Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is 162149142
Identifier: 162149142
GI number: 162149142
Start: 3476784
End: 3478550
Strand: Direct
Name: 162149142
Synonym: GDI_3372
Alternate gene names: NA
Gene position: 3476784-3478550 (Clockwise)
Preceding gene: 162149141
Following gene: 162149195
Centisome position: 88.15
GC content: 61.06
Gene sequence:
>1767_bases ATGGTGTCCCACCTGAAGCAGTCCATCGCACGAGCCGACGCCGTCTCTTTCGATGTGTTCGATACGCTGTTCGTCCGCCC GCTTGCCGATCCGGAAGACCTCTTCGACATCATCGGCGAGAAATTCGGCATCGCCTCCTTCCGCCGCCTGCGCCAGGAAG CGCAGGTACGGGCGTTCCAGCGCATGCGGGAGAACGGACAGAAGGAAATCACGCTCGACGGCATCTATGCGTGCTTCGAT TCCGTGTCGGTGCCGGCATCCGTGCTGCGCGATGCCGAGTACCAGCTCGAACTCGCCCTGACGCTGCCCAATCCCGATCT CATGGACGTGTTCAGGCAGACGATCGCCGATAAACCCGTCGTCATCACGTCGGATATGTACCTGCCGCAAGCCTTCTTCG ACGATCTTTTCCACAAGCACCGGCTGCAGCCCAGCGCGACCTTCATTTCGTCGGAGCGAAACGCAACCAAGCGCGATACC GGTGAACTGTTCGACCGGGTGTCACAGGAACTCGGCATAGACCCGGGGCGCATCCTGCATATCGGGGACAATCCGCTGTC GGACGTGGAACGGGCCAGGCAAAAAGGCCTGTCCGCCTATCATTACGTCGATCCCACACGACAGCAGAAATCCAGTCGCT TTCCCCCGTCGGCATCGATCGCCGGCAGCCTCATCCGCTCGATCGCCGATCGGCCGCCGCCGGGATCGTTTACCGAACTC GGGTTTCGTTTCGGCGGGCCGGCGGCAGTGGGCTTCCTCGACTGGATTGTCCGCAAATCAGCGCAGGACAAGATCGACAT CGTGCTGTTCGTATCGCGAGACGGATATGTTCTTGAACGCCTCGCCCGCACGATGCCCGCGGGGACCTTGCCGCGTTTCA CCTATTTCATGGGCTCGCGCGTCGCCTTTACGCTCGCCGCCACCGACGAGTCCAACTTCAATACGCAGATGGAATTCTTC CTTGCGGGCGCACATGGATTGCGGCCGATCGAGGTGCTGGAGCGGCTGGGCGTCACGCCACCGGCCGACCGGGTGATGGA TGACCTCGGCCTCGGAGCCGGAATCGTCATCAGCAATGACAATATCAGCCGCATCCGGGATTTCGTGGGCGCCTTCCGCG GAGACATCCTGCAGGTATGCCGTCGCAACCGGCGCGGCCTCCTCAACTACCTCAAACAGGTGGGCGTTGAACCGGGCATG CGCGTCGCCATGGTCGATGTGGGCTGGAACGGAACGACGCAGGATGCCTTCGACCTCGCCCTCGGCAAGCTGATGCAGGT CGAACTGTTCGGCTACTACCTGTGCCTGAACGAATCGGATGATTGCCGGCGGCGGCGGCAAAGACTGAGGATGGACGCCC TGCTGTCGCGCGAATCAATCGGCCCGGAACGGGTAACCGCCGTTTATGCCAATCGTGTCGCCGTCGAACTGTTCTTCTCG GCACCCCATGACGCCGTCATCGGCTACCAGGATGCGATTGGAAAGGATGTCGCCATCATCGAGGATTCCGGGCGAATTGC CATTGATGGCCATGCCCGAATTTCGACGGAGATCACGGACGGCATCGAACAGTTCGCGCTGACATTCCGTAATCTTTGCG CCGAGATCGGCCTTGTTGCCGATCCGCTGGCGACTGCACTGCCGGTTGTGGACTTTGTCGAATCGATTGACGCGGAAACG CGCGGCTTACTGGCGTCCGTCGAAAATTTCGATGCATGGGGCAGTACGCGAAACCAGCGCGTCGCGCTGACGACATACCT GCCGTAA
Upstream 100 bases:
>100_bases TTCTACAATCCCAATTTGGGACCCAATGATTTTTATTTTTCGCTTTCATGAAACCGACTCGCTTTAATTCGATTTTTCTA TAATTTTTTGCGGAATAGTT
Downstream 100 bases:
>100_bases GGCAAGGCCCGTCCCCTGCCGGGCATCGGCGCCCCCCGACGGGCCGCCGACGCCCGGACCTACAGGATTTTCCTTGCCGT GCGCTCCTTCCCTCCCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: HAD Superfamily Hydrolase-Like Protein; Haloacid Dehalogenase Domain Protein Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Hydrolase; Hydrolase Protein; Sugar Transferase; Capsule Polysaccharide Biosynthesis Protein; HAD Family Hydrolase; Glycosyl Transferase Family Protein; Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MVSHLKQSIARADAVSFDVFDTLFVRPLADPEDLFDIIGEKFGIASFRRLRQEAQVRAFQRMRENGQKEITLDGIYACFD SVSVPASVLRDAEYQLELALTLPNPDLMDVFRQTIADKPVVITSDMYLPQAFFDDLFHKHRLQPSATFISSERNATKRDT GELFDRVSQELGIDPGRILHIGDNPLSDVERARQKGLSAYHYVDPTRQQKSSRFPPSASIAGSLIRSIADRPPPGSFTEL GFRFGGPAAVGFLDWIVRKSAQDKIDIVLFVSRDGYVLERLARTMPAGTLPRFTYFMGSRVAFTLAATDESNFNTQMEFF LAGAHGLRPIEVLERLGVTPPADRVMDDLGLGAGIVISNDNISRIRDFVGAFRGDILQVCRRNRRGLLNYLKQVGVEPGM RVAMVDVGWNGTTQDAFDLALGKLMQVELFGYYLCLNESDDCRRRRQRLRMDALLSRESIGPERVTAVYANRVAVELFFS APHDAVIGYQDAIGKDVAIIEDSGRIAIDGHARISTEITDGIEQFALTFRNLCAEIGLVADPLATALPVVDFVESIDAET RGLLASVENFDAWGSTRNQRVALTTYLP
Sequences:
>Translated_588_residues MVSHLKQSIARADAVSFDVFDTLFVRPLADPEDLFDIIGEKFGIASFRRLRQEAQVRAFQRMRENGQKEITLDGIYACFD SVSVPASVLRDAEYQLELALTLPNPDLMDVFRQTIADKPVVITSDMYLPQAFFDDLFHKHRLQPSATFISSERNATKRDT GELFDRVSQELGIDPGRILHIGDNPLSDVERARQKGLSAYHYVDPTRQQKSSRFPPSASIAGSLIRSIADRPPPGSFTEL GFRFGGPAAVGFLDWIVRKSAQDKIDIVLFVSRDGYVLERLARTMPAGTLPRFTYFMGSRVAFTLAATDESNFNTQMEFF LAGAHGLRPIEVLERLGVTPPADRVMDDLGLGAGIVISNDNISRIRDFVGAFRGDILQVCRRNRRGLLNYLKQVGVEPGM RVAMVDVGWNGTTQDAFDLALGKLMQVELFGYYLCLNESDDCRRRRQRLRMDALLSRESIGPERVTAVYANRVAVELFFS APHDAVIGYQDAIGKDVAIIEDSGRIAIDGHARISTEITDGIEQFALTFRNLCAEIGLVADPLATALPVVDFVESIDAET RGLLASVENFDAWGSTRNQRVALTTYLP >Mature_588_residues MVSHLKQSIARADAVSFDVFDTLFVRPLADPEDLFDIIGEKFGIASFRRLRQEAQVRAFQRMRENGQKEITLDGIYACFD SVSVPASVLRDAEYQLELALTLPNPDLMDVFRQTIADKPVVITSDMYLPQAFFDDLFHKHRLQPSATFISSERNATKRDT GELFDRVSQELGIDPGRILHIGDNPLSDVERARQKGLSAYHYVDPTRQQKSSRFPPSASIAGSLIRSIADRPPPGSFTEL GFRFGGPAAVGFLDWIVRKSAQDKIDIVLFVSRDGYVLERLARTMPAGTLPRFTYFMGSRVAFTLAATDESNFNTQMEFF LAGAHGLRPIEVLERLGVTPPADRVMDDLGLGAGIVISNDNISRIRDFVGAFRGDILQVCRRNRRGLLNYLKQVGVEPGM RVAMVDVGWNGTTQDAFDLALGKLMQVELFGYYLCLNESDDCRRRRQRLRMDALLSRESIGPERVTAVYANRVAVELFFS APHDAVIGYQDAIGKDVAIIEDSGRIAIDGHARISTEITDGIEQFALTFRNLCAEIGLVADPLATALPVVDFVESIDAET RGLLASVENFDAWGSTRNQRVALTTYLP
Specific function: Unknown
COG id: COG5610
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65446; Mature: 65446
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSHLKQSIARADAVSFDVFDTLFVRPLADPEDLFDIIGEKFGIASFRRLRQEAQVRAFQ CHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RMRENGQKEITLDGIYACFDSVSVPASVLRDAEYQLELALTLPNPDLMDVFRQTIADKPV HHHHCCCCEEEHHHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCE VITSDMYLPQAFFDDLFHKHRLQPSATFISSERNATKRDTGELFDRVSQELGIDPGRILH EEECCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE IGDNPLSDVERARQKGLSAYHYVDPTRQQKSSRFPPSASIAGSLIRSIADRPPPGSFTEL ECCCCHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH GFRFGGPAAVGFLDWIVRKSAQDKIDIVLFVSRDGYVLERLARTMPAGTLPRFTYFMGSR CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHCCC VAFTLAATDESNFNTQMEFFLAGAHGLRPIEVLERLGVTPPADRVMDDLGLGAGIVISND EEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECC NISRIRDFVGAFRGDILQVCRRNRRGLLNYLKQVGVEPGMRVAMVDVGWNGTTQDAFDLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHH LGKLMQVELFGYYLCLNESDDCRRRRQRLRMDALLSRESIGPERVTAVYANRVAVELFFS HHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEEC APHDAVIGYQDAIGKDVAIIEDSGRIAIDGHARISTEITDGIEQFALTFRNLCAEIGLVA CCCCCEECCHHHCCCCEEEEECCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHH DPLATALPVVDFVESIDAETRGLLASVENFDAWGSTRNQRVALTTYLP HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MVSHLKQSIARADAVSFDVFDTLFVRPLADPEDLFDIIGEKFGIASFRRLRQEAQVRAFQ CHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RMRENGQKEITLDGIYACFDSVSVPASVLRDAEYQLELALTLPNPDLMDVFRQTIADKPV HHHHCCCCEEEHHHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCE VITSDMYLPQAFFDDLFHKHRLQPSATFISSERNATKRDTGELFDRVSQELGIDPGRILH EEECCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE IGDNPLSDVERARQKGLSAYHYVDPTRQQKSSRFPPSASIAGSLIRSIADRPPPGSFTEL ECCCCHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH GFRFGGPAAVGFLDWIVRKSAQDKIDIVLFVSRDGYVLERLARTMPAGTLPRFTYFMGSR CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHCCC VAFTLAATDESNFNTQMEFFLAGAHGLRPIEVLERLGVTPPADRVMDDLGLGAGIVISND EEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECC NISRIRDFVGAFRGDILQVCRRNRRGLLNYLKQVGVEPGMRVAMVDVGWNGTTQDAFDLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHH LGKLMQVELFGYYLCLNESDDCRRRRQRLRMDALLSRESIGPERVTAVYANRVAVELFFS HHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEEC APHDAVIGYQDAIGKDVAIIEDSGRIAIDGHARISTEITDGIEQFALTFRNLCAEIGLVA CCCCCEECCHHHCCCCEEEEECCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHH DPLATALPVVDFVESIDAETRGLLASVENFDAWGSTRNQRVALTTYLP HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA