Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
---|---|
Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is epsH [H]
Identifier: 162146742
GI number: 162146742
Start: 933346
End: 936207
Strand: Reverse
Name: epsH [H]
Synonym: GDI_0920
Alternate gene names: 162146742
Gene position: 936207-933346 (Counterclockwise)
Preceding gene: 162146746
Following gene: 162146740
Centisome position: 23.74
GC content: 71.38
Gene sequence:
>2862_bases ATGACGCGTGACCTCCTCCTGGCAGAATGGACGACCGACATCCCGATGGACGCTGACGAACGGCTTTCGCCCTGCCCGCT GCCCGAAGGGCTTCGCCTGATGGGCCGCGACGCGCTCGATCCCTATTTCCTGGTGCCGCCCGAACTGGACCCCGATCCCG CCATCAACGCGGTGCTGCCGTTCCTGGGCTGGATCGTCACGCTGGCCCGGCCCCGCCGCATCGGCCTGATGCCGGCCCGG AAGGCGATCGCGGCCCTGATGGCGGACGTGGCGCACCGGATGCGCCTGCCGGCGGACATCCGCGCCCTGCCGTTCCAGCC GCCGCCTGCCGGATTCGACCTGCTATGGCTGGATCTTCCGCCGGCCAGCACGCCGGATGCCGCCCTGGCACCGACGCCCG ACCAGATGCTCCAGCTGCTGGGCCAGGGGGGCATTGTCGTGCTGCACGGCCTGGATAGCGGCGGCTGGGACGACCTTTCC ATGGCGACCCTGAATCTGGGGCGCGGACTGGGCGTGCTGGTAGGGGGCGCGTGTCGCGGGGGCTCCGTGGCCAGCCTGTG CGCGATGCTGAATCGTTCCGACGACGGCACGGCAGCCAACCTGGCCGCCCGCTTCGCCGCGATCGGCGCGCATTGGGCCG CCCGCCGCGCCCTGGCCGACACGCAGGCGGAACTGGACCGGACCCGGCAGGCGCTCAGTCATCTGCGGCTGGATGCCATG GAGATGCGGCTGGCCCTGAACCATCAGGATGCCGCCGGGCAGGATGCGAACCGGCAGGGGTCGTCCCCCCCGGCCGCGCC GCCCGTCCCCGTCACGCCGGCCGCACCGCCGCCGAAGGGACCATCCCGGTGGCGTCGCCTTGCCCGCAGGCTGATCCGGG GGCCTGCTACCCCTGCCCCGGCAAGCGCCGACCGCACGATCCGCACGGTCCTGTTCGTATCCGGCGAACCGGGCACCCCC GGCACGACCTACCGCGTCACGCGCAACGCCGCCGCCTGCGCCGCCGCCGGATACGCGACCCGGTGCAGGGACTGCGCGGC GGTCGGGCCGGACGACATCGCATGGGCCGACATGGTCGTGCTGTGGCGCGTGGAATATAGCGGCCATGTCGACACCTTGC TGGGCCTGGCCCGGGCGCGCGGCGCCGTGCTGGCCTTCGATGCCGATGACATCGTGTTCGAACCCGCCCTGGCGCGCACC GACCTGATCGACGGAATCCGCGTCTGTCCGGCCCCCGTGGCGCGGATCGAACGGATGTATGCCGACATGCAGCGCACCAT GCGCCAGTGCGACCTCGGCCTGGCCACCACCGATACGCTGGCCGACTGGATGCGCCCCTTCCTGAAGCTGACGCTGGTGC TGCCGAACACCTTCGATGACGCGACGCTGCAGCGTGCACGCCACGCCGTCCGCCGGCGGGCGCTGGCCGCGCCCGACGCG GCGGATGACGTCGTGCGGATAGGCTATGCCACCGGATCGCGCACCCACCAGCGCGACTTCGCCCGTGCCCTGCCCGGCCT GCTGCGGGTCATGGACCGACGGGCGCAGGTGCGCCTGGTCCTGTTCCGCGAACCCGGCGGAGGGCGCCCCCTGCTGCTGA TCGAGGAATTTCCCGACCTGCACGCGCGGTCGGCGCAGATCGAATGGCGCGACATGGTGACGCTGGACGCGCTGCCGGAC GAACTGGCGCGGCTGGACATCTCGATTGCCCCGTTGGAGGACGGCAATCCGTTCTGCGAGGCCAAGAGCGAACTGAAATT CTTCGAGGCCGCGCTGGCCGGCGTCTGTACCGTCGCCTCGCCCACCGGGCCGTTTCGCGCCGCCATCCGGCCGGGCGTGA CCGGCCTGCTGGCGGACGGTGCGGCGGAATGGGAAAGCGCGCTGCTGCGTCTGGTGGACGACCCCGCCCTGCGCCGCCGC ATGGCGCGCGACGTGCTGCACACGGTGCTGTGGGAATACGGGCCCCAGCGACAGGCCGCCCTGCTGGGGCCGGCCATCGC CGGGCTGGGCGATGCGCGGGCAGCGGCACGGGTTGGCGCCACCGTCCTGGCACGCGGCGCCTTCCGCGTCCGCGCCATTC CCCGGATCCCCGACAGCACGGTCCTGTTCACCCAGGACCATCTGCAGGACGCCGCCGTCACGGTCGTCGTGACCGCGTAT AATTATGCCGGCCACGTCATCGAGGCCCTGGACTCCGTCCGCCGCCAGACGCTCGACCCGCTGGACCTGATCGTGGTCGA TGATGCCTCGACCGACGATACTCCGTCGCTGCTGACGGGCTGGGCGGCCCGGCATGGCGCACGGTTCAACCGGCTGCTGA TCCTGCGCGCCCGGCGCAATGCCGGGCTGGGCGGCGCGCGCAATATCGGCATGGCGGCGGCCGAAACCCCCTATGTCCTG CAACTGGACGCCGACAACCGCCTGCTGCCCGATGCCTGCGCCCGCCTGCTGGCCGCCATCGCGGCGGAAAGAGCGGGCTA TGCCTATCCCCTGATCCGCCAGTTCGGGCGCGAGGCCAGCGTGATGGGCGATACCCCGTTCCATCCCGGGCGACTGGTCG GCGGCAATACCATCGACGCCATGGCGCTGGTGGCCAAATGGGCTTGGGCCGCCGCCGGCGGCTATTACGTGCGGCGCGAC GCCATGGGGTGGGAGGATTACGACCTGTGGTGCACCCTGGCAGAACTGGGCATCGCCGGTACCCAGGTGCCCGAAATCCT GGCCGAATACCGCGTGCATGACACGGCCATGACCGACACGCTGACCGAACGGCCGCACCACAAGGACGCGGTAGTCACGC TGCTGCGAGACCGCCATCCCTGGATTCGCCTGACGGCCCCCGAGGCACGTGCGCGTTCATGA
Upstream 100 bases:
>100_bases CTCACCCGCTGCCCGGCTGCCCGTCCGGCCGGAACGACAGCGCCATGAAAGCGGGGAGATCTTCCCAAAATATTAATATC CCCGCTGCCAGGATCACAAA
Downstream 100 bases:
>100_bases GCAGGCCGACGGGCGGGATCAGGGGACGTTTCTTTCCAACTCTTCCAGCCATAGCCTGGCATTGCCGTCGGAGGGCGCGC GCCAGTCGCCACGCGGCGAG
Product: glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 953; Mature: 952
Protein sequence:
>953_residues MTRDLLLAEWTTDIPMDADERLSPCPLPEGLRLMGRDALDPYFLVPPELDPDPAINAVLPFLGWIVTLARPRRIGLMPAR KAIAALMADVAHRMRLPADIRALPFQPPPAGFDLLWLDLPPASTPDAALAPTPDQMLQLLGQGGIVVLHGLDSGGWDDLS MATLNLGRGLGVLVGGACRGGSVASLCAMLNRSDDGTAANLAARFAAIGAHWAARRALADTQAELDRTRQALSHLRLDAM EMRLALNHQDAAGQDANRQGSSPPAAPPVPVTPAAPPPKGPSRWRRLARRLIRGPATPAPASADRTIRTVLFVSGEPGTP GTTYRVTRNAAACAAAGYATRCRDCAAVGPDDIAWADMVVLWRVEYSGHVDTLLGLARARGAVLAFDADDIVFEPALART DLIDGIRVCPAPVARIERMYADMQRTMRQCDLGLATTDTLADWMRPFLKLTLVLPNTFDDATLQRARHAVRRRALAAPDA ADDVVRIGYATGSRTHQRDFARALPGLLRVMDRRAQVRLVLFREPGGGRPLLLIEEFPDLHARSAQIEWRDMVTLDALPD ELARLDISIAPLEDGNPFCEAKSELKFFEAALAGVCTVASPTGPFRAAIRPGVTGLLADGAAEWESALLRLVDDPALRRR MARDVLHTVLWEYGPQRQAALLGPAIAGLGDARAAARVGATVLARGAFRVRAIPRIPDSTVLFTQDHLQDAAVTVVVTAY NYAGHVIEALDSVRRQTLDPLDLIVVDDASTDDTPSLLTGWAARHGARFNRLLILRARRNAGLGGARNIGMAAAETPYVL QLDADNRLLPDACARLLAAIAAERAGYAYPLIRQFGREASVMGDTPFHPGRLVGGNTIDAMALVAKWAWAAAGGYYVRRD AMGWEDYDLWCTLAELGIAGTQVPEILAEYRVHDTAMTDTLTERPHHKDAVVTLLRDRHPWIRLTAPEARARS
Sequences:
>Translated_953_residues MTRDLLLAEWTTDIPMDADERLSPCPLPEGLRLMGRDALDPYFLVPPELDPDPAINAVLPFLGWIVTLARPRRIGLMPAR KAIAALMADVAHRMRLPADIRALPFQPPPAGFDLLWLDLPPASTPDAALAPTPDQMLQLLGQGGIVVLHGLDSGGWDDLS MATLNLGRGLGVLVGGACRGGSVASLCAMLNRSDDGTAANLAARFAAIGAHWAARRALADTQAELDRTRQALSHLRLDAM EMRLALNHQDAAGQDANRQGSSPPAAPPVPVTPAAPPPKGPSRWRRLARRLIRGPATPAPASADRTIRTVLFVSGEPGTP GTTYRVTRNAAACAAAGYATRCRDCAAVGPDDIAWADMVVLWRVEYSGHVDTLLGLARARGAVLAFDADDIVFEPALART DLIDGIRVCPAPVARIERMYADMQRTMRQCDLGLATTDTLADWMRPFLKLTLVLPNTFDDATLQRARHAVRRRALAAPDA ADDVVRIGYATGSRTHQRDFARALPGLLRVMDRRAQVRLVLFREPGGGRPLLLIEEFPDLHARSAQIEWRDMVTLDALPD ELARLDISIAPLEDGNPFCEAKSELKFFEAALAGVCTVASPTGPFRAAIRPGVTGLLADGAAEWESALLRLVDDPALRRR MARDVLHTVLWEYGPQRQAALLGPAIAGLGDARAAARVGATVLARGAFRVRAIPRIPDSTVLFTQDHLQDAAVTVVVTAY NYAGHVIEALDSVRRQTLDPLDLIVVDDASTDDTPSLLTGWAARHGARFNRLLILRARRNAGLGGARNIGMAAAETPYVL QLDADNRLLPDACARLLAAIAAERAGYAYPLIRQFGREASVMGDTPFHPGRLVGGNTIDAMALVAKWAWAAAGGYYVRRD AMGWEDYDLWCTLAELGIAGTQVPEILAEYRVHDTAMTDTLTERPHHKDAVVTLLRDRHPWIRLTAPEARARS >Mature_952_residues TRDLLLAEWTTDIPMDADERLSPCPLPEGLRLMGRDALDPYFLVPPELDPDPAINAVLPFLGWIVTLARPRRIGLMPARK AIAALMADVAHRMRLPADIRALPFQPPPAGFDLLWLDLPPASTPDAALAPTPDQMLQLLGQGGIVVLHGLDSGGWDDLSM ATLNLGRGLGVLVGGACRGGSVASLCAMLNRSDDGTAANLAARFAAIGAHWAARRALADTQAELDRTRQALSHLRLDAME MRLALNHQDAAGQDANRQGSSPPAAPPVPVTPAAPPPKGPSRWRRLARRLIRGPATPAPASADRTIRTVLFVSGEPGTPG TTYRVTRNAAACAAAGYATRCRDCAAVGPDDIAWADMVVLWRVEYSGHVDTLLGLARARGAVLAFDADDIVFEPALARTD LIDGIRVCPAPVARIERMYADMQRTMRQCDLGLATTDTLADWMRPFLKLTLVLPNTFDDATLQRARHAVRRRALAAPDAA DDVVRIGYATGSRTHQRDFARALPGLLRVMDRRAQVRLVLFREPGGGRPLLLIEEFPDLHARSAQIEWRDMVTLDALPDE LARLDISIAPLEDGNPFCEAKSELKFFEAALAGVCTVASPTGPFRAAIRPGVTGLLADGAAEWESALLRLVDDPALRRRM ARDVLHTVLWEYGPQRQAALLGPAIAGLGDARAAARVGATVLARGAFRVRAIPRIPDSTVLFTQDHLQDAAVTVVVTAYN YAGHVIEALDSVRRQTLDPLDLIVVDDASTDDTPSLLTGWAARHGARFNRLLILRARRNAGLGGARNIGMAAAETPYVLQ LDADNRLLPDACARLLAAIAAERAGYAYPLIRQFGREASVMGDTPFHPGRLVGGNTIDAMALVAKWAWAAAGGYYVRRDA MGWEDYDLWCTLAELGIAGTQVPEILAEYRVHDTAMTDTLTERPHHKDAVVTLLRDRHPWIRLTAPEARARS
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 103128; Mature: 102996
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRDLLLAEWTTDIPMDADERLSPCPLPEGLRLMGRDALDPYFLVPPELDPDPAINAVLP CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCHHHHHHHH FLGWIVTLARPRRIGLMPARKAIAALMADVAHRMRLPADIRALPFQPPPAGFDLLWLDLP HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEECC PASTPDAALAPTPDQMLQLLGQGGIVVLHGLDSGGWDDLSMATLNLGRGLGVLVGGACRG CCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCC GSVASLCAMLNRSDDGTAANLAARFAAIGAHWAARRALADTQAELDRTRQALSHLRLDAM CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMRLALNHQDAAGQDANRQGSSPPAAPPVPVTPAAPPPKGPSRWRRLARRLIRGPATPAP HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC ASADRTIRTVLFVSGEPGTPGTTYRVTRNAAACAAAGYATRCRDCAAVGPDDIAWADMVV CCCCCEEEEEEEEECCCCCCCCEEEEECCCHHHHHHCHHHHHHHHHCCCCCCHHHHCEEE LWRVEYSGHVDTLLGLARARGAVLAFDADDIVFEPALARTDLIDGIRVCPAPVARIERMY EEEEECCCCHHHHHHHHHHCCCEEEECCCCCEECCHHHHHHHHCCCCCCCHHHHHHHHHH ADMQRTMRQCDLGLATTDTLADWMRPFLKLTLVLPNTFDDATLQRARHAVRRRALAAPDA HHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC ADDVVRIGYATGSRTHQRDFARALPGLLRVMDRRAQVRLVLFREPGGGRPLLLIEEFPDL CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCC HARSAQIEWRDMVTLDALPDELARLDISIAPLEDGNPFCEAKSELKFFEAALAGVCTVAS CCCCCCEEHHHEEEECCCHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECC PTGPFRAAIRPGVTGLLADGAAEWESALLRLVDDPALRRRMARDVLHTVLWEYGPQRQAA CCCCCHHHHCCCCCEEHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHH LLGPAIAGLGDARAAARVGATVLARGAFRVRAIPRIPDSTVLFTQDHLQDAAVTVVVTAY HHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHCCCCEEEEEEEEH NYAGHVIEALDSVRRQTLDPLDLIVVDDASTDDTPSLLTGWAARHGARFNRLLILRARRN HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCC AGLGGARNIGMAAAETPYVLQLDADNRLLPDACARLLAAIAAERAGYAYPLIRQFGREAS CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC VMGDTPFHPGRLVGGNTIDAMALVAKWAWAAAGGYYVRRDAMGWEDYDLWCTLAELGIAG CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCC TQVPEILAEYRVHDTAMTDTLTERPHHKDAVVTLLRDRHPWIRLTAPEARARS CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCHHCCCC >Mature Secondary Structure TRDLLLAEWTTDIPMDADERLSPCPLPEGLRLMGRDALDPYFLVPPELDPDPAINAVLP CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCHHHHHHHH FLGWIVTLARPRRIGLMPARKAIAALMADVAHRMRLPADIRALPFQPPPAGFDLLWLDLP HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEECC PASTPDAALAPTPDQMLQLLGQGGIVVLHGLDSGGWDDLSMATLNLGRGLGVLVGGACRG CCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCC GSVASLCAMLNRSDDGTAANLAARFAAIGAHWAARRALADTQAELDRTRQALSHLRLDAM CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMRLALNHQDAAGQDANRQGSSPPAAPPVPVTPAAPPPKGPSRWRRLARRLIRGPATPAP HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC ASADRTIRTVLFVSGEPGTPGTTYRVTRNAAACAAAGYATRCRDCAAVGPDDIAWADMVV CCCCCEEEEEEEEECCCCCCCCEEEEECCCHHHHHHCHHHHHHHHHCCCCCCHHHHCEEE LWRVEYSGHVDTLLGLARARGAVLAFDADDIVFEPALARTDLIDGIRVCPAPVARIERMY EEEEECCCCHHHHHHHHHHCCCEEEECCCCCEECCHHHHHHHHCCCCCCCHHHHHHHHHH ADMQRTMRQCDLGLATTDTLADWMRPFLKLTLVLPNTFDDATLQRARHAVRRRALAAPDA HHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC ADDVVRIGYATGSRTHQRDFARALPGLLRVMDRRAQVRLVLFREPGGGRPLLLIEEFPDL CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCC HARSAQIEWRDMVTLDALPDELARLDISIAPLEDGNPFCEAKSELKFFEAALAGVCTVAS CCCCCCEEHHHEEEECCCHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECC PTGPFRAAIRPGVTGLLADGAAEWESALLRLVDDPALRRRMARDVLHTVLWEYGPQRQAA CCCCCHHHHCCCCCEEHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHH LLGPAIAGLGDARAAARVGATVLARGAFRVRAIPRIPDSTVLFTQDHLQDAAVTVVVTAY HHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHCCCCEEEEEEEEH NYAGHVIEALDSVRRQTLDPLDLIVVDDASTDDTPSLLTGWAARHGARFNRLLILRARRN HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCC AGLGGARNIGMAAAETPYVLQLDADNRLLPDACARLLAAIAAERAGYAYPLIRQFGREAS CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC VMGDTPFHPGRLVGGNTIDAMALVAKWAWAAAGGYYVRRDAMGWEDYDLWCTLAELGIAG CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCC TQVPEILAEYRVHDTAMTDTLTERPHHKDAVVTLLRDRHPWIRLTAPEARARS CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]