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The map label for this gene is ynbC [C]

Identifier: 162149307

GI number: 162149307

Start: 3643403

End: 3644449

Strand: Direct

Name: ynbC [C]

Synonym: GDI_3539

Alternate gene names: 162149307

Gene position: 3643403-3644449 (Clockwise)

Preceding gene: 162149290

Following gene: 162149310

Centisome position: 92.37

GC content: 76.41

Gene sequence:

>1047_bases
ATGGCCCTGCTCCCCGCCGCCCTGGCGGGGGGATGCGCGCTGCACGATCCGCCGATCCCGCGCCCGCCGCCGGCCTGGGC
GGCGGACGGCCGGCTGGTGCCCCCGGACCTGACCCTGACCCTGCCCGACGGCACGCGCGTGCCCACGCGCATGTGGCCGG
CCGCGGGCGGGCACCCACGCGCCGTGGTGCTGGCGCTGCATGGATTCGACGACAGCCGCGACGCCTGGGAAATCCCGGCT
CCGGCCCTGGCCGCGCGCGGCATCACGCTCTACGCCCCCGACCTGCGCGGCTTCGGCGGCATGCGCGATCGCGGCGGCTG
GGCGGGGGCCGGGCAGATGGTGCGCGACGCGGGCGACGAAGCCCGGATCATCGCCCGGCGCCACCCGGGCGTGCCGCTCT
ACCTGATGGGCGAGAGCATGGGCGGCGCGGTGCTGACCTGCCTGATGGCCCAGCCCGATGCCCCGCCCGGAACGCCACCC
ATTGCCGGCACCATCCTGCTGGCCCCGGCGGCGTGGAAACTGGGCCCGGAAGCCGAGACCGTGCTGCGGCTGCTGGCCGC
AACCGCCCCGGACTGGCGCATGACCGGGCACGAACTGCCCGTGCATGTCGTCGCGGGCGACGATCTGGCTGCGATGCGGC
GGCTGTATTACGACCCGCTGACCCTGCGCGCGACCCGGATGCGCGCCCTGTCCGGCCTGGCGGCGCTGATGCGGCACGCG
GCGGACGACGCCCCGCGCCTGCGCGGCCCGGCGCTGGTGGTCTATGGCGGCCACGACCAGCTGGTCCCGCCCCAGGCGAT
GGCCGACCTGTGGCGCCGCCTGCCCCCGGGCGTGCGGCGGGACTACGTGCCCGGCGGCTATCATCTGCTGATGCGCGGCC
GCAGCCGCGACGCGGTGATCGGCGACGTGGCGGACTGGATCACCGCGCCCGACCAGCCCCTGCCCTCGGGCGGCGACCTA
GCCGCCGCCACATGGTCCGCCCAGCCCCATGACGGCAGCGACGCCCCGCCCCTGCTGCTCGCCCCACTGGACAGTCTGGC
CAAATAA

Upstream 100 bases:

>100_bases
TGTGGCCGTATCGGCCGGTGGCCAGGAATGACGCGCGATGATACGCAGGATTGCCGTGCTTTCAAACCGTCGCCTCTCAC
GCCTGCGCTGTCGCCTCCTC

Downstream 100 bases:

>100_bases
TCCTGGCCAAATAAATCCCGCCACGGGGCTGGCGTCTTCTGGCCGTTCAGGGTATGGAGGCGTCACTGGACTCGTAGCTC
AGCTGGATAGAGCGTCGCCC

Product: alpha/beta hydrolase

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold; Lysophospholipase; Alpha/Beta Fold Family Hydrolase; Esterase/Lipase; Acylglycerol Lipase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MALLPAALAGGCALHDPPIPRPPPAWAADGRLVPPDLTLTLPDGTRVPTRMWPAAGGHPRAVVLALHGFDDSRDAWEIPA
PALAARGITLYAPDLRGFGGMRDRGGWAGAGQMVRDAGDEARIIARRHPGVPLYLMGESMGGAVLTCLMAQPDAPPGTPP
IAGTILLAPAAWKLGPEAETVLRLLAATAPDWRMTGHELPVHVVAGDDLAAMRRLYYDPLTLRATRMRALSGLAALMRHA
ADDAPRLRGPALVVYGGHDQLVPPQAMADLWRRLPPGVRRDYVPGGYHLLMRGRSRDAVIGDVADWITAPDQPLPSGGDL
AAATWSAQPHDGSDAPPLLLAPLDSLAK

Sequences:

>Translated_348_residues
MALLPAALAGGCALHDPPIPRPPPAWAADGRLVPPDLTLTLPDGTRVPTRMWPAAGGHPRAVVLALHGFDDSRDAWEIPA
PALAARGITLYAPDLRGFGGMRDRGGWAGAGQMVRDAGDEARIIARRHPGVPLYLMGESMGGAVLTCLMAQPDAPPGTPP
IAGTILLAPAAWKLGPEAETVLRLLAATAPDWRMTGHELPVHVVAGDDLAAMRRLYYDPLTLRATRMRALSGLAALMRHA
ADDAPRLRGPALVVYGGHDQLVPPQAMADLWRRLPPGVRRDYVPGGYHLLMRGRSRDAVIGDVADWITAPDQPLPSGGDL
AAATWSAQPHDGSDAPPLLLAPLDSLAK
>Mature_347_residues
ALLPAALAGGCALHDPPIPRPPPAWAADGRLVPPDLTLTLPDGTRVPTRMWPAAGGHPRAVVLALHGFDDSRDAWEIPAP
ALAARGITLYAPDLRGFGGMRDRGGWAGAGQMVRDAGDEARIIARRHPGVPLYLMGESMGGAVLTCLMAQPDAPPGTPPI
AGTILLAPAAWKLGPEAETVLRLLAATAPDWRMTGHELPVHVVAGDDLAAMRRLYYDPLTLRATRMRALSGLAALMRHAA
DDAPRLRGPALVVYGGHDQLVPPQAMADLWRRLPPGVRRDYVPGGYHLLMRGRSRDAVIGDVADWITAPDQPLPSGGDLA
AATWSAQPHDGSDAPPLLLAPLDSLAK

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36743; Mature: 36612

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLPAALAGGCALHDPPIPRPPPAWAADGRLVPPDLTLTLPDGTRVPTRMWPAAGGHPR
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCEECCCCCCCCC
AVVLALHGFDDSRDAWEIPAPALAARGITLYAPDLRGFGGMRDRGGWAGAGQMVRDAGDE
EEEEEEECCCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCC
ARIIARRHPGVPLYLMGESMGGAVLTCLMAQPDAPPGTPPIAGTILLAPAAWKLGPEAET
EEEEEECCCCCEEEEECCCCCCHHEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
VLRLLAATAPDWRMTGHELPVHVVAGDDLAAMRRLYYDPLTLRATRMRALSGLAALMRHA
HHHHHHHCCCCCEECCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ADDAPRLRGPALVVYGGHDQLVPPQAMADLWRRLPPGVRRDYVPGGYHLLMRGRSRDAVI
CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEE
GDVADWITAPDQPLPSGGDLAAATWSAQPHDGSDAPPLLLAPLDSLAK
HHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECHHHHCC
>Mature Secondary Structure 
ALLPAALAGGCALHDPPIPRPPPAWAADGRLVPPDLTLTLPDGTRVPTRMWPAAGGHPR
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCEECCCCCCCCC
AVVLALHGFDDSRDAWEIPAPALAARGITLYAPDLRGFGGMRDRGGWAGAGQMVRDAGDE
EEEEEEECCCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCC
ARIIARRHPGVPLYLMGESMGGAVLTCLMAQPDAPPGTPPIAGTILLAPAAWKLGPEAET
EEEEEECCCCCEEEEECCCCCCHHEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
VLRLLAATAPDWRMTGHELPVHVVAGDDLAAMRRLYYDPLTLRATRMRALSGLAALMRHA
HHHHHHHCCCCCEECCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ADDAPRLRGPALVVYGGHDQLVPPQAMADLWRRLPPGVRRDYVPGGYHLLMRGRSRDAVI
CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEE
GDVADWITAPDQPLPSGGDLAAATWSAQPHDGSDAPPLLLAPLDSLAK
HHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA