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The map label for this gene is gapA1 [H]

Identifier: 161870854

GI number: 161870854

Start: 1994646

End: 1995677

Strand: Direct

Name: gapA1 [H]

Synonym: NMCC_1941

Alternate gene names: 161870854

Gene position: 1994646-1995677 (Clockwise)

Preceding gene: 161870852

Following gene: 161870856

Centisome position: 92.63

GC content: 57.07

Gene sequence:

>1032_bases
ATGGGCATTAAAGTCGCCATCAACGGCTACGGACGCATCGGCCGCCAGGTTTTGCGCGCCATCTACGATTATCAGATTCA
AGACCAACTCCAAATCGTCGCCGTCAACGCCAGCGGCAGCCTTGAAACCAACGCCCACCTCACCAAATTCGACACCGTGC
ACGGACGCTTTGAAGCCGACGTATCCCACGACGGCGGCAACCTCATCGTCAACGGCGACAAAATCCCCTTCTTCTCGACC
CGCAACCCTGCCGAACTGCCGTGGAAAGAACTCGGTGTCGATTTGGTCATGGAATGCACCGGCGCGTTCACCAGCAAAGA
AAAAGCCAAAATCCACCTCGAAAGCGGTGCGAAAAAAGTCCTCATTTCCGCACCGGGCGGCGACGATGTCGATGCAACCG
TCGTGTACGGCGTGAACGACAGCATCCTAACCGCCGACATGACCGTCGTTTCCAACGCTTCCTGCACCACCAACTGCCTC
TCGCCGGTTGCCAAAGTGTTGAGCGAAAGCGTCGGCATCGTCAAAGGCGCGATGACCACCATCCACGCGCTGACCAACGA
CCAAACCGTTACCGACGTGCGCCACAAAGACCTGCGCCGCGCCCGCAGCGGCGTGGAAAACATGATTCCGACCAAAACCG
GCGCGGCAAAAGCCGTCGGACTGGTACTGCCCGAATTGAAAGGCAGACTCGACGGGCTTGCCATCCGCGTGCCGACCGTC
AACGTATCATTGGTAGATTTGAGCTTCCAAGCCGCGCGCGACACGACAATCGAAGAAATCAACGCACTGATGAAAGCCGC
CTCGGAAGCAGGCGCGCTCAAAGGCGTTTTAGGCTACAACACCCTGCCCTTGGTTTCCATGGACTTCAACCACACCACCG
AAGCCAGCCACTTCGACGCAACGCTGACCAAAGTTGTTGACGGCAACATGGTCAAAGTGTTCGCTTGGTATGACAACGAA
TGGGGCTTCAGCTGCCAAATGCTGAACACCGCACGCCGTATGTTCGGACTTGAAGTGCGCCCACTCAAATAA

Upstream 100 bases:

>100_bases
CGGCCGCGCTGTTTTCAATAAAATATTAATTACACGCCACTACAAATTTGCTATAATCCGCCCCGAAAATCTACCCAACC
CCTCAACAAAGGAACAAACC

Downstream 100 bases:

>100_bases
GCAACAAACCGTCAAACAAAATGCCGTCTGAAACCCGATGTTTTCAAGTTCCAGACGGCATTTTTCACCGTGATTTTACC
CGGCTGTCGTCATTTCCAAT

Product: glyceraldehyde 3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETNAHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFST
RNPAELPWKELGVDLVMECTGAFTSKEKAKIHLESGAKKVLISAPGGDDVDATVVYGVNDSILTADMTVVSNASCTTNCL
SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKAVGLVLPELKGRLDGLAIRVPTV
NVSLVDLSFQAARDTTIEEINALMKAASEAGALKGVLGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMVKVFAWYDNE
WGFSCQMLNTARRMFGLEVRPLK

Sequences:

>Translated_343_residues
MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETNAHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFST
RNPAELPWKELGVDLVMECTGAFTSKEKAKIHLESGAKKVLISAPGGDDVDATVVYGVNDSILTADMTVVSNASCTTNCL
SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKAVGLVLPELKGRLDGLAIRVPTV
NVSLVDLSFQAARDTTIEEINALMKAASEAGALKGVLGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMVKVFAWYDNE
WGFSCQMLNTARRMFGLEVRPLK
>Mature_342_residues
GIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETNAHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTR
NPAELPWKELGVDLVMECTGAFTSKEKAKIHLESGAKKVLISAPGGDDVDATVVYGVNDSILTADMTVVSNASCTTNCLS
PVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKAVGLVLPELKGRLDGLAIRVPTVN
VSLVDLSFQAARDTTIEEINALMKAASEAGALKGVLGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMVKVFAWYDNEW
GFSCQMLNTARRMFGLEVRPLK

Specific function: Could Play A Role In Pyridoxal 5'-Phosphate Synthesis. [C]

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7669492, Length=334, Percent_Identity=44.0119760479042, Blast_Score=282, Evalue=4e-76,
Organism=Homo sapiens, GI7657116, Length=336, Percent_Identity=42.2619047619048, Blast_Score=259, Evalue=2e-69,
Organism=Escherichia coli, GI1789295, Length=340, Percent_Identity=44.4117647058823, Blast_Score=318, Evalue=2e-88,
Organism=Escherichia coli, GI1788079, Length=331, Percent_Identity=48.9425981873112, Blast_Score=293, Evalue=1e-80,
Organism=Caenorhabditis elegans, GI17534677, Length=333, Percent_Identity=45.6456456456456, Blast_Score=273, Evalue=1e-73,
Organism=Caenorhabditis elegans, GI17534679, Length=333, Percent_Identity=44.7447447447448, Blast_Score=270, Evalue=6e-73,
Organism=Caenorhabditis elegans, GI17568413, Length=333, Percent_Identity=44.7447447447448, Blast_Score=269, Evalue=2e-72,
Organism=Caenorhabditis elegans, GI32566163, Length=333, Percent_Identity=44.7447447447448, Blast_Score=269, Evalue=2e-72,
Organism=Saccharomyces cerevisiae, GI6322468, Length=329, Percent_Identity=46.5045592705167, Blast_Score=296, Evalue=2e-81,
Organism=Saccharomyces cerevisiae, GI6321631, Length=331, Percent_Identity=46.5256797583082, Blast_Score=293, Evalue=3e-80,
Organism=Saccharomyces cerevisiae, GI6322409, Length=329, Percent_Identity=46.2006079027356, Blast_Score=291, Evalue=8e-80,
Organism=Drosophila melanogaster, GI85725000, Length=334, Percent_Identity=47.9041916167665, Blast_Score=286, Evalue=1e-77,
Organism=Drosophila melanogaster, GI22023983, Length=334, Percent_Identity=47.9041916167665, Blast_Score=286, Evalue=1e-77,
Organism=Drosophila melanogaster, GI17933600, Length=334, Percent_Identity=47.0059880239521, Blast_Score=282, Evalue=2e-76,
Organism=Drosophila melanogaster, GI18110149, Length=334, Percent_Identity=47.0059880239521, Blast_Score=282, Evalue=2e-76,
Organism=Drosophila melanogaster, GI19922412, Length=328, Percent_Identity=44.2073170731707, Blast_Score=271, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006424
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.12 [H]

Molecular weight: Translated: 36966; Mature: 36835

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00071 GAPDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETNAHLTKFDTVHGRFEAD
CCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEE
VSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGAFTSKEKAKIHLESGAKKV
ECCCCCEEEECCCCCCEECCCCCCCCCHHHHCHHHEEHHHCCCCCCCCEEEEEECCCCEE
LISAPGGDDVDATVVYGVNDSILTADMTVVSNASCTTNCLSPVAKVLSESVGIVKGAMTT
EEECCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHE
IHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKAVGLVLPELKGRLDGLAIRVPTV
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEE
NVSLVDLSFQAARDTTIEEINALMKAASEAGALKGVLGYNTLPLVSMDFNHTTEASHFDA
EEEEEEEEEHHHCCCHHHHHHHHHHHHHHHCCHHHECCCCCCEEEEECCCCCCCCCHHHH
TLTKVVDGNMVKVFAWYDNEWGFSCQMLNTARRMFGLEVRPLK
HHHHHCCCCEEEEEEEECCCCCEEEHHHHHHHHHHCCEEECCC
>Mature Secondary Structure 
GIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETNAHLTKFDTVHGRFEAD
CEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEE
VSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGAFTSKEKAKIHLESGAKKV
ECCCCCEEEECCCCCCEECCCCCCCCCHHHHCHHHEEHHHCCCCCCCCEEEEEECCCCEE
LISAPGGDDVDATVVYGVNDSILTADMTVVSNASCTTNCLSPVAKVLSESVGIVKGAMTT
EEECCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHE
IHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKAVGLVLPELKGRLDGLAIRVPTV
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEE
NVSLVDLSFQAARDTTIEEINALMKAASEAGALKGVLGYNTLPLVSMDFNHTTEASHFDA
EEEEEEEEEHHHCCCHHHHHHHHHHHHHHHCCHHHECCCCCCEEEEECCCCCCCCCHHHH
TLTKVVDGNMVKVFAWYDNEWGFSCQMLNTARRMFGLEVRPLK
HHHHHCCCCEEEEEEEECCCCCEEEHHHHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7763137 [H]