Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is 162149423
Identifier: 162149423
GI number: 162149423
Start: 3735716
End: 3738250
Strand: Direct
Name: 162149423
Synonym: GDI_3661
Alternate gene names: NA
Gene position: 3735716-3738250 (Clockwise)
Preceding gene: 162149422
Following gene: 162149424
Centisome position: 94.72
GC content: 74.4
Gene sequence:
>2535_bases GTGCGGAATGTTGAGGCGATGATTCCCTTCGACGCGATCAATGACGCGGCGCTGGCGCAGTGGCCGGTGCTGGTGGCGCG CTGGCTGCCGGCGGGGCGGCGGCGCGGCGACGAATGGGTGGTCGGCGGGCTGGACAACGCGCCGGGGCGGTCGCTGTCGA TCAACCTGCGCACCGGGCGGTGGGCCGATTTCGCCGGCGGGCCGCGCGGCGGCGACCCGATCAGCCTGTATGCCGCGCTG CATGCGCGCGACGACCGGGTGCGGGCGGCGCGGGACCTGGGGCGGATGCTGGGGGTGACCGGCGGGATGGAGGCGGCCGA GCCGGTTTCCGACCCCTTGCCCGACTGGGTGCCCGGGGTGCCGCCGGCTGGCGCGCCGATGCCCGACCTGCGCGGGTGGG ACCATGTCTATGCCTATCGCGACGTGTCGGGGCGGGTGGTGCGCTATGTGCTGCGGCGCGATGCCACCGCGCAGGAGCGC AAGCGGATCATGCCGCTGACCTGGGGCATGCTGCGCGAGGGCGGGGAGGCCCGCGCCGGCTGGCATCCGCGCCACGCGGG GGCGCCCCGGTCGCTGTACGGGCTGGAGCGCGTGGTGCGGGCGCGGACCGTGCTGGTCTGCGAGGGCGAGAAGGCGGCGG ATGCCGCGCAGTGCCTGTTCCCGCGCATGGCCTGCGTGACCTGGACGGCGGGCACCGGCAATGTGGACAAGGCCGACTGG GGCCCCCTGGCCGGGCGGCACGTCATCATCTGGCCCGACCATGACGCGCCGGGCGAGAAGGCGGCGGCGGAGATCGCCGC CCTTCTGGCGCCCATCGCCGCGACCGTGCGCGTCATCGACGTCAGCGACATGGAGCCGGGCGAGGACGCCGCCGACCTGT GCGTGGTCGAGCCGCGGAACTGGCTGCGCGAGCGGGTGGGGCCGGTGCTGTGCGGCACCAGCGTCAAGCGCGCGGGCGGC GAGGCCGGGCGGCCGATGGAACGCCGCGTCGCGGCGCTGGAGCCCATCGCGGTACGGGGCGGCGAGATCGACCTGGTGGC CAGCGCGGGCGAGCGCGCGCTGATGGCCGCGAACGCCCCCATCTACCAGCGCGGCACCAGCCTGGCCCGGCCCGGCCGGC GCGAGGTCGCGGCGGCCGACGGGCGGCTGACCCAGGCGGCGTGCCTGGTCGAGGTGGGGGTGCATGCCCTGACCGACCTG CTGTGCCAGGCGGTGGAATGGCGCCGTTTCGACCGGCGCAGCCAGGCGTGGAAGGCGATCGACCCGCCGGCGGCGGCGGC GCAGGTGATTTTGAGCCGGGCCGGTACATGGCCGTTTCCCGTCATTGCCGGGGTGATCACCACCCCCACGCTGCGCCCCG ACGGGTCGGTGCTGATGGCGCCGGGATACGACCCGGCGACGCGGCTGTACCATGTGGACGACCCGACGCTGGAACTGTGC CTGCCCGAGCCCACGCGCGAGGCCGCCATGCGGGCTCTGGCGCGGCTGGAGGCGCTGCTGGCGGAATTTCCGTTCGTGGC CGAGGCCGACCGGTCGGTGGCGCTGGCCGGCATCCTGACCGCCGTGGTGCGGGGGATGATGCCGGTCAGCCCGCTGTTCG CCTTCCGCGCCAACGCGCCCGGGTCGGGCAAGAGCTTCCTGGTGGACCTGGCCAGCGTGATCGCGACCGGGCGCGTCTGC CCCGTGACCAGCGCGGGCGAGGACGTGGCGGAGATGGAAAAGCGCCTGACCGGGTTGCTGCTGGCGGGGTATCCGATCCT GTCGCTGGACAATGTGAACGAGGAACTGGGCGGCGACCTGCTGTGCCAGGCGACGGAACGCCCGATCGTGCGGCTGCGCG AGCTGGGGACGTCGTCCAGCGTCGAGATCGAGAACCGGGCGGTGATCTTCGCCACCGGCAACGCGCTGCGCGTGCGCGGC GACATGACGCGGCGCACGCTGGTCGCGACCCTGGATGCGGGGATCGAACAGCCGGAACTGCGGCGCTTCGCCCGCGATCC GGTCGCCGACATCATGGCCGACCGGGGTGGGTATGTCGCGGCCTGCCTGACGATCCTGCGGGCCTGGATGGGCAGCGGGG CGGCGCTGGACCTGCCGCCGCTGGCGTCGTTCGAGGGATGGAGCCGCACGGTGCGGGCCGCCCTGGTCTGGCTGGGCCGG GCCGATCCGTGCCTGAGCATGCAGGCCGCGCGCGAGGACGACCCCGAGCGCGGCGAACTGCGCGAGATCCTGGGCCTGCT GGCCCAGGCCGCCGGCACCGGCCGGCATTGCGGCCGCACGGTGCGCGAGATCGAGGAGCTGTCGGCGCTGGAAAGCACGG ACGCCGCCGGCTACCGCACCGGGCTGCGCCACCCGGAGCTGCGCGACGCGCTGGTGCGGATTGCCGGCACCCCGGCCGGC CGGATCAATTCCCGTCGGTTGGCCCGCTGGTTCCTGGCCCGCCGGGGGCGGGTGATCGAGGGCCTGCGCATCGCGGAATG CGGGATGGCCCATGGCGGGGTGAAGAAGTGGGCGGTGGAACGGGTCGTATCCTGA
Upstream 100 bases:
>100_bases CCGAAGCCGGCCCCGCCGCCGCTGATCGACCGGTCGTGCCTGAATTGCGGCGCCGGGTTCAGCGTGCGCTCGCCGTTCCT GCGGCTGTGTCCGACATGTC
Downstream 100 bases:
>100_bases AGAGATCCGGGGTGGGGAAAGGTGGGGACGGTGGGGCGGCGGCGGCCGGTACGGGGGAAGTGGCGCGGCCAGTCGGCCCG TACCGGGGGGATGAGACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 844; Mature: 844
Protein sequence:
>844_residues MRNVEAMIPFDAINDAALAQWPVLVARWLPAGRRRGDEWVVGGLDNAPGRSLSINLRTGRWADFAGGPRGGDPISLYAAL HARDDRVRAARDLGRMLGVTGGMEAAEPVSDPLPDWVPGVPPAGAPMPDLRGWDHVYAYRDVSGRVVRYVLRRDATAQER KRIMPLTWGMLREGGEARAGWHPRHAGAPRSLYGLERVVRARTVLVCEGEKAADAAQCLFPRMACVTWTAGTGNVDKADW GPLAGRHVIIWPDHDAPGEKAAAEIAALLAPIAATVRVIDVSDMEPGEDAADLCVVEPRNWLRERVGPVLCGTSVKRAGG EAGRPMERRVAALEPIAVRGGEIDLVASAGERALMAANAPIYQRGTSLARPGRREVAAADGRLTQAACLVEVGVHALTDL LCQAVEWRRFDRRSQAWKAIDPPAAAAQVILSRAGTWPFPVIAGVITTPTLRPDGSVLMAPGYDPATRLYHVDDPTLELC LPEPTREAAMRALARLEALLAEFPFVAEADRSVALAGILTAVVRGMMPVSPLFAFRANAPGSGKSFLVDLASVIATGRVC PVTSAGEDVAEMEKRLTGLLLAGYPILSLDNVNEELGGDLLCQATERPIVRLRELGTSSSVEIENRAVIFATGNALRVRG DMTRRTLVATLDAGIEQPELRRFARDPVADIMADRGGYVAACLTILRAWMGSGAALDLPPLASFEGWSRTVRAALVWLGR ADPCLSMQAAREDDPERGELREILGLLAQAAGTGRHCGRTVREIEELSALESTDAAGYRTGLRHPELRDALVRIAGTPAG RINSRRLARWFLARRGRVIEGLRIAECGMAHGGVKKWAVERVVS
Sequences:
>Translated_844_residues MRNVEAMIPFDAINDAALAQWPVLVARWLPAGRRRGDEWVVGGLDNAPGRSLSINLRTGRWADFAGGPRGGDPISLYAAL HARDDRVRAARDLGRMLGVTGGMEAAEPVSDPLPDWVPGVPPAGAPMPDLRGWDHVYAYRDVSGRVVRYVLRRDATAQER KRIMPLTWGMLREGGEARAGWHPRHAGAPRSLYGLERVVRARTVLVCEGEKAADAAQCLFPRMACVTWTAGTGNVDKADW GPLAGRHVIIWPDHDAPGEKAAAEIAALLAPIAATVRVIDVSDMEPGEDAADLCVVEPRNWLRERVGPVLCGTSVKRAGG EAGRPMERRVAALEPIAVRGGEIDLVASAGERALMAANAPIYQRGTSLARPGRREVAAADGRLTQAACLVEVGVHALTDL LCQAVEWRRFDRRSQAWKAIDPPAAAAQVILSRAGTWPFPVIAGVITTPTLRPDGSVLMAPGYDPATRLYHVDDPTLELC LPEPTREAAMRALARLEALLAEFPFVAEADRSVALAGILTAVVRGMMPVSPLFAFRANAPGSGKSFLVDLASVIATGRVC PVTSAGEDVAEMEKRLTGLLLAGYPILSLDNVNEELGGDLLCQATERPIVRLRELGTSSSVEIENRAVIFATGNALRVRG DMTRRTLVATLDAGIEQPELRRFARDPVADIMADRGGYVAACLTILRAWMGSGAALDLPPLASFEGWSRTVRAALVWLGR ADPCLSMQAAREDDPERGELREILGLLAQAAGTGRHCGRTVREIEELSALESTDAAGYRTGLRHPELRDALVRIAGTPAG RINSRRLARWFLARRGRVIEGLRIAECGMAHGGVKKWAVERVVS >Mature_844_residues MRNVEAMIPFDAINDAALAQWPVLVARWLPAGRRRGDEWVVGGLDNAPGRSLSINLRTGRWADFAGGPRGGDPISLYAAL HARDDRVRAARDLGRMLGVTGGMEAAEPVSDPLPDWVPGVPPAGAPMPDLRGWDHVYAYRDVSGRVVRYVLRRDATAQER KRIMPLTWGMLREGGEARAGWHPRHAGAPRSLYGLERVVRARTVLVCEGEKAADAAQCLFPRMACVTWTAGTGNVDKADW GPLAGRHVIIWPDHDAPGEKAAAEIAALLAPIAATVRVIDVSDMEPGEDAADLCVVEPRNWLRERVGPVLCGTSVKRAGG EAGRPMERRVAALEPIAVRGGEIDLVASAGERALMAANAPIYQRGTSLARPGRREVAAADGRLTQAACLVEVGVHALTDL LCQAVEWRRFDRRSQAWKAIDPPAAAAQVILSRAGTWPFPVIAGVITTPTLRPDGSVLMAPGYDPATRLYHVDDPTLELC LPEPTREAAMRALARLEALLAEFPFVAEADRSVALAGILTAVVRGMMPVSPLFAFRANAPGSGKSFLVDLASVIATGRVC PVTSAGEDVAEMEKRLTGLLLAGYPILSLDNVNEELGGDLLCQATERPIVRLRELGTSSSVEIENRAVIFATGNALRVRG DMTRRTLVATLDAGIEQPELRRFARDPVADIMADRGGYVAACLTILRAWMGSGAALDLPPLASFEGWSRTVRAALVWLGR ADPCLSMQAAREDDPERGELREILGLLAQAAGTGRHCGRTVREIEELSALESTDAAGYRTGLRHPELRDALVRIAGTPAG RINSRRLARWFLARRGRVIEGLRIAECGMAHGGVKKWAVERVVS
Specific function: Unknown
COG id: COG0358
COG function: function code L; DNA primase (bacterial type)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90894; Mature: 90894
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVEAMIPFDAINDAALAQWPVLVARWLPAGRRRGDEWVVGGLDNAPGRSLSINLRTGR CCCCCEECCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEECCC WADFAGGPRGGDPISLYAALHARDDRVRAARDLGRMLGVTGGMEAAEPVSDPLPDWVPGV CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PPAGAPMPDLRGWDHVYAYRDVSGRVVRYVLRRDATAQERKRIMPLTWGMLREGGEARAG CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCCCCCCC WHPRHAGAPRSLYGLERVVRARTVLVCEGEKAADAAQCLFPRMACVTWTAGTGNVDKADW CCCCCCCCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCC GPLAGRHVIIWPDHDAPGEKAAAEIAALLAPIAATVRVIDVSDMEPGEDAADLCVVEPRN CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEECCHH WLRERVGPVLCGTSVKRAGGEAGRPMERRVAALEPIAVRGGEIDLVASAGERALMAANAP HHHHHCCCEEECCCHHHCCCCCCCCHHHHHHHHCCEEECCCCEEEEECCCCCEEEECCCC IYQRGTSLARPGRREVAAADGRLTQAACLVEVGVHALTDLLCQAVEWRRFDRRSQAWKAI HHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPPAAAAQVILSRAGTWPFPVIAGVITTPTLRPDGSVLMAPGYDPATRLYHVDDPTLELC CCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHEEEECCCCCEEEE LPEPTREAAMRALARLEALLAEFPFVAEADRSVALAGILTAVVRGMMPVSPLFAFRANAP CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHEECCCC GSGKSFLVDLASVIATGRVCPVTSAGEDVAEMEKRLTGLLLAGYPILSLDNVNEELGGDL CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCE LCQATERPIVRLRELGTSSSVEIENRAVIFATGNALRVRGDMTRRTLVATLDAGIEQPEL EECCCCCHHHHHHHCCCCCCEEECCCEEEEEECCEEEEECCHHHHHHHHHHHCCCCCHHH RRFARDPVADIMADRGGYVAACLTILRAWMGSGAALDLPPLASFEGWSRTVRAALVWLGR HHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHCC ADPCLSMQAAREDDPERGELREILGLLAQAAGTGRHCGRTVREIEELSALESTDAAGYRT CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHC GLRHPELRDALVRIAGTPAGRINSRRLARWFLARRGRVIEGLRIAECGMAHGGVKKWAVE CCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHCCCCHHHCCCCCCCHHHHHHH RVVS HHCC >Mature Secondary Structure MRNVEAMIPFDAINDAALAQWPVLVARWLPAGRRRGDEWVVGGLDNAPGRSLSINLRTGR CCCCCEECCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEECCC WADFAGGPRGGDPISLYAALHARDDRVRAARDLGRMLGVTGGMEAAEPVSDPLPDWVPGV CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PPAGAPMPDLRGWDHVYAYRDVSGRVVRYVLRRDATAQERKRIMPLTWGMLREGGEARAG CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCCCCCCC WHPRHAGAPRSLYGLERVVRARTVLVCEGEKAADAAQCLFPRMACVTWTAGTGNVDKADW CCCCCCCCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCC GPLAGRHVIIWPDHDAPGEKAAAEIAALLAPIAATVRVIDVSDMEPGEDAADLCVVEPRN CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEECCHH WLRERVGPVLCGTSVKRAGGEAGRPMERRVAALEPIAVRGGEIDLVASAGERALMAANAP HHHHHCCCEEECCCHHHCCCCCCCCHHHHHHHHCCEEECCCCEEEEECCCCCEEEECCCC IYQRGTSLARPGRREVAAADGRLTQAACLVEVGVHALTDLLCQAVEWRRFDRRSQAWKAI HHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPPAAAAQVILSRAGTWPFPVIAGVITTPTLRPDGSVLMAPGYDPATRLYHVDDPTLELC CCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHEEEECCCCCEEEE LPEPTREAAMRALARLEALLAEFPFVAEADRSVALAGILTAVVRGMMPVSPLFAFRANAP CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHEECCCC GSGKSFLVDLASVIATGRVCPVTSAGEDVAEMEKRLTGLLLAGYPILSLDNVNEELGGDL CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCE LCQATERPIVRLRELGTSSSVEIENRAVIFATGNALRVRGDMTRRTLVATLDAGIEQPEL EECCCCCHHHHHHHCCCCCCEEECCCEEEEEECCEEEEECCHHHHHHHHHHHCCCCCHHH RRFARDPVADIMADRGGYVAACLTILRAWMGSGAALDLPPLASFEGWSRTVRAALVWLGR HHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHCC ADPCLSMQAAREDDPERGELREILGLLAQAAGTGRHCGRTVREIEELSALESTDAAGYRT CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHC GLRHPELRDALVRIAGTPAGRINSRRLARWFLARRGRVIEGLRIAECGMAHGGVKKWAVE CCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHCCCCHHHCCCCCCCHHHHHHH RVVS HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA