Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 161870928

GI number: 161870928

Start: 2066892

End: 2067338

Strand: Reverse

Name: nusG [H]

Synonym: NMCC_2018

Alternate gene names: 161870928

Gene position: 2067338-2066892 (Counterclockwise)

Preceding gene: 161870929

Following gene: 161870927

Centisome position: 96.0

GC content: 43.85

Gene sequence:

>447_bases
ATGGGAGATTATTTCGGACAAATTCTGGTGCCTGTAGAGAAAGTTGTTGATATCCGCAATGGTCGTAAGACTATTAGTGA
AAGAAAGTCATATCCTGGTTATGTGCTAGTTGAGATGGAAATGACAGATGACTCTTGGCATCTTGTAAAAAGCACCCCCC
GTGTTTCCGGTTTTATTGGAGGGAGGGCTAATAGACCCATGCCGATTAGTCAGAGAGAGGCTGAAATTATTTTACAGCAG
GTTCAGACCGGCATAGAGAAGCCGAAACCAAAAGTTGAATTTGAGGTCGGTCAACAGGTTCGTGTAAATGAAGGGCCGTT
TGCGGATTTCAACGGTGTGGTTGAGGAGGTCAATTATGAACGGAATAAGTTACGCGTGTCTGTTCAGATATTTGGTAGAG
AAACACCCGTTGAGCTGGAGTTCAGCCAGGTTGAAAAGATTAACTGA

Upstream 100 bases:

>100_bases
GAAGGTTGAGATGTCGAAAAAATGGTATGTTGTACAGGCGTATTCGGGGTTTGAGAAGAATGTCCAACGAATATTGGAAG
AGCGCATTGCCCGTGAGGAG

Downstream 100 bases:

>100_bases
TTTTTATACTTGAAAAAAAAGCAATAAGAGGATAAAATCAAAAATTAACTTGGGGAGCGGAAATGGTTCCGCGTCTTACC
CGTTTTTAGGAGTCCGTTAA

Product: transcription antitermination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MGDYFGQILVPVEKVVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPMPISQREAEIILQQ
VQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQIFGRETPVELEFSQVEKIN

Sequences:

>Translated_148_residues
MGDYFGQILVPVEKVVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPMPISQREAEIILQQ
VQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQIFGRETPVELEFSQVEKIN
>Mature_147_residues
GDYFGQILVPVEKVVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPMPISQREAEIILQQV
QTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQIFGRETPVELEFSQVEKIN

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=146, Percent_Identity=63.013698630137, Blast_Score=195, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 16911; Mature: 16779

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDYFGQILVPVEKVVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIG
CCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCEEEEC
GRANRPMPISQREAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYE
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCHHHHHHHCCCC
RNKLRVSVQIFGRETPVELEFSQVEKIN
CCEEEEEEEEECCCCCCEEEHHHHCCCC
>Mature Secondary Structure 
GDYFGQILVPVEKVVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIG
CCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCEEEEC
GRANRPMPISQREAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYE
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCHHHHHHHCCCC
RNKLRVSVQIFGRETPVELEFSQVEKIN
CCEEEEEEEEECCCCCCEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]