTAATCTGCAGTGTGCG
TTTTATAGAACTTCACCTGCCTAATATGATCACTCATACCTTCAATGCACTCTTCGATGACGTGGCATTACCTAAGAGGG
GCTATATAGAATCGAGCCGTTTCTTCGTTGATAAAACCCGTGCCAAGTTGCTTTTTGGTAACCATTACCCCATAAGCTAC
TTATTCTTTTTATCGATTATTAATTACTCCCGACATAATGGCTACACAGGTATTTATACTATCGTCAGCCGAGCAATGTT
GACCATCCTTAAACGATCAGGCTGGCAGGTTGAGGTGATTAAAGAAGCACATATTACCGAAAAAGAAAGGATATACTTAC
TGCATCTCCCGATAGATCGGGACAATCAAGCACGGCTGCTTTTACAGGTTAATCAGCGTTTGCAGGATCCATGTTCAGTA
TTAAGTACATGGCCTATATCGTTGCCCGTTATGCCAGAATCGGCTTAA

Upstream 100 bases:

>100_bases
ATACGACGAGTTGACCGATATACGGTCTGAGGACCTGTATAAATTAAGGAAAAAGACGTTTAAGGATCGTCTTAACTGGG
AGGTGAATTGCAGCAACGGC

Downstream 100 bases:

>100_bases
TAATTTCCAGTTCAACACCAAGCCCGATTGCCTGTTTTGCGTTAATTACACCCAACTTTTTTACCACATTTCCTATGTGA
TATTTTACTGTTCTGGGGGT

Product: N-acylhomoserine lactone synthase YtbI

Products: NA

Alternate protein names: Autoinducer synthesis protein yukI [H]

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MEFDEYDNSDTRYLLGIYQGQLICSVRFIELHLPNMITHTFNALFDDVALPKRGYIESSRFFVDKTRAKLLFGNHYPISY
LFFLSIINYSRHNGYTGIYTIVSRAMLTILKRSGWQVEVIKEAHITEKERIYLLHLPIDRDNQARLLLQVNQRLQDPCSV
LSTWPISLPVMPESA

Sequences:

>Translated_175_residues
MEFDEYDNSDTRYLLGIYQGQLICSVRFIELHLPNMITHTFNALFDDVALPKRGYIESSRFFVDKTRAKLLFGNHYPISY
LFFLSIINYSRHNGYTGIYTIVSRAMLTILKRSGWQVEVIKEAHITEKERIYLLHLPIDRDNQARLLLQVNQRLQDPCSV
LSTWPISLPVMPESA
>Mature_175_residues
MEFDEYDNSDTRYLLGIYQGQLICSVRFIELHLPNMITHTFNALFDDVALPKRGYIESSRFFVDKTRAKLLFGNHYPISY
LFFLSIINYSRHNGYTGIYTIVSRAMLTILKRSGWQVEVIKEAHITEKERIYLLHLPIDRDNQARLLLQVNQRLQDPCSV
LSTWPISLPVMPESA

Specific function: Required for the synthesis of an acyl-HSL autoinducer that binds to yukR and which is involved in the regulation of motility and morphology [H]

COG id: COG3916

COG function: function code TQ; N-acyl-L-homoserine lactone synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the autoinducer synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR001690
- InterPro:   IPR018311 [H]

Pfam domain/function: PF00765 Autoind_synth [H]

EC number: =2.3.1.184 [H]

Molecular weight: Translated: 20460; Mature: 20460

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFDEYDNSDTRYLLGIYQGQLICSVRFIELHLPNMITHTFNALFDDVALPKRGYIESSR
CCCCCCCCCCCEEEEEEECCEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCE
FFVDKTRAKLLFGNHYPISYLFFLSIINYSRHNGYTGIYTIVSRAMLTILKRSGWQVEVI
EEEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
KEAHITEKERIYLLHLPIDRDNQARLLLQVNQRLQDPCSVLSTWPISLPVMPESA
ECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCC
>Mature Secondary Structure
MEFDEYDNSDTRYLLGIYQGQLICSVRFIELHLPNMITHTFNALFDDVALPKRGYIESSR
CCCCCCCCCCCEEEEEEECCEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCE
FFVDKTRAKLLFGNHYPISYLFFLSIINYSRHNGYTGIYTIVSRAMLTILKRSGWQVEVI
EEEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
KEAHITEKERIYLLHLPIDRDNQARLLLQVNQRLQDPCSVLSTWPISLPVMPESA
ECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA