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The map label for this gene is fliM [H]

Identifier: 162147486

GI number: 162147486

Start: 1723516

End: 1724703

Strand: Reverse

Name: fliM [H]

Synonym: GDI_1702

Alternate gene names: 162147486

Gene position: 1724703-1723516 (Counterclockwise)

Preceding gene: 162147487

Following gene: 162147485

Centisome position: 43.73

GC content: 61.95

Gene sequence:

>1188_bases
ATGCAGGACGGGGACGACACGACGAAGGGAGCCGACCACCACGAGACGGCCGCCGGATCCCAGCCCGAGCCCGTGCATGA
GGCCGCGCCTGCCGGGGCAGGCGGCGGGCACGCCGCCAAGGAAGACAGTTCGCCCGCGATGGCTCATGACGATATGGGTG
GTCACGTGCTGGACCAGTCCGAAATCGACAGCCTGCTGGGGAACGCGTTCGGCGGGCTTCCCATCAAGGAAGAGTCCGGC
CTGGAACGGGTCATCAAGGCAGGGTTCGTGGCCTACGAACGCCTGCCGATGCTGGAGATCGTATTCGACCGCCTGGTCCG
GATGTTGTCGTCCACGCTCCGCAGCTTCACGAACGACAACGTCGAAATCACCATCGACGGCATGCGCTCGATGAGCTTCG
GCGACTATATGAATGCCGTGCCGTCATCGTCCCTGTTCGCGGTCTTCAAGGCCGTGCAATGGGAAAATTACGGCCTGATC
GTCATCGATTCCGCGCTGTCCTACTCGATCATCGACATCCTGATGGGTGGTCCGCGCGGGGTCGGCTACGCAGGGGTGGA
AGCGCGCCCACATACCGCCATCGAAAGGGCGCTGATCGAAAAGCTCGTCACGTTGACGCTCAACGATCTTTCCACGGCCT
TCAATCCGGTCTGCACCATCGACCTGACGTTCGAGCGGCTTGAGGTCAGTGCGCGCTTCGCCGCGATCGCACGCGCCTCG
AACGCCGTCGTGATGACCAAGCTTCACATCGACATGGAGGACCGGAGCGGAAGCCTGGACCTGATCATTCCCTACGTGAC
GCTGGAACCTGTCCGCGATCAGTTGTCCCAGCAATTCATGGGCGAGCGGTTCGGACGCGATTCAAAATGGGAAGGTCACC
TGGTTTCCGAAATTCTCGAAACCGACATCCAGGTTTCGGCGGTATTCGAGGAAAAGACGATTCTGCTTTCGGAGGTCCTC
GGCCTCCGTCCCGGCATGCTGATCAGCTTTCCCCATCAGAACGGAACACCGATCCACGTCCGGCTCCAATGCGGCCAGAC
CCCCCTGTTCGAGGGACGGCTGGGAAAACTGCAGGACAAGGCAGCCGTTAAGATCGAGAAGAGGCTGGTGCCACCCGCTG
GGCCGCACATGAACGAGGCGGCCGTTCCCGATCCGGCCCCGCCAGACGAGCAGAAGACGCAAGCCTGA

Upstream 100 bases:

>100_bases
TGACCAATCTCTACCTCGTCGATTTTCTCGTCCAGTGATCCCGCAGACCTCCGAAATATCGAAAAATTTTACTCATCTGG
GAACGGCGGCAAGCAACGAC

Downstream 100 bases:

>100_bases
ATGGAATGGACCGTCGCCCCGCCCCGTGCGGCGGGGACTGGAACGCGACGGGGCGGACTCGTCCAGTCGCAAGACGATGC
TTTAAGAACAGAAAGCCAGA

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MQDGDDTTKGADHHETAAGSQPEPVHEAAPAGAGGGHAAKEDSSPAMAHDDMGGHVLDQSEIDSLLGNAFGGLPIKEESG
LERVIKAGFVAYERLPMLEIVFDRLVRMLSSTLRSFTNDNVEITIDGMRSMSFGDYMNAVPSSSLFAVFKAVQWENYGLI
VIDSALSYSIIDILMGGPRGVGYAGVEARPHTAIERALIEKLVTLTLNDLSTAFNPVCTIDLTFERLEVSARFAAIARAS
NAVVMTKLHIDMEDRSGSLDLIIPYVTLEPVRDQLSQQFMGERFGRDSKWEGHLVSEILETDIQVSAVFEEKTILLSEVL
GLRPGMLISFPHQNGTPIHVRLQCGQTPLFEGRLGKLQDKAAVKIEKRLVPPAGPHMNEAAVPDPAPPDEQKTQA

Sequences:

>Translated_395_residues
MQDGDDTTKGADHHETAAGSQPEPVHEAAPAGAGGGHAAKEDSSPAMAHDDMGGHVLDQSEIDSLLGNAFGGLPIKEESG
LERVIKAGFVAYERLPMLEIVFDRLVRMLSSTLRSFTNDNVEITIDGMRSMSFGDYMNAVPSSSLFAVFKAVQWENYGLI
VIDSALSYSIIDILMGGPRGVGYAGVEARPHTAIERALIEKLVTLTLNDLSTAFNPVCTIDLTFERLEVSARFAAIARAS
NAVVMTKLHIDMEDRSGSLDLIIPYVTLEPVRDQLSQQFMGERFGRDSKWEGHLVSEILETDIQVSAVFEEKTILLSEVL
GLRPGMLISFPHQNGTPIHVRLQCGQTPLFEGRLGKLQDKAAVKIEKRLVPPAGPHMNEAAVPDPAPPDEQKTQA
>Mature_395_residues
MQDGDDTTKGADHHETAAGSQPEPVHEAAPAGAGGGHAAKEDSSPAMAHDDMGGHVLDQSEIDSLLGNAFGGLPIKEESG
LERVIKAGFVAYERLPMLEIVFDRLVRMLSSTLRSFTNDNVEITIDGMRSMSFGDYMNAVPSSSLFAVFKAVQWENYGLI
VIDSALSYSIIDILMGGPRGVGYAGVEARPHTAIERALIEKLVTLTLNDLSTAFNPVCTIDLTFERLEVSARFAAIARAS
NAVVMTKLHIDMEDRSGSLDLIIPYVTLEPVRDQLSQQFMGERFGRDSKWEGHLVSEILETDIQVSAVFEEKTILLSEVL
GLRPGMLISFPHQNGTPIHVRLQCGQTPLFEGRLGKLQDKAAVKIEKRLVPPAGPHMNEAAVPDPAPPDEQKTQA

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=339, Percent_Identity=24.4837758112094, Blast_Score=111, Evalue=7e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 42882; Mature: 42882

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDGDDTTKGADHHETAAGSQPEPVHEAAPAGAGGGHAAKEDSSPAMAHDDMGGHVLDQS
CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EIDSLLGNAFGGLPIKEESGLERVIKAGFVAYERLPMLEIVFDRLVRMLSSTLRSFTNDN
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
VEITIDGMRSMSFGDYMNAVPSSSLFAVFKAVQWENYGLIVIDSALSYSIIDILMGGPRG
EEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCC
VGYAGVEARPHTAIERALIEKLVTLTLNDLSTAFNPVCTIDLTFERLEVSARFAAIARAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCC
NAVVMTKLHIDMEDRSGSLDLIIPYVTLEPVRDQLSQQFMGERFGRDSKWEGHLVSEILE
CEEEEEEEEEEECCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
TDIQVSAVFEEKTILLSEVLGLRPGMLISFPHQNGTPIHVRLQCGQTPLFEGRLGKLQDK
CCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHH
AAVKIEKRLVPPAGPHMNEAAVPDPAPPDEQKTQA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQDGDDTTKGADHHETAAGSQPEPVHEAAPAGAGGGHAAKEDSSPAMAHDDMGGHVLDQS
CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EIDSLLGNAFGGLPIKEESGLERVIKAGFVAYERLPMLEIVFDRLVRMLSSTLRSFTNDN
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
VEITIDGMRSMSFGDYMNAVPSSSLFAVFKAVQWENYGLIVIDSALSYSIIDILMGGPRG
EEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCC
VGYAGVEARPHTAIERALIEKLVTLTLNDLSTAFNPVCTIDLTFERLEVSARFAAIARAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCC
NAVVMTKLHIDMEDRSGSLDLIIPYVTLEPVRDQLSQQFMGERFGRDSKWEGHLVSEILE
CEEEEEEEEEEECCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
TDIQVSAVFEEKTILLSEVLGLRPGMLISFPHQNGTPIHVRLQCGQTPLFEGRLGKLQDK
CCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHH
AAVKIEKRLVPPAGPHMNEAAVPDPAPPDEQKTQA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1315735 [H]