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The map label for this gene is 162149366

Identifier: 162149366

GI number: 162149366

Start: 3682362

End: 3684890

Strand: Direct

Name: 162149366

Synonym: GDI_3600

Alternate gene names: NA

Gene position: 3682362-3684890 (Clockwise)

Preceding gene: 162149365

Following gene: 162149367

Centisome position: 93.36

GC content: 64.97

Gene sequence:

>2529_bases
ATGAACGCGGTGCCACCCAATGCGCCAGTCACCCTGCCGGCAGGAATTCCTGCTGACCCGTTCCAGCCACTGACCCCGAC
TGAGCGGCGGAATGCAGCGTCCGCTGGCGGCAAGGATGAGGTTTGGGAGCCGATTTCCCCGGCACCGTCCGAGCCGGAGT
TGCCGCGCGGGGCCTCGGCCATATGGGTCTATCGCGACGAAGAGGGCCGGCCGCTTTGCGCCCGGTTCCGCGTGGATCGT
GAGGACGGTGGGAAGGACATCCTGCCGCTGACCTATGGACGTCGGGTCTGGATCGATCGGACGGGCCAACGTCGGGATAT
CACCGGCTGGCATTGGAAACAGGCGGCCAAGCCTCTGCCGCTATACGGTCTGGATCGGCTGGCGGCCCAGCCTGATGCAT
CCGTGCTGCTGGTCGAGGGCGAGAAGACGGCGGACGCGGCCCAGCGCCTGTTTCCCGACTATGTGGTGATGACGTCACAG
GGCGGTGGAAAGGCGGTCGGCAACAATGACTGGGCACCGCTGGCCGGGCGCGAGGTGACGATCTGGCCGGACAACGACAA
GCCAGGCTTGGCCTATGCGGACTCCGTCGTCGCGGCGCTGCGTGAAGTCGGTGCGCGCGTCATCAAACAGGTACAGCTAC
CGCCCGGACTGCCGGATGGCTGGGATGTGGCTGACGATGTGCCGGAGGGGATCGCCTCATGGAGTGAGGACCCCGAGCCG
CTGCTGACCGCACTGAACCGGGCACAGGTTGCTGCTCCGAATGTCACGATGCCCAAAGGCTATCTGATGAAATCGAACGG
CCTCTATTACCGGCCGGAACAGACAGGGGAGGATATTAAGCCGGACATCTGGATATCGGAATATTTCGAAATTATTGCTG
AAACAAACGACGGAGATGGATTCGGCTGGGGCTTATTGATCCGTTGGTGGGATAGAGACGGAAGGATGCATGAGTGGTCG
ATCCCAAAGAGGATGGTCCACGGAGAAGGAAAAGATATCGCCGGCGATCTGGAAGATGCCGGTCTGAATTGTTCAATTGC
TGCGACACGTCTTCTTCGTCAGCTCATTGCTTCAGTCCGCACAATAATCCGACTGAGGTGTGTCGATCGGGCGGGCTGGC
ACCGAACCGACGACGGGCACGCCTTCATCCTGCCGGGTGGCTTCACCATCGGCGGCGGCCGACGCTCGGTCGTGTTCCAG
TCCAGCCGGGCCACTGTCGGGCGCGAGTTCACGCCCGGCGGTACGCTTGCGGACTGGCAGAAGCAGGTGGCAGCCTATGC
GGTGGGCAACAGCCGGCTGGCCCTGTTCTTGTCGGCCGCCTTCGCTGGTCCGTTGCTCGACATCATGGGGGAGCAGTCGG
GTGGCATTCATCTTGTCGGCAAGTCCCAGTCCGGCAAAAGCACGGCCGCGTTCGTGGCGGGCAGCGTGTGGGGCAAGGGT
GATCGTGACGGCCAGATCCGGGCATGGCGCGGCACCGCCAACGGGCTGGAAGGCATCGCCAGCGAGACCTCCGACACGGT
CCTGATCCTGGACGAGATGGGCCAGGCCGAACCGCGCGAGGTGGGCGAGATCGCCTACATGCTGGCGAACAATACCGGCA
AGCAGCGCGCTGGGCGGAATGGCGATGCCCGGGCGCGCAAGACATGGCGAGTTCTGTTCCTTTCGACCGGCGAGGTCACG
CTGGCCGCCAAGATGGGCGAGGCCGGCAAGCGCGCCATGGCGGGCCAGGAGGTGCGCCTGGTCAATGTTCCCGCCGATGC
GGGCGCGGGCATGGGCGCCTTCGAGCAACTGCACGGCATGCGCTCGGCCGGCGCGTTGGCGGACCATCTTCGGGTGGCGT
CCCGCACCTTCTATGGGGTGGCATCGCGGCACTTCCTCGACGCGCTGGTGCGGGACCGGGCCGCCGATCCGAAAGCACTG
GAAGCGGTGATCCGTGCCATCCGGTCGCGGTTCGAAGAAGCGTATGTCCCGGCCGGCAATGTCGATGGGCAGGTGCGCAG
TGTCGCGGCCCGGTTCGCCCTGATTGCCGCGGCGGGCGAGATCGCGACCGACTATCGCGTGCTGCCTTGGGCGCGGGGTG
AAGCCATGAAGGCTGCCGGCGTGTGCTTCCAGGCGTGGCTGTCCGAGCGTGGCAGCGTCGGGGCCAGCGAAGACGTGAAG
GCGATCGAGCAGGTCCGTGCCTTCATTGAGCAGCATGGCGAAAGCCGGTTCACCAACCTGACTCCCGATCCCACCACAGG
GGATGACCGGACGGACGATCGGGTCCGGACCATCAACCGCGCGGGCTTCAAGCGGCGTGTGACCACCCAGGATGGAGGGC
GCTGGGAATACCTGATCCTACCGGTGATGTGGAAGACGGAAGTCTGCAAGGGATTGGATGCCGCGAACGTCGCCAAGGTG
CTGCGTGATGCCGGTTATCTGACCCCGGGAAGTGACGGCAAGGGGGCGCGTGTCGTGAAAATCCCCGGCGAAGGGCCGTC
CCGCGCCTATGTGGTGAGCGGCAGCATCATGGGAGGCGACGATGCGTGA

Upstream 100 bases:

>100_bases
GCGGTGGCGATCCCGTGTCCCTGGCTGCCTATCTGTTCGACCTGAAGCAGGGGGAAGCCGCCCAGCGGCTGGCCGTCATG
CTTGGCCTGGGAGGTGAGGC

Downstream 100 bases:

>100_bases
GATCGCCGCGCCCACGCCGGGTCATGTCATTTTTGGGTGTAACCGGTGTAACCGGTGTAACCAGCGCGCGAAGGTCGCAG
AAAACTGCCATTTTTCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Prophage Primase; Superfamily II Helicase; Regulatory Protein RepA; TOPRIM Domain-Containing Protein; Bacteriophage-Related Protein; Phage Related Protein; Prim Domain Protein; Inner Membrane; MobA/MobL Family Protein; Primase C 2 Family; Bacteriophage Related Protein; Bifunctional DNA Primase/Polymerase; Conjugative Transfer Protein TraA_Ti; DNA/RNA Helicase; DNA Helicase Inner Membrane Protein; Conserved Domain Protein; TOPRIM Domain Protein; Zinc Finger CHC2-Family Protein; DNA Primase Phage/Plasmid; DNA Primase; Inner Membrane Protein Phage Origin; DNA Primase TraC

Number of amino acids: Translated: 842; Mature: 842

Protein sequence:

>842_residues
MNAVPPNAPVTLPAGIPADPFQPLTPTERRNAASAGGKDEVWEPISPAPSEPELPRGASAIWVYRDEEGRPLCARFRVDR
EDGGKDILPLTYGRRVWIDRTGQRRDITGWHWKQAAKPLPLYGLDRLAAQPDASVLLVEGEKTADAAQRLFPDYVVMTSQ
GGGKAVGNNDWAPLAGREVTIWPDNDKPGLAYADSVVAALREVGARVIKQVQLPPGLPDGWDVADDVPEGIASWSEDPEP
LLTALNRAQVAAPNVTMPKGYLMKSNGLYYRPEQTGEDIKPDIWISEYFEIIAETNDGDGFGWGLLIRWWDRDGRMHEWS
IPKRMVHGEGKDIAGDLEDAGLNCSIAATRLLRQLIASVRTIIRLRCVDRAGWHRTDDGHAFILPGGFTIGGGRRSVVFQ
SSRATVGREFTPGGTLADWQKQVAAYAVGNSRLALFLSAAFAGPLLDIMGEQSGGIHLVGKSQSGKSTAAFVAGSVWGKG
DRDGQIRAWRGTANGLEGIASETSDTVLILDEMGQAEPREVGEIAYMLANNTGKQRAGRNGDARARKTWRVLFLSTGEVT
LAAKMGEAGKRAMAGQEVRLVNVPADAGAGMGAFEQLHGMRSAGALADHLRVASRTFYGVASRHFLDALVRDRAADPKAL
EAVIRAIRSRFEEAYVPAGNVDGQVRSVAARFALIAAAGEIATDYRVLPWARGEAMKAAGVCFQAWLSERGSVGASEDVK
AIEQVRAFIEQHGESRFTNLTPDPTTGDDRTDDRVRTINRAGFKRRVTTQDGGRWEYLILPVMWKTEVCKGLDAANVAKV
LRDAGYLTPGSDGKGARVVKIPGEGPSRAYVVSGSIMGGDDA

Sequences:

>Translated_842_residues
MNAVPPNAPVTLPAGIPADPFQPLTPTERRNAASAGGKDEVWEPISPAPSEPELPRGASAIWVYRDEEGRPLCARFRVDR
EDGGKDILPLTYGRRVWIDRTGQRRDITGWHWKQAAKPLPLYGLDRLAAQPDASVLLVEGEKTADAAQRLFPDYVVMTSQ
GGGKAVGNNDWAPLAGREVTIWPDNDKPGLAYADSVVAALREVGARVIKQVQLPPGLPDGWDVADDVPEGIASWSEDPEP
LLTALNRAQVAAPNVTMPKGYLMKSNGLYYRPEQTGEDIKPDIWISEYFEIIAETNDGDGFGWGLLIRWWDRDGRMHEWS
IPKRMVHGEGKDIAGDLEDAGLNCSIAATRLLRQLIASVRTIIRLRCVDRAGWHRTDDGHAFILPGGFTIGGGRRSVVFQ
SSRATVGREFTPGGTLADWQKQVAAYAVGNSRLALFLSAAFAGPLLDIMGEQSGGIHLVGKSQSGKSTAAFVAGSVWGKG
DRDGQIRAWRGTANGLEGIASETSDTVLILDEMGQAEPREVGEIAYMLANNTGKQRAGRNGDARARKTWRVLFLSTGEVT
LAAKMGEAGKRAMAGQEVRLVNVPADAGAGMGAFEQLHGMRSAGALADHLRVASRTFYGVASRHFLDALVRDRAADPKAL
EAVIRAIRSRFEEAYVPAGNVDGQVRSVAARFALIAAAGEIATDYRVLPWARGEAMKAAGVCFQAWLSERGSVGASEDVK
AIEQVRAFIEQHGESRFTNLTPDPTTGDDRTDDRVRTINRAGFKRRVTTQDGGRWEYLILPVMWKTEVCKGLDAANVAKV
LRDAGYLTPGSDGKGARVVKIPGEGPSRAYVVSGSIMGGDDA
>Mature_842_residues
MNAVPPNAPVTLPAGIPADPFQPLTPTERRNAASAGGKDEVWEPISPAPSEPELPRGASAIWVYRDEEGRPLCARFRVDR
EDGGKDILPLTYGRRVWIDRTGQRRDITGWHWKQAAKPLPLYGLDRLAAQPDASVLLVEGEKTADAAQRLFPDYVVMTSQ
GGGKAVGNNDWAPLAGREVTIWPDNDKPGLAYADSVVAALREVGARVIKQVQLPPGLPDGWDVADDVPEGIASWSEDPEP
LLTALNRAQVAAPNVTMPKGYLMKSNGLYYRPEQTGEDIKPDIWISEYFEIIAETNDGDGFGWGLLIRWWDRDGRMHEWS
IPKRMVHGEGKDIAGDLEDAGLNCSIAATRLLRQLIASVRTIIRLRCVDRAGWHRTDDGHAFILPGGFTIGGGRRSVVFQ
SSRATVGREFTPGGTLADWQKQVAAYAVGNSRLALFLSAAFAGPLLDIMGEQSGGIHLVGKSQSGKSTAAFVAGSVWGKG
DRDGQIRAWRGTANGLEGIASETSDTVLILDEMGQAEPREVGEIAYMLANNTGKQRAGRNGDARARKTWRVLFLSTGEVT
LAAKMGEAGKRAMAGQEVRLVNVPADAGAGMGAFEQLHGMRSAGALADHLRVASRTFYGVASRHFLDALVRDRAADPKAL
EAVIRAIRSRFEEAYVPAGNVDGQVRSVAARFALIAAAGEIATDYRVLPWARGEAMKAAGVCFQAWLSERGSVGASEDVK
AIEQVRAFIEQHGESRFTNLTPDPTTGDDRTDDRVRTINRAGFKRRVTTQDGGRWEYLILPVMWKTEVCKGLDAANVAKV
LRDAGYLTPGSDGKGARVVKIPGEGPSRAYVVSGSIMGGDDA

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90955; Mature: 90955

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVPPNAPVTLPAGIPADPFQPLTPTERRNAASAGGKDEVWEPISPAPSEPELPRGASA
CCCCCCCCCEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
IWVYRDEEGRPLCARFRVDREDGGKDILPLTYGRRVWIDRTGQRRDITGWHWKQAAKPLP
EEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHCCCCC
LYGLDRLAAQPDASVLLVEGEKTADAAQRLFPDYVVMTSQGGGKAVGNNDWAPLAGREVT
CCCHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
IWPDNDKPGLAYADSVVAALREVGARVIKQVQLPPGLPDGWDVADDVPEGIASWSEDPEP
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHH
LLTALNRAQVAAPNVTMPKGYLMKSNGLYYRPEQTGEDIKPDIWISEYFEIIAETNDGDG
HHHHHHHHHCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
FGWGLLIRWWDRDGRMHEWSIPKRMVHGEGKDIAGDLEDAGLNCSIAATRLLRQLIASVR
EEEEEEEEEECCCCCEEECCCCHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHH
TIIRLRCVDRAGWHRTDDGHAFILPGGFTIGGGRRSVVFQSSRATVGREFTPGGTLADWQ
HHHHHHHHCCCCCCCCCCCCEEEECCCEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHH
KQVAAYAVGNSRLALFLSAAFAGPLLDIMGEQSGGIHLVGKSQSGKSTAAFVAGSVWGKG
HHHHHHEECCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCC
DRDGQIRAWRGTANGLEGIASETSDTVLILDEMGQAEPREVGEIAYMLANNTGKQRAGRN
CCCCCEEEEECCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHEEEEEECCCCHHHCCCC
GDARARKTWRVLFLSTGEVTLAAKMGEAGKRAMAGQEVRLVNVPADAGAGMGAFEQLHGM
CCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH
RSAGALADHLRVASRTFYGVASRHFLDALVRDRAADPKALEAVIRAIRSRFEEAYVPAGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
VDGQVRSVAARFALIAAAGEIATDYRVLPWARGEAMKAAGVCFQAWLSERGSVGASEDVK
CCHHHHHHHHHHHHHHHHCHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
AIEQVRAFIEQHGESRFTNLTPDPTTGDDRTDDRVRTINRAGFKRRVTTQDGGRWEYLIL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCEEEEEEE
PVMWKTEVCKGLDAANVAKVLRDAGYLTPGSDGKGARVVKIPGEGPSRAYVVSGSIMGGD
EEEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECEECCCC
DA
CC
>Mature Secondary Structure
MNAVPPNAPVTLPAGIPADPFQPLTPTERRNAASAGGKDEVWEPISPAPSEPELPRGASA
CCCCCCCCCEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
IWVYRDEEGRPLCARFRVDREDGGKDILPLTYGRRVWIDRTGQRRDITGWHWKQAAKPLP
EEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHCCCCC
LYGLDRLAAQPDASVLLVEGEKTADAAQRLFPDYVVMTSQGGGKAVGNNDWAPLAGREVT
CCCHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEE
IWPDNDKPGLAYADSVVAALREVGARVIKQVQLPPGLPDGWDVADDVPEGIASWSEDPEP
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHH
LLTALNRAQVAAPNVTMPKGYLMKSNGLYYRPEQTGEDIKPDIWISEYFEIIAETNDGDG
HHHHHHHHHCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
FGWGLLIRWWDRDGRMHEWSIPKRMVHGEGKDIAGDLEDAGLNCSIAATRLLRQLIASVR
EEEEEEEEEECCCCCEEECCCCHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHH
TIIRLRCVDRAGWHRTDDGHAFILPGGFTIGGGRRSVVFQSSRATVGREFTPGGTLADWQ
HHHHHHHHCCCCCCCCCCCCEEEECCCEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHH
KQVAAYAVGNSRLALFLSAAFAGPLLDIMGEQSGGIHLVGKSQSGKSTAAFVAGSVWGKG
HHHHHHEECCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCC
DRDGQIRAWRGTANGLEGIASETSDTVLILDEMGQAEPREVGEIAYMLANNTGKQRAGRN
CCCCCEEEEECCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHEEEEEECCCCHHHCCCC
GDARARKTWRVLFLSTGEVTLAAKMGEAGKRAMAGQEVRLVNVPADAGAGMGAFEQLHGM
CCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH
RSAGALADHLRVASRTFYGVASRHFLDALVRDRAADPKALEAVIRAIRSRFEEAYVPAGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
VDGQVRSVAARFALIAAAGEIATDYRVLPWARGEAMKAAGVCFQAWLSERGSVGASEDVK
CCHHHHHHHHHHHHHHHHCHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
AIEQVRAFIEQHGESRFTNLTPDPTTGDDRTDDRVRTINRAGFKRRVTTQDGGRWEYLIL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCEEEEEEE
PVMWKTEVCKGLDAANVAKVLRDAGYLTPGSDGKGARVVKIPGEGPSRAYVVSGSIMGGD
EEEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECEECCCC
DA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA