Click here to switch to the map view.

The map label for this gene is 162149624

Identifier: 162149624

GI number: 162149624

Start: 3942613

End: 3943956

Strand: Direct

Name: 162149624

Synonym: GDI_3864

Alternate gene names: NA

Gene position: 3942613-3943956 (Clockwise)

Preceding gene: 162149623

Following gene: NA

Centisome position: 99.96

GC content: 62.28

Gene sequence:

>1344_bases
ATGAGCAGCTTCATTCCGTTTGATCGATCGCAGCCGTATCTTCTGCCGCCGGATCTGAAGTCATGGCTGCCGTCGGACGA
TGTGGCGCATTTCATCGTGGCGGCGGTAGAGCGGGTGCCGTTGAGGGCATTTTCCGTTCCTGTGCGGACTGGCGGCAAGG
CGCAGTATCATCCGCGCCTGATGCTGGCGCTGCTGATTTACGCCTATGCGAACGGCGTGTTCTCATCGCGTCGGATCGAA
CGGGCGACATATCGTGATATCGGTATGCGCTTTGTGGCGGCGAACCTGCATCCTGACCATGACACGATCGCGACGTTCCG
GCGCGGCAACCGCACGGCGATCGAGGCAGCGTTCATGCATGTACTCCTGCTGGCACGCGAGACGGGACTGGTGCGGCTTG
GCACGGTGTCGATCGACGGCACGAAGATCGATGCCAATGCCTCGAAATACCGTTCCATTCGTTATGATCGCGCGAAAGAG
CTGCGCGAGAAACTGGCCACCGATATCTCCACCCTGATGGAACGGGCAGAGGCGGCGGATACAACCGATGTGGATCATCA
GGCGTTGCCGGAGGAACTGGCCCGGCGGGAGGCTCTGAAGGCAAAGCTGGATGAAGCCTGTGCGCGACTGGAGGCGGAAG
CCCGCGAGCAGGCCAAGACCGCCCGACCAGAATATGAGCGCAAGAAGGCAGCTTTTGATGCGAAGCGGGGACGGCGCGGT
CGGCCGCCGAAAGAACCGGACGATGAACCGCCACCAGACCGGCAGATCAACCTGACCGATCCGGACAGCAAGCTGATGCG
CCGCTCCGACGCGCATGAATACCGGCAAGCCTACAATGCCCAGGCCGTGGTTTGTGCCGAGGGCAGCCAGTTGATCTTGG
AAAATGGCGTCGTTGCGACGACGGCGGACGCGCCCAGCTTCGCCGCCACCATCCTGGGTATGGAGGAGAGGATCGGCCTG
CCACGAACCGTCCTCGCCGACACGGGTTTCGCCAGCGGCAAAGCCGTCGAAACGTTGCAGGCCAGCGGCGTGGACCCGCT
GGTCGCCATCGGACGCCCTGTGAATCGGCGCCCTTATGACTTCCGGCCAGAACCGCCACCCAGGGAGCCGCGCCGGATCA
CCGAGCCCTGGCGCCTGGAAATGAAGGCCAGGCTGCAACAGAACCCGGCAAAAGCCCTTTACGCCTTACGCAAGCAGACC
GTCGAACCGGTCTTCGGTATCATCAAGAGCGCCATGGGCTTCACCCGTTTCCATCTCCGTGGCCTCCCCAACGTCGCAAC
AGAATGGACGCTCGTCGCCCTCGCATATAATTGCCGTAGGATCACGCGACTGACGGCCGCATAA

Upstream 100 bases:

>100_bases
CTCACCCGAAGAAACGCTCATCCATGACTTTCCAAACAGGCTCTTAGCAGGCTGTCGGGTTGGGGTACCTGGCTCTGGCG
ATCTGCGGTAAGCTTTCAGG

Downstream 100 bases:

>100_bases
ACGCCGTCGTCGCCATCACTCATCACTACGACAGCGCCCAATCCGACAGCCTGCTTAGAGCCCGATCCGAAAGTTCTTCA
ACCGTGACAATGCCTTGCTG

Product: transposase

Products: NA

Alternate protein names: Transposase; IS4 Family Transposase; ISPsy6 Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; ISCps6 Transposase; Transglycosylase Domain-Containing Protein; ISNCY Family Transposase; ISCpe5 Transposase; ISPpu20 Transposase; ISKpn6-Like Transposase; Transposase Is4 Family

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSSFIPFDRSQPYLLPPDLKSWLPSDDVAHFIVAAVERVPLRAFSVPVRTGGKAQYHPRLMLALLIYAYANGVFSSRRIE
RATYRDIGMRFVAANLHPDHDTIATFRRGNRTAIEAAFMHVLLLARETGLVRLGTVSIDGTKIDANASKYRSIRYDRAKE
LREKLATDISTLMERAEAADTTDVDHQALPEELARREALKAKLDEACARLEAEAREQAKTARPEYERKKAAFDAKRGRRG
RPPKEPDDEPPPDRQINLTDPDSKLMRRSDAHEYRQAYNAQAVVCAEGSQLILENGVVATTADAPSFAATILGMEERIGL
PRTVLADTGFASGKAVETLQASGVDPLVAIGRPVNRRPYDFRPEPPPREPRRITEPWRLEMKARLQQNPAKALYALRKQT
VEPVFGIIKSAMGFTRFHLRGLPNVATEWTLVALAYNCRRITRLTAA

Sequences:

>Translated_447_residues
MSSFIPFDRSQPYLLPPDLKSWLPSDDVAHFIVAAVERVPLRAFSVPVRTGGKAQYHPRLMLALLIYAYANGVFSSRRIE
RATYRDIGMRFVAANLHPDHDTIATFRRGNRTAIEAAFMHVLLLARETGLVRLGTVSIDGTKIDANASKYRSIRYDRAKE
LREKLATDISTLMERAEAADTTDVDHQALPEELARREALKAKLDEACARLEAEAREQAKTARPEYERKKAAFDAKRGRRG
RPPKEPDDEPPPDRQINLTDPDSKLMRRSDAHEYRQAYNAQAVVCAEGSQLILENGVVATTADAPSFAATILGMEERIGL
PRTVLADTGFASGKAVETLQASGVDPLVAIGRPVNRRPYDFRPEPPPREPRRITEPWRLEMKARLQQNPAKALYALRKQT
VEPVFGIIKSAMGFTRFHLRGLPNVATEWTLVALAYNCRRITRLTAA
>Mature_446_residues
SSFIPFDRSQPYLLPPDLKSWLPSDDVAHFIVAAVERVPLRAFSVPVRTGGKAQYHPRLMLALLIYAYANGVFSSRRIER
ATYRDIGMRFVAANLHPDHDTIATFRRGNRTAIEAAFMHVLLLARETGLVRLGTVSIDGTKIDANASKYRSIRYDRAKEL
REKLATDISTLMERAEAADTTDVDHQALPEELARREALKAKLDEACARLEAEAREQAKTARPEYERKKAAFDAKRGRRGR
PPKEPDDEPPPDRQINLTDPDSKLMRRSDAHEYRQAYNAQAVVCAEGSQLILENGVVATTADAPSFAATILGMEERIGLP
RTVLADTGFASGKAVETLQASGVDPLVAIGRPVNRRPYDFRPEPPPREPRRITEPWRLEMKARLQQNPAKALYALRKQTV
EPVFGIIKSAMGFTRFHLRGLPNVATEWTLVALAYNCRRITRLTAA

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50089; Mature: 49958

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFIPFDRSQPYLLPPDLKSWLPSDDVAHFIVAAVERVPLRAFSVPVRTGGKAQYHPRL
CCCCCCCCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCHHH
MLALLIYAYANGVFSSRRIERATYRDIGMRFVAANLHPDHDTIATFRRGNRTAIEAAFMH
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHH
VLLLARETGLVRLGTVSIDGTKIDANASKYRSIRYDRAKELREKLATDISTLMERAEAAD
HHHHHHCCCEEEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TTDVDHQALPEELARREALKAKLDEACARLEAEAREQAKTARPEYERKKAAFDAKRGRRG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
RPPKEPDDEPPPDRQINLTDPDSKLMRRSDAHEYRQAYNAQAVVCAEGSQLILENGVVAT
CCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCEEEE
TADAPSFAATILGMEERIGLPRTVLADTGFASGKAVETLQASGVDPLVAIGRPVNRRPYD
ECCCCHHHHHHHCHHHHCCCCHHHHHCCCCCCCCHHHHHHHCCCCHHHHCCCCCCCCCCC
FRPEPPPREPRRITEPWRLEMKARLQQNPAKALYALRKQTVEPVFGIIKSAMGFTRFHLR
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLPNVATEWTLVALAYNCRRITRLTAA
CCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSFIPFDRSQPYLLPPDLKSWLPSDDVAHFIVAAVERVPLRAFSVPVRTGGKAQYHPRL
CCCCCCCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCHHH
MLALLIYAYANGVFSSRRIERATYRDIGMRFVAANLHPDHDTIATFRRGNRTAIEAAFMH
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHH
VLLLARETGLVRLGTVSIDGTKIDANASKYRSIRYDRAKELREKLATDISTLMERAEAAD
HHHHHHCCCEEEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TTDVDHQALPEELARREALKAKLDEACARLEAEAREQAKTARPEYERKKAAFDAKRGRRG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
RPPKEPDDEPPPDRQINLTDPDSKLMRRSDAHEYRQAYNAQAVVCAEGSQLILENGVVAT
CCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCEEEE
TADAPSFAATILGMEERIGLPRTVLADTGFASGKAVETLQASGVDPLVAIGRPVNRRPYD
ECCCCHHHHHHHCHHHHCCCCHHHHHCCCCCCCCHHHHHHHCCCCHHHHCCCCCCCCCCC
FRPEPPPREPRRITEPWRLEMKARLQQNPAKALYALRKQTVEPVFGIIKSAMGFTRFHLR
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLPNVATEWTLVALAYNCRRITRLTAA
CCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA