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The map label for this gene is yoaB [C]

Identifier: 162146765

GI number: 162146765

Start: 957436

End: 957786

Strand: Reverse

Name: yoaB [C]

Synonym: GDI_0945

Alternate gene names: 162146765

Gene position: 957786-957436 (Counterclockwise)

Preceding gene: 162146766

Following gene: 162146764

Centisome position: 24.28

GC content: 64.1

Gene sequence:

>351_bases
ATGAGCAAGATCATCCGCACGGAACCGAACGCGATCCTGTCGAAGGTCGTGGAATATCACGGCTTCCTGTTTACCCAGGG
TTTCGTCGCGCGCGACCTGACGGGCGACGCGACCACCCAGACCCGCGACATTCTGGAGCAGATCGACGAGGCGCTGGAAC
TGCACGGCACCGACAAGACCCGCCTGCTGCAGGCCCAGATCTGGCTGAAGGACATTGCCGACCGCGACGACCTGAACGCC
GTGTGGTCCGCGTGGCTGCCGAAGGACGGCGCACCGGCGCGCGCCTGCGTGCAGGCGGTCATGGCCAATCCGGCGATGCT
GGTCGAAATCATGGTCATCTGCACGAAGTAG

Upstream 100 bases:

>100_bases
GCCGGTCCCGGTTTGACTGGTCCCAGTTGACCGGCCCTGCCCGGGTGTCGGACAAGAGCGGGCGCGGCCCCGTCGGCCGC
CATGACGAAGGACTGGCCCC

Downstream 100 bases:

>100_bases
GACGCACACGTCACAGCCTGGAGCGGGGTCCGGCGACAACACATACCTGTCGCATTTTGGCAACGGATCCCGATTCCGAT
TCGAACGCAGCCGGTTCGCC

Product: endoribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSKIIRTEPNAILSKVVEYHGFLFTQGFVARDLTGDATTQTRDILEQIDEALELHGTDKTRLLQAQIWLKDIADRDDLNA
VWSAWLPKDGAPARACVQAVMANPAMLVEIMVICTK

Sequences:

>Translated_116_residues
MSKIIRTEPNAILSKVVEYHGFLFTQGFVARDLTGDATTQTRDILEQIDEALELHGTDKTRLLQAQIWLKDIADRDDLNA
VWSAWLPKDGAPARACVQAVMANPAMLVEIMVICTK
>Mature_115_residues
SKIIRTEPNAILSKVVEYHGFLFTQGFVARDLTGDATTQTRDILEQIDEALELHGTDKTRLLQAQIWLKDIADRDDLNAV
WSAWLPKDGAPARACVQAVMANPAMLVEIMVICTK

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=111, Percent_Identity=38.7387387387387, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12939; Mature: 12808

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIIRTEPNAILSKVVEYHGFLFTQGFVARDLTGDATTQTRDILEQIDEALELHGTDKT
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
RLLQAQIWLKDIADRDDLNAVWSAWLPKDGAPARACVQAVMANPAMLVEIMVICTK
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SKIIRTEPNAILSKVVEYHGFLFTQGFVARDLTGDATTQTRDILEQIDEALELHGTDKT
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
RLLQAQIWLKDIADRDDLNAVWSAWLPKDGAPARACVQAVMANPAMLVEIMVICTK
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA