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The map label for this gene is 161870946

Identifier: 161870946

GI number: 161870946

Start: 2084031

End: 2085248

Strand: Direct

Name: 161870946

Synonym: NMCC_2040

Alternate gene names: NA

Gene position: 2084031-2085248 (Clockwise)

Preceding gene: 161870935

Following gene: 161870951

Centisome position: 96.78

GC content: 56.08

Gene sequence:

>1218_bases
ATGCAACGTCGTATTATAACCCTGCTCTGCGCGGCAGGTATGGCATTCTCAACACAAACTTTGGCGGCAAATTTGGAGGT
GCGCCCGAACGCGCCGGAACGCTACACGGTCAAACAGGGCGACACCCTGTGGGGCATTTCGGGCAAATACCTGTACAGCC
CGTGGCAATGGGGCCGCCTGTGGGACGCGAACCGGGATCAAATCCACAATCCCGACCTGATTTATCCGGACCAGGTATTG
GTGTTGCGCCACGTTGACGGCGAACCGCGCCTCGGCTTGGAACAGACAGACGGCATCCCCGTCGTCAAAATGAGTCCAGA
TAAGGAAGTGTCCGGATACGGTATTCCCGCCATCGATGTCAACTTCTACCGCATCTTTATGCGGCACCCGCAAATCGTTT
CCCGCAAAGAAACCGCTGCCGCGCCGCGCCTGCTCTCGGGCCCGGAAGGCAGGCTGCTGTACACCAAAGGCACCAGGGTT
TACACCAAAGGCCTGAAAGAGCCGGGCCGCTACCTGACCTACCGAATCAATAAAAACATCACCGATCCGGATACGGGTAA
ATTCCTCGGGCGGGAAGTCGCATTCAGCGGCATCGTGCGCTCCCTCGACTATACCGACTCTGTCCTCGAACAACGCTCGA
AACAGGCTGGAGAACGGCCGAAAGACAACGAATACCATACCCGCATCCATCCTTTGATTACCCCGCTGCGCACCCCTTCG
ATACAGCCGCTGGTGGTCGAAACCGCCATTTCCGAAATACAGCAGGGCGACTACCTGATGAAAATGCCGGAAGACACCGA
CCGCTTCAACATGATGCCGCACGAACCGTCCCGCCCGGTTCAGGCTAAAATCGTTTCCGTGTTCGAAGGTACAAGGATTG
CCGGCCAGTTTCAAACCATCACCATCGACAAAGGCGAGGCGGACGGTTTGGACAAAGGCACGGTTTTGAGCCTCTACAAA
CGCAAGAAAACGATGCAGGTCGACCTCTCCAACAATTTCAAAAGCAGGGATACCGTCGAACTGATTTCCACTCCTGCCGA
AGAAGTGGGCTTGGCAATGGTTTACCGCACCTCCGAACACCTGTCGTCCGCCATCATTTTGGAAAACATCTCCGATATTT
CCGTAGGCGACACCGCCGCCAATCCGGGACGCGATTTGGACAATATACCGGATCAGGGCCGCAGCCGCGTGAAGTTTGGC
TTCAACCGCTCCGAATAA

Upstream 100 bases:

>100_bases
AACATTTTTTATCACGCGGCACATCCCGAGGGGCTGCCGCCGCTTTTTCCAACCCAATCAAGCAAGACAAACCGAAATTT
ATCAGATAAGGGGAACGGTT

Downstream 100 bases:

>100_bases
TTAATCATCCGACAAAAATGCCGTCTGAAACACCTTCCGTTTCAGACGGCATTTTTCCATCTTCAATAAAATATCCGTTT
GGACTTTTCCGATGTTTTTG

Product: periplasmic protein

Products: NA

Alternate protein names: LysM Domain Protein; Cell Wall Degradation; LysM Motif-Containing Protein; Protein Containing LysM Domain; Signal Peptide Protein; LysM Family Cell Wall Degradation Protein; Lysin Domain-Containing Protein; Signal Peptide Protein LysM Domain Protein; Secreted Protein

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLWGISGKYLYSPWQWGRLWDANRDQIHNPDLIYPDQVL
VLRHVDGEPRLGLEQTDGIPVVKMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
YTKGLKEPGRYLTYRINKNITDPDTGKFLGREVAFSGIVRSLDYTDSVLEQRSKQAGERPKDNEYHTRIHPLITPLRTPS
IQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEPSRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYK
RKKTMQVDLSNNFKSRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQGRSRVKFG
FNRSE

Sequences:

>Translated_405_residues
MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLWGISGKYLYSPWQWGRLWDANRDQIHNPDLIYPDQVL
VLRHVDGEPRLGLEQTDGIPVVKMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
YTKGLKEPGRYLTYRINKNITDPDTGKFLGREVAFSGIVRSLDYTDSVLEQRSKQAGERPKDNEYHTRIHPLITPLRTPS
IQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEPSRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYK
RKKTMQVDLSNNFKSRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQGRSRVKFG
FNRSE
>Mature_405_residues
MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLWGISGKYLYSPWQWGRLWDANRDQIHNPDLIYPDQVL
VLRHVDGEPRLGLEQTDGIPVVKMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
YTKGLKEPGRYLTYRINKNITDPDTGKFLGREVAFSGIVRSLDYTDSVLEQRSKQAGERPKDNEYHTRIHPLITPLRTPS
IQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEPSRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYK
RKKTMQVDLSNNFKSRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQGRSRVKFG
FNRSE

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45607; Mature: 45607

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLWGISGKYLYSPWQWGRL
CCCCEEEHHHHCCCCEECEEEEEEEEECCCCCCEEEEECCCEEECCCCCEEECCCCCCCC
WDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVVKMSPDKEVSGYGIPAIDV
CCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEH
NFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRVYTKGLKEPGRYLTYRINKNI
HEEEEEECCCHHHCCCHHHHCCHHHCCCCCCEEEECCCEEEECCCCCCCCEEEEEECCCC
TDPDTGKFLGREVAFSGIVRSLDYTDSVLEQRSKQAGERPKDNEYHTRIHPLITPLRTPS
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCC
IQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEPSRPVQAKIVSVFEGTRIAGQFQTI
CCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECEEEEE
TIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFKSRDTVELISTPAEEVGLAMVYRTSEH
EEECCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCHHHHCEEEEEECHHH
LSSAIILENISDISVGDTAANPGRDLDNIPDQGRSRVKFGFNRSE
HHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLWGISGKYLYSPWQWGRL
CCCCEEEHHHHCCCCEECEEEEEEEEECCCCCCEEEEECCCEEECCCCCEEECCCCCCCC
WDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVVKMSPDKEVSGYGIPAIDV
CCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEH
NFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRVYTKGLKEPGRYLTYRINKNI
HEEEEEECCCHHHCCCHHHHCCHHHCCCCCCEEEECCCEEEECCCCCCCCEEEEEECCCC
TDPDTGKFLGREVAFSGIVRSLDYTDSVLEQRSKQAGERPKDNEYHTRIHPLITPLRTPS
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCC
IQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEPSRPVQAKIVSVFEGTRIAGQFQTI
CCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECEEEEE
TIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFKSRDTVELISTPAEEVGLAMVYRTSEH
EEECCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCHHHHCEEEEEECHHH
LSSAIILENISDISVGDTAANPGRDLDNIPDQGRSRVKFGFNRSE
HHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA