Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
---|---|
Accession | NC_010125 |
Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is 162149371
Identifier: 162149371
GI number: 162149371
Start: 3687352
End: 3689598
Strand: Direct
Name: 162149371
Synonym: GDI_3605
Alternate gene names: NA
Gene position: 3687352-3689598 (Clockwise)
Preceding gene: 162149370
Following gene: 162149374
Centisome position: 93.49
GC content: 64.84
Gene sequence:
>2247_bases ATGACTGCGATGTCTGATAATCCCTTCGAAGCTTACGTCTATGACCCCATGCCGGTCATCAAGGCCAACAATGAGGCAGA GACTGCGGCGGCAGCCATCAGGCAGTCGAACCAGGAGACGGCGGCCAAGCAGATCGCGAATCAGCAGAACATGCTGATGC TCGCAGCCCGCCAGCAGGCCATGGCGGTTCCTGGGATGCAGGGCGCATCGCAGCCGAATGCGCTGGCGTCCTATGCACCA CAGGCCGGCGCTCCCCAAGGGGCTGGGCAAAATCCCCTGGCGCAGGTGGCTGCACAGCAAGGCGCTCCAGGGGCGCAGTC GGGACAGCAGCCCGGTTCGTCCTACACTGGCAATCCTCTGGGCATGGTCGGCGCCAAGGCGGATGACAATGGCGTCATGA TCGGGCCTGCCGGAACGGTTCATTTCCCCAGCTATGGCGGCCGAGAGGTCGATGGCTTGTCCCTGCCGCAAGACCAGTAC TGGGGCGCCATGTCGCAGGCAGACTTCGGGAAAGCCTTGAACGACGCCGGCACCGCGCGCGATCACCGCAATTATCAGCG GGCGGCACAGGCCAATACGGATGGCGCCTGGAACGCCGCGATCGCTGACGGAGTGAAGGCCGGTGACATCTCTCCATCCA TGGGGGAACGGCTCTATAATCGACCGGAATACCGGGCGATGATCCTGAAGTCTTACGCCGGGCCCGATTCCGCGCTGTCG TATAGCGCGGGCCTGACCCGCGATGGGATGCGCGAGGACACAACGACCGGAACGCCCGTGGCAGCGCCGGACATCGTCGC GGCCCAGGCGGCGCAGAAGGGTACGGTGGCCGGAGCGGAAGCGCGGGCGCGGGGGGACCTGGATACCACCTCCCTGACCG TGAAGAACAAGGACGGCACCTATTCGCCGCAGACCATGACCAAGAGCCAGGCGGCCGATTATCTGCGCGGGCAACCCGGC GCCGCGCCGTCATATTCGGCAGCGATCACCGGGTGGGAGAATGCCGGGGGCAATCCGGCTCAGGCCAACACAAGCGGGCC CGGGGGAACCTCGACATCAACGGCGGTCGGCAATGGTCAGTTCACGCGGGCAGGCTGGATTCAGGATGTCCGCGAAATGC GGCCCGATCTGGCGAAGGGCAAGACGGATGCCGAGATCGCGGCCCTACGGACCGATCCGCAGATCAGCGGTCAGATGATC GAGGCCCGCGCCGGCCGCAATTCTCAGCGGTTTTCCGAGCTTGGCGTGCCGGCGAACGCGCCCACCCTGGCGCTGGCCCA TCGCTATGGCGCCGATGGCGCGGCCGCGATCCTGCGCGCCTCGCAGCAGAATCCGGGCCTGACGTTGCAGCAGGTGCTGC CGGCGGCAGCACAGAAGAACCCGGCGCTGGCCAGCCTGACGGTCGGGGGCATCGTTGGCGATGCCGGCCGCCGATTCATG ATGGTGCAGGCGCCTGGCCAGCAGCCGTCGGGTGGCCCGGCCGGAAGTCCCGATCAGGCGGCGGCCGCCGGGCAGGATGG CGGCGCCGCGATGCCGGGGATTGCCGGGATGCCGCAGCTTACGCCGCAGGCGCAGAAGGACCTGGAGATCGCGACAGCCC GGACCAAGGCGCAGAATGACGCGGATATCGGCTTGATGAAGGATTACCGGTCTGACCTGACGAAGCAGTCCAAGGCGGCG CAGAGCCAGAACTTCCTCATCGATCAGATGAAGGACGAAATGCCTGGCTGGACATCAGGGCCGAACGCGGCGTCTGTCGG GAAGATGAATGCGGTGCTGGACGATATTTCCCAGCGCCTGGGGTATGGCAAGCCTGACCCCGGCCTCGGTCGCTATCAGG ATTTCGTCAAGAACGAGAAACAGGTTCTTTCAGCAGCGGTTCATATGAACAATCAGGCTGGTGGCTTCCACATCACGCAA GCGATGGAAAGTGGCAGCCCCAACGCCTCGATGTCGCCTACGGCCCTTCGTGACATGTTCTCGCAGATGCAGGGCATGAA CGACTGGCTGATGGCGAAGGAGCGCGCGGCATCGAAATTCACCGGAAAGTCGGATGATTTCGACAGCGACTGGAACACCG CCGTCTCGGTAGTGCCGTTCATGCTGCGGCACATGTCGCCTGACCAGCGCGCATCATTTGCCCAGCGCCTGACCGCCACC CCGGAAGGACGACAGGAATGGCGGTCGATCGTCGGGCAGGCCCAACAGATCGGCGACAATGGCACCCTCAACTGGAGAAC GCGCTGA
Upstream 100 bases:
>100_bases ATTTCCCTGATGCCCGGAGGCCACGCCATGCGGGACGAAACGCCCTGGCAGACTATGCCTATCTGCATTTCCTGATTCCT AACGCCCACACCAAAGGTGA
Downstream 100 bases:
>100_bases TGCCCTGGTATGATGATATCCTGGCGCTCGACCAGAAATATGGTGCCGGCCCATCCCCGGCGACAGCATCGGATGCGGCC GCGCCTGTCCCCACCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 748; Mature: 747
Protein sequence:
>748_residues MTAMSDNPFEAYVYDPMPVIKANNEAETAAAAIRQSNQETAAKQIANQQNMLMLAARQQAMAVPGMQGASQPNALASYAP QAGAPQGAGQNPLAQVAAQQGAPGAQSGQQPGSSYTGNPLGMVGAKADDNGVMIGPAGTVHFPSYGGREVDGLSLPQDQY WGAMSQADFGKALNDAGTARDHRNYQRAAQANTDGAWNAAIADGVKAGDISPSMGERLYNRPEYRAMILKSYAGPDSALS YSAGLTRDGMREDTTTGTPVAAPDIVAAQAAQKGTVAGAEARARGDLDTTSLTVKNKDGTYSPQTMTKSQAADYLRGQPG AAPSYSAAITGWENAGGNPAQANTSGPGGTSTSTAVGNGQFTRAGWIQDVREMRPDLAKGKTDAEIAALRTDPQISGQMI EARAGRNSQRFSELGVPANAPTLALAHRYGADGAAAILRASQQNPGLTLQQVLPAAAQKNPALASLTVGGIVGDAGRRFM MVQAPGQQPSGGPAGSPDQAAAAGQDGGAAMPGIAGMPQLTPQAQKDLEIATARTKAQNDADIGLMKDYRSDLTKQSKAA QSQNFLIDQMKDEMPGWTSGPNAASVGKMNAVLDDISQRLGYGKPDPGLGRYQDFVKNEKQVLSAAVHMNNQAGGFHITQ AMESGSPNASMSPTALRDMFSQMQGMNDWLMAKERAASKFTGKSDDFDSDWNTAVSVVPFMLRHMSPDQRASFAQRLTAT PEGRQEWRSIVGQAQQIGDNGTLNWRTR
Sequences:
>Translated_748_residues MTAMSDNPFEAYVYDPMPVIKANNEAETAAAAIRQSNQETAAKQIANQQNMLMLAARQQAMAVPGMQGASQPNALASYAP QAGAPQGAGQNPLAQVAAQQGAPGAQSGQQPGSSYTGNPLGMVGAKADDNGVMIGPAGTVHFPSYGGREVDGLSLPQDQY WGAMSQADFGKALNDAGTARDHRNYQRAAQANTDGAWNAAIADGVKAGDISPSMGERLYNRPEYRAMILKSYAGPDSALS YSAGLTRDGMREDTTTGTPVAAPDIVAAQAAQKGTVAGAEARARGDLDTTSLTVKNKDGTYSPQTMTKSQAADYLRGQPG AAPSYSAAITGWENAGGNPAQANTSGPGGTSTSTAVGNGQFTRAGWIQDVREMRPDLAKGKTDAEIAALRTDPQISGQMI EARAGRNSQRFSELGVPANAPTLALAHRYGADGAAAILRASQQNPGLTLQQVLPAAAQKNPALASLTVGGIVGDAGRRFM MVQAPGQQPSGGPAGSPDQAAAAGQDGGAAMPGIAGMPQLTPQAQKDLEIATARTKAQNDADIGLMKDYRSDLTKQSKAA QSQNFLIDQMKDEMPGWTSGPNAASVGKMNAVLDDISQRLGYGKPDPGLGRYQDFVKNEKQVLSAAVHMNNQAGGFHITQ AMESGSPNASMSPTALRDMFSQMQGMNDWLMAKERAASKFTGKSDDFDSDWNTAVSVVPFMLRHMSPDQRASFAQRLTAT PEGRQEWRSIVGQAQQIGDNGTLNWRTR >Mature_747_residues TAMSDNPFEAYVYDPMPVIKANNEAETAAAAIRQSNQETAAKQIANQQNMLMLAARQQAMAVPGMQGASQPNALASYAPQ AGAPQGAGQNPLAQVAAQQGAPGAQSGQQPGSSYTGNPLGMVGAKADDNGVMIGPAGTVHFPSYGGREVDGLSLPQDQYW GAMSQADFGKALNDAGTARDHRNYQRAAQANTDGAWNAAIADGVKAGDISPSMGERLYNRPEYRAMILKSYAGPDSALSY SAGLTRDGMREDTTTGTPVAAPDIVAAQAAQKGTVAGAEARARGDLDTTSLTVKNKDGTYSPQTMTKSQAADYLRGQPGA APSYSAAITGWENAGGNPAQANTSGPGGTSTSTAVGNGQFTRAGWIQDVREMRPDLAKGKTDAEIAALRTDPQISGQMIE ARAGRNSQRFSELGVPANAPTLALAHRYGADGAAAILRASQQNPGLTLQQVLPAAAQKNPALASLTVGGIVGDAGRRFMM VQAPGQQPSGGPAGSPDQAAAAGQDGGAAMPGIAGMPQLTPQAQKDLEIATARTKAQNDADIGLMKDYRSDLTKQSKAAQ SQNFLIDQMKDEMPGWTSGPNAASVGKMNAVLDDISQRLGYGKPDPGLGRYQDFVKNEKQVLSAAVHMNNQAGGFHITQA MESGSPNASMSPTALRDMFSQMQGMNDWLMAKERAASKFTGKSDDFDSDWNTAVSVVPFMLRHMSPDQRASFAQRLTATP EGRQEWRSIVGQAQQIGDNGTLNWRTR
Specific function: Unknown
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78232; Mature: 78100
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMSDNPFEAYVYDPMPVIKANNEAETAAAAIRQSNQETAAKQIANQQNMLMLAARQQA CCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHH MAVPGMQGASQPNALASYAPQAGAPQGAGQNPLAQVAAQQGAPGAQSGQQPGSSYTGNPL HCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GMVGAKADDNGVMIGPAGTVHFPSYGGREVDGLSLPQDQYWGAMSQADFGKALNDAGTAR EEEECCCCCCCEEECCCCEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCHH DHRNYQRAAQANTDGAWNAAIADGVKAGDISPSMGERLYNRPEYRAMILKSYAGPDSALS HHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHH YSAGLTRDGMREDTTTGTPVAAPDIVAAQAAQKGTVAGAEARARGDLDTTSLTVKNKDGT HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEECCCCC YSPQTMTKSQAADYLRGQPGAAPSYSAAITGWENAGGNPAQANTSGPGGTSTSTAVGNGQ CCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FTRAGWIQDVREMRPDLAKGKTDAEIAALRTDPQISGQMIEARAGRNSQRFSELGVPANA CCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHCCCCCCC PTLALAHRYGADGAAAILRASQQNPGLTLQQVLPAAAQKNPALASLTVGGIVGDAGRRFM CHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECCEECCCCCEEE MVQAPGQQPSGGPAGSPDQAAAAGQDGGAAMPGIAGMPQLTPQAQKDLEIATARTKAQND EEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC ADIGLMKDYRSDLTKQSKAAQSQNFLIDQMKDEMPGWTSGPNAASVGKMNAVLDDISQRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH GYGKPDPGLGRYQDFVKNEKQVLSAAVHMNNQAGGFHITQAMESGSPNASMSPTALRDMF CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCCCHHHHHHHH SQMQGMNDWLMAKERAASKFTGKSDDFDSDWNTAVSVVPFMLRHMSPDQRASFAQRLTAT HHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC PEGRQEWRSIVGQAQQIGDNGTLNWRTR CCHHHHHHHHHHHHHHCCCCCCEECCCC >Mature Secondary Structure TAMSDNPFEAYVYDPMPVIKANNEAETAAAAIRQSNQETAAKQIANQQNMLMLAARQQA CCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHH MAVPGMQGASQPNALASYAPQAGAPQGAGQNPLAQVAAQQGAPGAQSGQQPGSSYTGNPL HCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GMVGAKADDNGVMIGPAGTVHFPSYGGREVDGLSLPQDQYWGAMSQADFGKALNDAGTAR EEEECCCCCCCEEECCCCEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCHH DHRNYQRAAQANTDGAWNAAIADGVKAGDISPSMGERLYNRPEYRAMILKSYAGPDSALS HHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHH YSAGLTRDGMREDTTTGTPVAAPDIVAAQAAQKGTVAGAEARARGDLDTTSLTVKNKDGT HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEECCCCC YSPQTMTKSQAADYLRGQPGAAPSYSAAITGWENAGGNPAQANTSGPGGTSTSTAVGNGQ CCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FTRAGWIQDVREMRPDLAKGKTDAEIAALRTDPQISGQMIEARAGRNSQRFSELGVPANA CCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHCCCCCCC PTLALAHRYGADGAAAILRASQQNPGLTLQQVLPAAAQKNPALASLTVGGIVGDAGRRFM CHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECCEECCCCCEEE MVQAPGQQPSGGPAGSPDQAAAAGQDGGAAMPGIAGMPQLTPQAQKDLEIATARTKAQND EEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC ADIGLMKDYRSDLTKQSKAAQSQNFLIDQMKDEMPGWTSGPNAASVGKMNAVLDDISQRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH GYGKPDPGLGRYQDFVKNEKQVLSAAVHMNNQAGGFHITQAMESGSPNASMSPTALRDMF CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCCCHHHHHHHH SQMQGMNDWLMAKERAASKFTGKSDDFDSDWNTAVSVVPFMLRHMSPDQRASFAQRLTAT HHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC PEGRQEWRSIVGQAQQIGDNGTLNWRTR CCHHHHHHHHHHHHHHCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA