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The map label for this gene is rsmI [H]

Identifier: 161870958

GI number: 161870958

Start: 2092731

End: 2093549

Strand: Reverse

Name: rsmI [H]

Synonym: NMCC_2053

Alternate gene names: 161870958

Gene position: 2093549-2092731 (Counterclockwise)

Preceding gene: 161870966

Following gene: 161870957

Centisome position: 97.22

GC content: 55.92

Gene sequence:

>819_bases
GTGGTTGCCACGCCCATCGGCAATTTGGCGGACATTACCCTGCGCGCTTTGGCGGTATTGCAAAAGGCGGACATCATCTG
TGCCGAAGATACGCGCGTTACCGCGCAGCTTTTGAGCGCGTACGGCATTCAGGGCAAACTTGTCAGCGTGCGCGAACACA
ACGAACGGCAGATGGCGGACAAGATTGTCGGCTATCTTTCAGACGGCATGGTTGTGGCACAGGTTTCCGATGCGGGTACG
CCGGCCGTATGCGACCCGGGTGCCAAACTCGCCGGCCGCGTGCGTGAGGCCGGGTTTAAAGTCGTTCCCGTCGTGGGCGC
AAGCGCGGTGATGGCGGCTTTGAGCGTGGCCGGTGTGGAAGGATCCGATTTTTATTTCAACGGTTTTGTACCGCCGAAAT
CGGGAGAACGCAGGAAACTGTTTGCCAAATGGGTGCGGGCGGCATTTCCTATCGTCATGTTTGAAACGCCACACCGAATC
GGGGCAACGCTTGCCGATATGGTGGAATTGTTCTCCGAACGCCGATTAATGCTGGCGCGCGAAATTACGAAAACGTTTGA
AACGTTCTTAAGCGGCACGGTTGGGGAAATTCAGACGGCATTGTCTGCCGACGGCAACCAATCGCGCGGTGAGATGGTGT
TGGTGCTTTATCCGGCGCAGGATGAAAAACACGAAGGCTTGTCCGAGTCCGCGCAAAACATCATGAAAATCCTCACAGCC
GAGCTGCCGACCAAACAGGCGGCGGAGCTTGCCGCCAAAATCACGGGCGAGGGAAAAAAAGCTTTGTACAATCTGGCACT
GTCTTGGAAAAACAAATAG

Upstream 100 bases:

>100_bases
TCGGTTTAACCTTTATAATGTTTGTTTTTCAGACGGCATTCTTATGTTTCAGAAACATTTGCAGAAAGCCTCCGACAGCG
TCGTCGGAGGGACATTATAC

Downstream 100 bases:

>100_bases
TGCCGGACGAGCCGGCACCATAGTGTGAACGGAATCAGCGGACACGACCCGTCATGCGGCACAGAACATCTCTACCCTGA
ACACGGTGGGCGACGACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MVATPIGNLADITLRALAVLQKADIICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGT
PAVCDPGAKLAGRVREAGFKVVPVVGASAVMAALSVAGVEGSDFYFNGFVPPKSGERRKLFAKWVRAAFPIVMFETPHRI
GATLADMVELFSERRLMLAREITKTFETFLSGTVGEIQTALSADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTA
ELPTKQAAELAAKITGEGKKALYNLALSWKNK

Sequences:

>Translated_272_residues
MVATPIGNLADITLRALAVLQKADIICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGT
PAVCDPGAKLAGRVREAGFKVVPVVGASAVMAALSVAGVEGSDFYFNGFVPPKSGERRKLFAKWVRAAFPIVMFETPHRI
GATLADMVELFSERRLMLAREITKTFETFLSGTVGEIQTALSADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTA
ELPTKQAAELAAKITGEGKKALYNLALSWKNK
>Mature_272_residues
MVATPIGNLADITLRALAVLQKADIICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGT
PAVCDPGAKLAGRVREAGFKVVPVVGASAVMAALSVAGVEGSDFYFNGFVPPKSGERRKLFAKWVRAAFPIVMFETPHRI
GATLADMVELFSERRLMLAREITKTFETFLSGTVGEIQTALSADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTA
ELPTKQAAELAAKITGEGKKALYNLALSWKNK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=270, Percent_Identity=45.1851851851852, Blast_Score=205, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29212; Mature: 29212

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATPIGNLADITLRALAVLQKADIICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMAD
CCCCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
KIVGYLSDGMVVAQVSDAGTPAVCDPGAKLAGRVREAGFKVVPVVGASAVMAALSVAGVE
HHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCC
GSDFYFNGFVPPKSGERRKLFAKWVRAAFPIVMFETPHRIGATLADMVELFSERRLMLAR
CCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
EITKTFETFLSGTVGEIQTALSADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTA
HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
ELPTKQAAELAAKITGEGKKALYNLALSWKNK
CCCCHHHHHHHHHHCCCCHHHHHHHHEECCCC
>Mature Secondary Structure
MVATPIGNLADITLRALAVLQKADIICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMAD
CCCCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
KIVGYLSDGMVVAQVSDAGTPAVCDPGAKLAGRVREAGFKVVPVVGASAVMAALSVAGVE
HHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCC
GSDFYFNGFVPPKSGERRKLFAKWVRAAFPIVMFETPHRIGATLADMVELFSERRLMLAR
CCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
EITKTFETFLSGTVGEIQTALSADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTA
HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
ELPTKQAAELAAKITGEGKKALYNLALSWKNK
CCCCHHHHHHHHHHCCCCHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]